XLOC_010992


Basic Information

Item Value
gene id XLOC_010992
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 44154484 ~ 44159865 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021834
CTCTCctccttctacgtcattaaaccgtTGAAaagtaccacattgtcgcaagtttaatgatgtacaaaatGGAATGcgtcaataaatccgatctgcctgttttgCTGATAGTCGCATCgtcacatatccgatttatatctgatGTATTTCCACacatgaaggaggcctgaaaacGATCTCTAAATATCTAAATGCATGcctgttttgtgtttacatggtcatagaacagatccgatctgtgtcacatatgagcttTCTATAGTTCTGGATGACATGAAGGTTGATGTGGTGTTACTCCAAGATCATCGTGCCTGAGATCACACAGATGACAACTTCTAGTGCTGGAAATCTTCAGATAGGAGCAGCAGATGAGTGGAAATCTCTCAGCTTTCTAATTAATGGAGGTACACAGGCCAGAGGATGAGGCGGATCAGGGAAATGACATCAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021834 True 449 lncRNA 0.42 2 44154484 44159865

Neighbor

gene id symbol gene type direction distance location
XLOC_010991 zfpm2a coding downstream 27097 43818896 ~ 44127387 (-)
XLOC_010988 oxr1a coding downstream 412141 43417632 ~ 43742343 (-)
XLOC_010990 LO017721.1 coding downstream 474873 43679267 ~ 43679611 (-)
XLOC_010989 LO018541.1 coding downstream 598905 43555464 ~ 43555579 (-)
XLOC_010987 NA coding downstream 785613 43358925 ~ 43368871 (-)
XLOC_010993 NA coding upstream 20910 44180775 ~ 44295549 (-)
XLOC_010994 rims2a coding upstream 178940 44338805 ~ 44399335 (-)
XLOC_010995 NA coding upstream 275588 44435453 ~ 44649053 (-)
XLOC_010996 dcaf13 coding upstream 493401 44653266 ~ 44673851 (-)
XLOC_010997 si:ch211-151m7.6 coding upstream 519794 44679659 ~ 44709832 (-)
XLOC_010626 CR392024.2 misc downstream 23259309 20895112 ~ 20895175 (-)
XLOC_010981 NA non-coding downstream 1030257 43119113 ~ 43124227 (-)
XLOC_010976 NA non-coding downstream 1160592 42974547 ~ 42993892 (-)
XLOC_011004 NA non-coding upstream 853049 45012914 ~ 45014480 (-)
XLOC_011005 BX511252.1 non-coding upstream 858559 45018424 ~ 45018540 (-)
XLOC_011010 FP085399.2 non-coding upstream 944748 45104613 ~ 45106574 (-)
XLOC_011011 FP085399.3 non-coding upstream 971056 45130921 ~ 45134479 (-)

Expression


Co-expression Network