G309828


Basic Information

Item Value
gene id G309828
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 2344385 ~ 2345941 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU352195
AACTAACAAAATAAAACTATAACAAATGACAAAAAACCATAAAACACAAAACAATAAAGCACAAGCACCCCTACAACCCATTCAACCAAAAGCCTGTTTAAATAAAAATGTCTTCAGCTGCTTTTTAAAAGAATCTACAGAATTTTCTGCACACAATGACAGGGGCAAGGCATTCCAGAGTCTAGGTGCAACTGCTTGAAAAGACCGGTCACCCCGAGTTTTAAAACGAACTTTTGGAACCATTAAAAGGTTTTGGCCTGAAGACTGAAGAGTACGGGAGGAAGAATAAGGGGTCAACAGGTCAGTAATGTACTTGGGGGCCTGTCCATGCAGAGCTCTAAAAGTCAAAATTAAAATTTTAAAATCAATTCTGAATTTCACAGGAAGCCAATGTATTGAGGATAATACTGGTGAAATATGAGTCCTTCTGCGGGTTCCTGTTAAAAGCCTGGCTGCAGCATTTTGCACCATTTGAAGACGACCCAGCGAGGATTTATTTAAATAAGTAAAAAGAGAGTTGCAGTAATCAAGACGAGAAGAAATAAAAGCGTGCATAATCATCTCCAAGTCCGCTTTAGACAATAGCGCCCTCAATTTAGAAATGTTTCTCAAATGATAAAAACAATTTTTGACCAGCTGTCTAGAATGACTGTCCAAAGACATAGTTTGGTCAAACATAACACCAAGATTTCTGAGGCTCGTCTGAGCAGAAGAACCCAAGGAGCCAAGGTGCTGTTTAATTTGAGGTAACTTATGGTCTGGAGCGAAGATTAAAGTTTCAGTCTTTTTAATATTCAATTGTAAATAATTATTAAATAACCAGTTCTTTTATACAGGACAGGCAGTCCAGTAAATCAGTTAACTTGTCAAACTCAGAATCTCTAAAAGAACAGTACAGCTGGATGTCATCAGCATAAAAGTGATAAGATACATTTTTAAAACCATGAATTATTTCACCAAGAGGGCAAATATATAATAAAAACAAAATGGGACCTAGAACTGAGCCCTGGGGTACTCCATATGGCAAGGGGGTCATCTCAGACAGAATATTATTAATTGACACACAAAATGTTCTGTCGCTCAGGTAGGAGGAAAACCAGTCAAGAACTACTCCAGAAAGACCTGTTTCAATACGTAAACGATTTATCAAAATATTGTGGTCAAGTGTATCAAATGCAGAAGATAGATCCAATAGGATCAAGACCGAGTACTGGCCAGCATCGGCCGCCATCATAATGTCATTTGATACTTTCAGCAGGGCAGTCTCAGTTGAATGACATTTCCGAAAACCTGACTGAAATTTATTTATCAAATTATTTTCCTCAAGGTATGCAGTCAGCTGCCCCGCTACCACTCTCTCCAAGATTTTCGATAAAAAAGGCAATTTGGAGATGGGCCTATAGTTGTTTGGATCAGATGAATCCAAATTGGGTTTCTTCAAAAAGGGGCAGACAACCGCTTGTTTAAAAAAGCTAGGCACAGAACCAGTAGAAAGAGAAAGATTGATCAAATTAACAACATAAGGTCCAATTAAATCAAATACATTTAAAAGCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU352195 True 1557 lncRNA 0.38 1 2344385 2345941

Neighbor

gene id symbol gene type direction distance location
CI01000095_02324652_02326773 NA coding downstream 15918 2323493 ~ 2328467 (-)
CI01000095_02302091_02312610 ANKMY2, ANKMY2A coding downstream 31775 2301141 ~ 2312610 (-)
CI01000095_02295150_02298027 SOSTDC1A coding downstream 46310 2294733 ~ 2298075 (-)
CI01000095_02282657_02292145 ISPD coding downstream 52240 2282156 ~ 2292145 (-)
CI01000095_02215864_02225877 NA coding downstream 118508 2215349 ~ 2225877 (-)
CI01000095_02348321_02380767 BAG6 coding upstream 1732 2347673 ~ 2381968 (-)
CI01000095_02418530_02482423 GABBR1B, GABBR1, GABBR1A coding upstream 72419 2418360 ~ 2482423 (-)
CI01000095_02495285_02504431 NA coding upstream 149113 2495054 ~ 2504431 (-)
CI01000095_02506035_02512392 MGAT1A coding upstream 159702 2505643 ~ 2512392 (-)
CI01000095_02521753_02522664 NA coding upstream 175103 2521044 ~ 2523022 (-)
G309825 NA non-coding downstream 6575 2330428 ~ 2337810 (-)
G310006 NA non-coding downstream 309804 2034084 ~ 2034581 (-)
G309981 NA non-coding downstream 329933 2011593 ~ 2014452 (-)
G309962 NA non-coding downstream 373169 1969938 ~ 1971216 (-)
G309800 NA non-coding downstream 379831 1963378 ~ 1964554 (-)
G309791 NA non-coding upstream 146667 2492608 ~ 2493466 (-)
G309814 NA non-coding upstream 171378 2517319 ~ 2517542 (-)
G310145 NA non-coding upstream 250898 2596839 ~ 2597192 (-)
G310150 NA non-coding upstream 256369 2602310 ~ 2602509 (-)
G310198 NA non-coding upstream 466345 2812286 ~ 2813354 (-)
G309753 NA other downstream 1162627 1178597 ~ 1181758 (-)
G309626 NA other downstream 1256219 1085588 ~ 1088166 (-)
G309815 NA other upstream 317389 2663330 ~ 2731704 (-)
G310207 NA other upstream 846157 3192098 ~ 3222668 (-)
CI01000095_03528759_03538412 NA other upstream 1184971 3528463 ~ 3539055 (-)
G311036 NA other upstream 2013720 4357325 ~ 4362626 (-)
G311701 NA other upstream 2803084 5149025 ~ 5154494 (-)

Expression


Co-expression Network