Item | Value |
---|---|
gene id | G309935 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000095 |
NCBI id | null |
chromosome length | 6456983 |
location | 1825647 ~ 1825921 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU352317 | True | 275 | lncRNA | 0.46 | 1 | 1825647 | 1825921 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000095_01821436_01824400 | MMP13B, MMP13 | coding | downstream | 1233 | 1821210 ~ 1824414 (-) |
CI01000095_01814503_01819719 | NA | coding | downstream | 5928 | 1814055 ~ 1819719 (-) |
CI01000095_01762546_01807415 | PDS5B | coding | downstream | 18173 | 1762032 ~ 1807474 (-) |
CI01000095_01753866_01754199 | NA | coding | downstream | 71448 | 1753845 ~ 1754199 (-) |
CI01000095_01747706_01752312 | NA | coding | downstream | 73335 | 1747706 ~ 1752312 (-) |
CI01000095_01922388_01929182 | MAG | coding | upstream | 95676 | 1921597 ~ 1929367 (-) |
CI01000095_01952923_01958479 | NA | coding | upstream | 126593 | 1952514 ~ 1958479 (-) |
CI01000095_01979835_01982124 | VWDE | coding | upstream | 153914 | 1979835 ~ 1982216 (-) |
CI01000095_01983843_01999514 | VWDE | coding | upstream | 157913 | 1983834 ~ 1999514 (-) |
CI01000095_02043972_02058964 | NA | coding | upstream | 217748 | 2043669 ~ 2059147 (-) |
G309928 | NA | non-coding | downstream | 86424 | 1739018 ~ 1739223 (-) |
G309809 | NA | non-coding | downstream | 209614 | 1614468 ~ 1616033 (-) |
G309805 | NA | non-coding | downstream | 533640 | 1261954 ~ 1292007 (-) |
G309622 | NA | non-coding | downstream | 690192 | 1096224 ~ 1135455 (-) |
G309719 | NA | non-coding | downstream | 695197 | 1104785 ~ 1130450 (-) |
G309947 | NA | non-coding | upstream | 28144 | 1854065 ~ 1854369 (-) |
G309948 | NA | non-coding | upstream | 28732 | 1854653 ~ 1855158 (-) |
G309934 | NA | non-coding | upstream | 35815 | 1861736 ~ 1893780 (-) |
G309781 | NA | non-coding | upstream | 53138 | 1879059 ~ 1915282 (-) |
G309958 | NA | non-coding | upstream | 70303 | 1896224 ~ 1901052 (-) |
G309753 | NA | other | downstream | 643889 | 1178597 ~ 1181758 (-) |
G309626 | NA | other | downstream | 737481 | 1085588 ~ 1088166 (-) |
G309815 | NA | other | upstream | 837409 | 2663330 ~ 2731704 (-) |
G310207 | NA | other | upstream | 1366177 | 3192098 ~ 3222668 (-) |
CI01000095_03528759_03538412 | NA | other | upstream | 1704991 | 3528463 ~ 3539055 (-) |
G311036 | NA | other | upstream | 2533740 | 4357325 ~ 4362626 (-) |
G311701 | NA | other | upstream | 3323104 | 5149025 ~ 5154494 (-) |