CI01000095_03937755_03971616



Basic Information


Item Value
gene id CI01000095_03937755_03971616
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 3936017 ~ 3972420 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000095_03937755_03971616.mRNA
AAGCTCCCAACCTTGCACCATGGCAGCTGCTTGTTTAGTACTTGTTGTTGACTCTTTCCTCCTCAATCCAAGGCCTTCTAATGATGGTGCTGGACTGTTTGTCGAGTCTAAATAGTTTTGGCTCTCTAATGGTGGTCCACCATCTTCTGTGTATCCCTGATTTTAAGCCATGTACCTTTGAACCAAAGTGAAGACTCGCTCCGATACGTCTTCTGCGCTTTGTCGGCGATCATTAAGATGGCTTCCAAACAGAGCAGATTGCCTTTGGAAAACTCCATGGATGTTGGCACATGCACCCTGGGGGACTAGCATTGAATAGGACTAAACAGACATCTGCTGCACTGTGGATGCGAATGTGTGTTTATGAGCGATATCTGAGCGTGCATGATACGATGTGATCATAGGGTCTAGTCAGGCATTGAGTCATCTTCAGTCAGTGAACCGGAGCAAATGGTCAGCTGAGCTCTGGATGATGGCTACGAGCACGGCGGGCTCACTCGAGGACGGTTTGGGGTGGGGCGGGGGAATGCGGCCCCCTCGGAGCCCCCACAGTCCGCTTTTAATTGAGTTGCTCACTCAGCCAAAGGCCTTGAGGGACACCCGCCATGTCACTTCCGATGATCAACCGCAAGTTCAGTCACTGCGGAGGAACGCTGCCAGATCCTCTCAAGCCAGAATCCTCTGAATATTCAGAGACATTCTCAAAAAAAAAAAAAAAAAGCTGGTATGGGGGTGGTTTCTGTTTAGATGGTAGATAAGATGCATTGTCCAAAGAATAGATGCTGACATTAATTTTCCTGCAAAATGAACGAAAGTGAAGACTGCACAGTGATGAGCATCATGGATCAGTCTGTGACAATTGATGTTCTCCTTTTGCCTGGAGATTGCGGTAAGCGGCATGGCTTTGCTGGTGCAGTCGGAGTGTATGTAGGCGGAGGGAAACCCGGAGCCAATTCCCCCACTCACCATTACAGAGCTCAATGCTCATGCATCCTCTTTTGGGCTCAGCAAAGCAGCTGGCATGGTGCAGACATTAGGAGAGATGGAGAGAGGAAAGTGCCAGCCTGGAAAGTGATCGCTGATTGTTCAGTTGGCAGTGTCCTATGTGCCAGCCTGGTGCTTTTTGTTAGCAACCAGAGCTCTAAATTCCCAGCTCTCAGTGGGTCTTGTTTGCGTGCCGGCTTCTCCCTTCCCAGACATATGGAGCAATCGGATATCCTTGATTCATCTGTTACACTCGGAGTGACTTGTCCTGAAACGAAAAGTGGACTCGCATGCAAATTGGACCCAAAGGGTTTACTTGCCATTGACGTGCATCCAAGATGCTTCAGAATCTTTGTCATTTCCGTTTGTTCCCCTACAGCTCAAAGAAAGGACATCTCCCTGTGTGGAAACGCACGTGCGTGCATGCGAAAGTATTCGGCTTGCCTTGAAGACGAAGTCTGTTTGGGTTTGACTTCTCAATCTGACCCTCAGTTATCTGCTACTGATCCATCTGTCACGTGTTCACCTCGCTGTGCCGGATGGAGCAGATTACTGCTGCCGCCGCCGTATATTACAATAGGAAAAATGCAGTCTGGGGATGATATGGCGCTCGGATTGAAGCCAGACGCGCAGCGAGAGAGACCCGCATGGCTGGCAGCTGTTGATGAGTGCGGCTTATGGGCATTTCCAATTCATCTGTATAGCGAAGGGTTCAGATGTTTGGTTCACTACAGGCAGATGGAGATAGAAATCACCGCAGATTGGTACACAGATATTCCCCAGACTGAGCAGGTGTTCATCACACGTGGCTTCGGAGTTTTTAATATGTATTTCTACTGTGTGGAGAGACAAGCAGCTGTGGCTCTTTATGCACTGATGAAGGCAAAGTGGAGGGGATTTGGGGGCATGCTGGGGGAAAAAAAAGAAAAACATCCTAATGGACAGGAGCTGATGGAGGCCAGAGCAAGCCTGGATTACAAACTAGAGCTGTCAAAGCCGTTAAGAGCAGCAGCAGTCTCCTCCGATTACACCGTGTTTGGGATTACTGCGTACGTGCTCCAGCCCGTTCCATCTGCTCCCAGGCAGATTTTCCATGCCGTCTCTTGTAAAAGTTGCTGCGCTCGCATCCAAGCCTCAAACCAGCAGCGCGTCGTGTGTGTGCTGGAACTTGAATGTTTGTGTCTTCTGGCCACACGGGTTGAGGTCAGAGATCTGCCGGGTCTCTGTACGTCTGGATAAACCAGAGAATGTGTTCAGCTGGTCAACCACAGATATACATGTGTATGTTAGGGATGTCATGGTGAGGACTTTTTCACACCAGTAAATAAACTATTGACAACACCCATATTACTGATAACACCGGGTTGGGGGGGTGTATTGCATTTAATTTGTAGGCATCAGGGAGCTGCTAGGCCTATCAATATGTGCAGTTCTAAAAATTGCTTTTAAATGTGATATATTTTTTTTTTTGTCATCTCTAATACTCACCAAGGCTGAATTTATTTGATCAAAAATACAGTACATTTTAAAATGTAATTTATTTCAGCAACCATCAGGCTACCTCAGTCTTCAGTGTCACATGATACTTCAGAAATCATCCTAATATGCTGATTATTTATAATGGTTCTTATTATCAATGTTTTTGCTGCTTAATATTTTTGTGGAAACTGTGATGACTTATTTCAGGATCCTGTGATGAATAGAAGGTTCAAAAGAACAGCATTTGTTTGAAATTGAAATAATTTGTAACATTATAAAAGTCTTTACTTGAATCAATTTAATACATCTTTGTTGAATAAAAATATTAAAGATCTTACTTACCCCAAACATTAATAAATTGTACTGTATCAAGGTTTCCACAAAAATATTAAGCAGCACAGCTGTTTTCAACATTGATAATAATAATAAATGTTTCTTGAGCAGCAAATCAAAATATTTGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGCCATCACAGGTAAAAATTACATTTTAAATATATTCGAACAGAAGAACATTACTTTAAATTGCTATAATATTTCACAATTTAATGTTTACTGTATTTTTCATCAAATAAATGCAGCATTGGTGAGCATAAGATACTCATTCCAAAATCATAAAAAAAAAATCATATTATTCCAGACTTTTGACCACCAGTATGATGTCTAGAAAGTTCAAAAGAAGCACAGTTTATTTCTTATGCTATCATAGAAATATATTACTATTATTATATAAATTATTTATAAAATATATAATTAATGTGTAAACCCTTTAAAATTAGCCCCCAACTACTTTAATGTTTTAGAAGTATCGGTATGAATAGTTGTATTCATTTTGGCTGTGGTTATCAATTGTGGAGTTTTTTAGTTCACTTTGGCTGCTCTAGCAACAGTAGCCAAGGTCAACTGAGGGTTAATTACGCTGTATAATGGACACTAGTGTAAAGCGTGACCTCACACGGAGTTAGATTGAGATTTCCTTGTCCACTGGTCCATACCTGCCAAACACATCATGCGTCAAAAGTTCAGGACTCCTTTGGCCAAGTTTCTTTTCATCTCACCAAATTGTACTTGCCTCATTATCACCAGACAACTAGATCAATGTTTGTCCAATAATACACACCTTAGATCTGGTTAAGCTGTACTGCATGTTACTGGATCAATACCCAGCTACACTGTAAAAAAGAATTGTTGGTTTAACTTAAAAAAGTCCCCTGGTTGCCTTAAAATTTTGAGTTCATTGAAAAATTGAAAAAATTTGAGTTAATACAATGAAGGCGATTGGTTTAATCAACAGAAACTCAAAATATTATGTTATCTGAACCACATTAATCATCTAAGTTGATTTGACACAAGAAAAAATGTTGTGATAACAAATCATGAAAATGTTTTTTTTTTTTACAGTGTACAGGAGTCCGACTAAATAAGGAAATTATACATTAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000095_03937755_03971616.mRNA True 3961 mRNA 0.42 13 3936017 3972420

Neighbor


gene id symbol gene type direction distance location
CI01000095_03763628_03856780 NA coding downstream 79237 3762950 ~ 3856780 (-)
CI01000095_03720995_03743990 NA coding downstream 191855 3720553 ~ 3744162 (-)
CI01000095_03645380_03674104 NA coding downstream 261797 3645279 ~ 3674220 (-)
CI01000095_03598784_03614858 NA coding downstream 321159 3598439 ~ 3614858 (-)
CI01000095_03566220_03574202 NA coding downstream 361596 3565990 ~ 3574421 (-)
CI01000095_04055806_04081892 NA coding upstream 83142 4055562 ~ 4081892 (-)
CI01000095_04255180_04256500 MON1A coding upstream 282709 4255129 ~ 4256500 (-)
CI01000095_04262102_04292135 NGEF coding upstream 289375 4261795 ~ 4292135 (-)
CI01000095_04320760_04332337 ITM2CA coding upstream 346822 4319242 ~ 4332443 (-)
CI01000095_04332781_04341944 CAB39L, CAB39L.L, CAB39, CAB39.L coding upstream 360339 4332759 ~ 4344968 (-)
G310862 NA non-coding downstream 43314 3892358 ~ 3892703 (-)
G310857 NA non-coding downstream 53046 3882814 ~ 3882971 (-)
G310777 NA non-coding downstream 294958 3573620 ~ 3641059 (-)
G310782 NA non-coding downstream 345251 3584377 ~ 3590766 (-)
G310759 NA non-coding downstream 453386 3482430 ~ 3482631 (-)
G310918 NA non-coding upstream 22976 3995396 ~ 3995706 (-)
G310884 NA non-coding upstream 75216 4047636 ~ 4049370 (-)
G310976 NA non-coding upstream 133683 4106103 ~ 4108125 (-)
G310982 NA non-coding upstream 151136 4123556 ~ 4127020 (-)
G310999 NA non-coding upstream 206762 4179182 ~ 4179564 (-)
CI01000095_03528759_03538412 NA other downstream 398784 3528463 ~ 3539055 (-)
G310207 NA other downstream 713349 3192098 ~ 3222668 (-)
G309815 NA other downstream 1204313 2663330 ~ 2731704 (-)
G309753 NA other downstream 2754259 1178597 ~ 1181758 (-)
G309626 NA other downstream 2847851 1085588 ~ 1088166 (-)
G311036 NA other upstream 387241 4357325 ~ 4362626 (-)
G311701 NA other upstream 1176605 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 1211173 5211587 ~ 5237234 (-)
CI01000095_05604829_05607020 NA other upstream 1633793 5603542 ~ 5607020 (-)
G312335 NA other upstream 2261965 6234385 ~ 6237845 (-)

Expression



Co-expression Network