CI01000095_03598784_03614858


Basic Information

Item Value
gene id CI01000095_03598784_03614858
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 3598439 ~ 3614858 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000095_03598784_03614858.mRNA
ATGGACGACGTAGAAGGTTTAAAAGATGGAGAGTTTTCTCCAAGAAGCAGATCAAGAAAGCGATCAAAATCAGTCTCTTCAGAATCCAGCTTCCTGTCTTTGAAAAGCAACCATTCTATTGTTGACCCTCCAAACTTAAAAGATGGCATAATGTCACCTGAATGCAGACAAATTACTGTAAGAGCAGGAAAGAGATCAAGATCAGTCTCTACAGCACCTAGCTGCCTGTCTATGAAAAGCAACATGTCTATTGTTGATCCACCCAACTTAAAAGATGACAGAACATCACCTGGAGAAAGCTCAAACCCTTTCTTAATCAGCATGCTGTCCGTCAGGAATAACTGGTCTATAGATACATCTGACATGGAGAAAGAGGGACCCATGGTACCACAACAAAGCTTTGAATCTAAACATGATGGGACATCTGTTTTAGAGAAATTCAAATCAAATATGCAAGAGAAATTTCATTGTTTGCATGAGGGAACAGCAAATCAGGGAAACCTAAGAGTCCTCAGTGAGATATACACAAAGGTCTACATCACAGAGGATGGAGGTGGAGAAGTCAGTAATGAACATGATATCAGACAGGTTGAAACAGCATTTAGGAGAGCAACAACAGAAGAAACACCAATCAACCTAAATGACATCTTCAAACCATTACCTGGACAAGACAAACCCATCAGAACTGTGTTGACTAAAGGAATTGCTGGCATTGGAAAAACAGTCTCTGTGCAGAAGTTCATTTTGGACTGGGCTGAAGGGAAAGCGAATCAGGACGTTCACCTCATATTTCTACTTCCTTTCAGAGAACTCAATTTTATGAAGAATCAAAGTCTCAGTCTCTTGGGACTTATTAATATATTTTTCATTGAAACAAAACAATTGGAAATATACCGTGATAAATATAATGTTAACTTTATTTTGGATGGTTTGGATGAGTGTCGTCTGTCTCTGGATTTTCAGAACAACGTGAGGTTGTGTGATGTGACTGAATCAGCTTCAGTGGACGTGCTGCTGACAAACCTCATTATGGGGAATCTGCTTCCCTCTGCTCTCATCTGGATCACCTCCAGACCAGCAGCAGCTGATCTCATCCCCTCTGAGAGTGTTGATCGAGTGACAGAGGTACGAGGCTTCAATGACCAACAGAAGGAAGAATACTTCAGGAAGAGAATCACTGATCAGAGTCTGGCTGATAAAATCATCTCACATCTGAAGTCATCGAGGAGCCTCTACATCATGTGCCACATCCCAGTGTTCTGCTGGATCTCAGCCACTGTCCTAGAGAAGATGTTGAGTGGAGCAGAGAGTGGAGAGATTCCCAAGACTCTGACTCAAATGTACACTGACTTCCTGATCCTTCAGACCAACATCAAACATGAAAAGGACTATGAGATGAAAGTAAATGATGAAGACATGATTCTTAAACTGGGGAAACTGGCTTTCCAGCAGCTTATGGAAGGCAATCTGATCTTCTATGAAGAAGATCTGAGAGAGTGTGACATTGATGTGACAGAAGCATCAGTGTACTCAGGATTGTTTACTCAGATCTTCAGAGAGGAGTTTGGACTTTGTCAGAAGAAAGTCTACTGCTTTGTTCATCTGACTATGCAGGAACATCTGGCAGCCCTGTATGTGTATGTCTCCTTCATGAACAATAAGATAAATGTATTTGATCAAAATACCACACCATCTTTGTTATCAAATTCAGGAACTTTTCTATCTGACCTGCTTAAAATTGCTGTTGATAAAGCCCTGGCCAGTGTAAATGGACATCTGGATATATTCCTCCGTTTTCTTCTGGGCCTCTCATTGGAGTCCAGTCAGACTCTCTTAAAAGGCCTTCTCAAACAACCAGGAAGTAGCTCCCGATGCATAGAGAAAACCATTAAGTACATTAAAAACAAGATCATGGGCAATCTTTCTCCAGAGAAGTCCATCAACCTGTTCCACTGTCTGAATGAACTGGGTGACCATTCTCTTATAAAGGAAGTTCAGCATTTTCTTAGTTCTGGAACAATAAGAGGAGCAAGACTTTCACCATCACAGTGGTCAGCTGTCGCCTTTGTGTTGCTGACCTCAGCGGAGCTGGATGTGTTTCACATGAGCAAGTATGCCAGAATGTGCAGTGACATTGATGAAGTTCTTGTGAGGCTGCTGCCTGTGATTGAAGCATCTAAAACAGCCCATTCAAAAAGCTCCTGTCTTAAGGAGCTGAACTTGAATGGGAATGGACTTCAAGATGAAGGAGCAACAGATCTCTTTTCTGGTCTGGAAAGTCCGCATTGTAAACTTGAGATACTGAGGCTTGCAAACTGTAAACTGACAGACAAAAGCTGTTCTGTTTTGGCTGTTGCATGTAAAACAAAATTCTCGAGCTTGAAAGAGCTCAGCCTGAATTGCAATAACCTGCAGGACGCAGGAGTAAAGCATCTTGCTGCTGGATTGCAGAGTCTGTACTGTAAACTGGAGATACTTAAGCTATGTAAGTGTGGCTTTACTGATGAAGGTTGTGCTGCTCTGGCCTTAGCTTTGAATTCTAACCCTTCCCACCTGAGAGAAGCTTATCTGGATAAGAATGAGCTTGGAGACAAAGGAATTAATCTGCTTTCAGAGGCATTGAAGAATCCTTGCTGTAAACTGGAGATACTGGGTATGATTAGATGTGGTGTGACAGATAAAGGTTGTGCTGCTCTGGCATCAGCTTTGACATCAAACTCAACATGCCTGAGAGAACTGGATTTATCTGAGAATAAACTAGGAGACTCAGGAGTGAAGAAGCTCTCTGGTGGGCTTGCGAATCCTCACTGCAAGCTGAAAACACTAAGGCTGATGTATTGTGGGATCACTCAAGAAGGTTGTGCAGCTCTGACTTCATCTCTGAGATCATCACACATCAAAGAACTGGATCTGTCTGGAAATAAGCTTGGAGATTTGGGCGTGAAGCAGCTCTCAGCTGGACAGCAAAATCCTTTCTGTAATATTGAGATACTAAAACTGATGTATTGTGGGGTCACAGATGAAGGTTGTACTGCTCTAGCTTCAGTTATGAAATCAAATGCAACAGATCTAAAAGAGCTCTATCTTGATAAGAACGAGCTCAGTGATTCAGGAGTGAAGGTACTCTCTGCTGCTCTGGAGCATCCTTGCTGTAAACTGGAGACATTAAAGCTGTGGGATTGTGGTATCACAGATGAAGGTTGTGCTGCTCTGGCTTCAGCTCTGAGATCAAACCCCTCACATTTAAGAAATCTTTATCTATTCGGGAATAAACTCAGGCACTCAGCGGTGAATCTGCTCTCTACCCTAAGTGATGATCCACAAAACAAATTGGAGAATTTTGAGGCTTGCACTGCTCGGTGTCTGGGGATTAAAATCTTCCATTTCTTCAGCGATGATAACACTTCTCTTGATTACTACAAAACAGAGAAATATTAAAAGCAATTTATGTTATGTGAAATAATCACTTATTCCTGTGCATCTTAACATGCTGAGTGAAGAAGCAACTAGTAGCAACAAAAGCTGTGATGCTGTGTTTGTGTTGTCCATGTTTTAGCAGTCATGAGCATCTGTAAATGTAAAATCTGCTTACGTTTAGCAGCTGAAGATGATCTCAGACATACTAATGCATAGGATTGCAGTACATTCTCGTAACAAAAAATCAGTGAAACTAGCTTATGTAACTAGCTTATGTATTTAGTTAATTGAGGTTATTTGAAAACAATGATCTTCTATGATAAACAAATCCTCTTCACTCACCTTCTTGAAGAAACATGGAATAAA

Function

NR:

description
hypothetical protein cypCar_00029587, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000095_03598784_03614858.mRNA True 3783 mRNA 0.41 12 3598439 3614858

Neighbor

gene id symbol gene type direction distance location
CI01000095_03566220_03574202 NA coding downstream 24018 3565990 ~ 3574421 (-)
CI01000095_03554228_03557044 NA coding downstream 41262 3554188 ~ 3557177 (-)
CI01000095_03544585_03545168 NA coding downstream 53032 3544451 ~ 3545407 (-)
CI01000095_03528759_03538412 NA coding downstream 59384 3528463 ~ 3539055 (-)
CI01000095_03511710_03521880 NA coding downstream 76494 3511137 ~ 3521945 (-)
CI01000095_03645380_03674104 NA coding upstream 30421 3645279 ~ 3674220 (-)
CI01000095_03720995_03743990 NA coding upstream 105695 3720553 ~ 3744162 (-)
CI01000095_03763628_03856780 NA coding upstream 148092 3762950 ~ 3856780 (-)
CI01000095_03937755_03971616 NA coding upstream 321159 3936017 ~ 3972420 (-)
CI01000095_04055806_04081892 NA coding upstream 440704 4055562 ~ 4081892 (-)
G310782 NA non-coding downstream 7673 3584377 ~ 3590766 (-)
G310759 NA non-coding downstream 115808 3482430 ~ 3482631 (-)
G310385 NA non-coding downstream 223590 3374432 ~ 3374849 (-)
G310384 NA non-coding downstream 226433 3371806 ~ 3372006 (-)
G310319 NA non-coding downstream 360940 3236001 ~ 3237499 (-)
G310857 NA non-coding upstream 267956 3882814 ~ 3882971 (-)
G310862 NA non-coding upstream 277500 3892358 ~ 3892703 (-)
G310918 NA non-coding upstream 380538 3995396 ~ 3995706 (-)
G310884 NA non-coding upstream 432778 4047636 ~ 4049370 (-)
G310976 NA non-coding upstream 491245 4106103 ~ 4108125 (-)
G310207 NA other downstream 375771 3192098 ~ 3222668 (-)
G309815 NA other downstream 866735 2663330 ~ 2731704 (-)
G309753 NA other downstream 2416681 1178597 ~ 1181758 (-)
G309626 NA other downstream 2510273 1085588 ~ 1088166 (-)
G311036 NA other upstream 744803 4357325 ~ 4362626 (-)
G311701 NA other upstream 1534167 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 1568735 5211587 ~ 5237234 (-)
CI01000095_05604829_05607020 NA other upstream 1991355 5603542 ~ 5607020 (-)
G312335 NA other upstream 2619527 6234385 ~ 6237845 (-)

Expression


Co-expression Network