G309962


Basic Information

Item Value
gene id G309962
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 1969938 ~ 1971216 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU352356
CAACAGGGTTTTGGGGCCACTGTAGAATCAAAAATCTCTCTGAAAGTGTTAAAGGAAGATAACGCGTTACAATTGAATCTTTCGCAGTAGAGCAGAATTTCTAAGAGCTAGTGAGTATCTGCAGTTTTTTATTAAGTCCAAACTGTGTCTTGTTTATGCCTATGTTAATGTCGTTTAAAAGAATTCTCATATATTCACTTCACTGATCCCAGGAAATGTGAGGAAATGGATTCTGCAGATGTCTTGAGAAATTCCCTCCTCCTCAGTGAAATTCCAGCTCAGAGTTTTCAGACTACGGCTAACGTATTAACCTCTCTGAATGACATGTAGGCCTATGTATGAACTAAAAATTTATTTAATAGGTATTTTTAATCATTGGTTATTTGTAGTTTTTGTCATTGTTAAAAATGCATGTTGGCAAGCCTGATTCCAGCATAGGATAGATGTCAAACTTGCAGATTTTTTTGTAAGAGAAGGGGTTATATTATTGTAACTCTATCTGTCTGAAATCGGTGGTTCATTCATGGAAAATCAAGGCATGAAGTAGCATTACATGGTGTTTGTTTCAGAGGCCCTGGATCTGCTGGTCTGAGACATGAGAGGAAGTGAGCAGGAACTTTAATGACATCAACAGATGTGCAGAATCCTTCTTTCTTCAGAAGAAAATGTAAACACAGCACATTGAAAACACGAAAGCACACGGGTACCATTTGTGCCTAAAATATATATTTCAGCTTATGGCACCACGCCGCCCCAAATATTAGTGGTCAGCGACTTCTTCCATTTATCACGCCCAAATTTAAGTGGTTACAAAACTGAAAGATATTTTATCATTACTAACCTTAAACAATTATTTCGCCTCCAAAACATCTGATGGTGTTTTACCTCACTCGCGTCTATTCCTGTATTGAGGTACCGTATGTTGTATGCGCCATCTTGTGGAATATTGTGACGGTCACACACCACTTTTCTCTCCAAAACTAATTACTAATGGGTTTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCGTTTATTACTCACCCTCATGTCGTTCCACACCCGTAAGACCTTTATTAATCTTCGGAACGCAAATTAAGATATTTTTGTTGAAATCCGGTGGCTCAGTGAGGCCTGCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATAAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACGAGAATATTTTTGGTGCGCCAAAAAAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU352356 True 1279 lncRNA 0.37 1 1969938 1971216

Neighbor

gene id symbol gene type direction distance location
CI01000095_01952923_01958479 NA coding downstream 11459 1952514 ~ 1958479 (-)
CI01000095_01922388_01929182 MAG coding downstream 40571 1921597 ~ 1929367 (-)
CI01000095_01821436_01824400 MMP13B, MMP13 coding downstream 145524 1821210 ~ 1824414 (-)
CI01000095_01814503_01819719 NA coding downstream 150219 1814055 ~ 1819719 (-)
CI01000095_01762546_01807415 PDS5B coding downstream 162464 1762032 ~ 1807474 (-)
CI01000095_01979835_01982124 VWDE coding upstream 8619 1979835 ~ 1982216 (-)
CI01000095_01983843_01999514 VWDE coding upstream 12618 1983834 ~ 1999514 (-)
CI01000095_02043972_02058964 NA coding upstream 72453 2043669 ~ 2059147 (-)
CI01000095_02066069_02074313 ETV1 coding upstream 94394 2065610 ~ 2074313 (-)
CI01000095_02108777_02148734 DGKB coding upstream 137561 2108777 ~ 2148734 (-)
G309800 NA non-coding downstream 5384 1963378 ~ 1964554 (-)
G309801 NA non-coding downstream 8152 1960112 ~ 1961786 (-)
G309781 NA non-coding downstream 54656 1879059 ~ 1915282 (-)
G309958 NA non-coding downstream 68886 1896224 ~ 1901052 (-)
G309934 NA non-coding downstream 76158 1861736 ~ 1893780 (-)
G309981 NA non-coding upstream 40377 2011593 ~ 2014452 (-)
G310006 NA non-coding upstream 62868 2034084 ~ 2034581 (-)
G309825 NA non-coding upstream 359212 2330428 ~ 2337810 (-)
G309828 NA non-coding upstream 373169 2344385 ~ 2345941 (-)
G309791 NA non-coding upstream 521392 2492608 ~ 2493466 (-)
G309753 NA other downstream 788180 1178597 ~ 1181758 (-)
G309626 NA other downstream 881772 1085588 ~ 1088166 (-)
G309815 NA other upstream 692114 2663330 ~ 2731704 (-)
G310207 NA other upstream 1220882 3192098 ~ 3222668 (-)
CI01000095_03528759_03538412 NA other upstream 1559696 3528463 ~ 3539055 (-)
G311036 NA other upstream 2388445 4357325 ~ 4362626 (-)
G311701 NA other upstream 3177809 5149025 ~ 5154494 (-)

Expression


Co-expression Network