CI01000095_05878357_05879271


Basic Information

Item Value
gene id CI01000095_05878357_05879271
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 5878145 ~ 5879765 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000095_05878357_05879271.mRNA
AGTATGACCAATACCCAGACGAATGAAGGTAGGATTGTGTTTATGTACATCTGCATGAGCCTTTGCATGACTAGTAACTTACTATCCAGTCTTCCGGTACCAATTCATAGAAATACTGAAATATTGTATTATTCCATTTGCAGATGCTTTTTCAAACCCACTATGACCTGCATCTCAGTTCATGGTGAGTTAAATCAGATTTTTTATTTATTTATTTTATTTTTTTAGATGAAGAGGAACATTAGAGAAAAAGGACTTATTCAACTGCAATAAGCAACAAACAAGGTGCATTTTGAATAAAATATGAAGAATGATTTTAGAATAACATCTGCAGATGTTGATTTCATAATAATGTGACTCAAGTGATGTGCCTTTTAGACCAAAAATCATGAATCCTCCATCTGGCATCTACAGTATTTTGTTGAAGACGAGACTGCAGTGTGAGGAGCAACGCACGTTTTCCACTAGTTCTGCATTTCCAGGCTTAACTGGTGATGGAAACTTTCAAATCTCCATTCAGTTCTGCATCTGACAGCAATCTTTACAATGGCACTGCTGGTCAAAAAACTAATGCTTCCAATTCAAGCAAGAACAACACAGACGACACTGGATTCACTGTCTATATTTCAGTCATTGCTAGCATTGAAATACCCATGATCTGTCTGGCTATTTATGCTGTTTATTTTCTCATCAAATCTAAAAAAGATGCTTCAGTTTTTGTCATTAATCTGCTCATTTCAGATCTCATCCAGATTGTTTGCATATCACTCGAATACATTTTCTTTGAGTACTTCTGGAGGACCATTTTATTCATTACAATAGAGTGGACTAGTGTCGCAGGTGCATGCAGGTCCCTCTCTCACTCAATAACTCTCACTCCTCTAAAGAAGCAGTTAGTTCTGGCTCCTCTGTTCTTTGTGGTGATCAGTTACACCTTTCTAATCCTACCACTTAATATTGTATGTATTGTGTTTAAAATATTGGAAAATTTTTCTCATTTCCTAGGTAGTCTGTTGGAATTTACATATTGCTTTTATCTGTTATACCCGCTTGTGGACTGTTTGCTGTATGTGTTCATGAGGAGTGACTCTGAGAACATCATCAGGATGCATCACTGCTGCACCAGACTGAAGAGAGTTCAGAGTGAAACGGGACACATGACATCTACTGATGTACAGCATGATCATGTGTGAGAGATTCACACCAGACCACTGATGTCAGCAAATCATTTATGAATGTAAAGTTCTCAAATAACTACAGCAAGTTTAACTGAGGAAATGTGCTTGACATCAGTCGCATATAGTTGAGTACATCTTGTAGTAATTCAAAGAATGAAATGTTGCATGTCCTGTAATTGTGTTTGTGTTTCTGTCTGGCTCATCTTATGAACTAACAGAGAAATAAA

Function

NR:

description
ovarian cancer G-protein coupled receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000095_05878357_05879271.mRNA True 1405 mRNA 0.37 2 5878145 5879765

Neighbor

gene id symbol gene type direction distance location
CI01000095_05731171_05739796 KCNJ13 coding downstream 136075 5730387 ~ 5742070 (-)
CI01000095_05637467_05689858 NA coding downstream 188287 5637408 ~ 5689858 (-)
CI01000095_05604829_05607020 NA coding downstream 271125 5603542 ~ 5607020 (-)
CI01000095_05587464_05588898 NA coding downstream 288401 5587421 ~ 5589744 (-)
CI01000095_05555392_05575055 NA coding downstream 303078 5555088 ~ 5575067 (-)
CI01000095_05885040_05886552 NA coding upstream 4949 5884714 ~ 5886555 (-)
CI01000095_06364435_06391469 NA coding upstream 484253 6364018 ~ 6391469 (-)
CI01000095_06406333_06406512 NA coding upstream 525853 6405617 ~ 6407728 (-)
CI01000095_06414966_06435096 NA coding upstream 535201 6414966 ~ 6435359 (-)
CI01000095_06438476_06449339 USP16 coding upstream 557817 6437432 ~ 6449342 (-)
G312043 NA non-coding downstream 11064 5866805 ~ 5867081 (-)
G312030 NA non-coding downstream 30939 5846943 ~ 5847206 (-)
G311933 NA non-coding downstream 106682 5766790 ~ 5771463 (-)
G311928 NA non-coding downstream 148252 5715087 ~ 5729893 (-)
G311980 NA non-coding downstream 168533 5709411 ~ 5709612 (-)
G312068 NA non-coding upstream 32018 5911783 ~ 5912087 (-)
G312070 NA non-coding upstream 33816 5913581 ~ 5913780 (-)
G312267 NA non-coding upstream 97801 5977566 ~ 5977777 (-)
G312269 NA non-coding upstream 108909 5988674 ~ 5989048 (-)
G312277 NA non-coding upstream 125852 6005617 ~ 6005868 (-)
CI01000095_05211660_05234474 NA other downstream 640911 5211587 ~ 5237234 (-)
G311701 NA other downstream 723651 5149025 ~ 5154494 (-)
G311036 NA other downstream 1515519 4357325 ~ 4362626 (-)
CI01000095_03528759_03538412 NA other downstream 2340912 3528463 ~ 3539055 (-)
G312335 NA other upstream 354620 6234385 ~ 6237845 (-)
G312368 NA other upstream 399828 6279593 ~ 6280086 (-)

Expression


Co-expression Network