G310207


Basic Information

Item Value
gene id G310207
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 3192098 ~ 3222668 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU352668
AGAAGCACATCTTGGCTGGAGGCGTTCGGACAGGGCTGAGGGGACCTCTCCTCCCCCCCGAGATTGAAGCTCTGGGTCCTCTCACAGAGATATGCAGCACATACAGGAGATGCATAATAATCTGGATCAGGATGCAAACATTGACTGTTCAGATTCACAAACCTTCAATGGAACATTTCATTTGGACTCAGAAACCACTGGAAACAACAGAAGTCTTCAGGAAAAACTCCAACAGAAGAGACGCATAATAATCTGGATCAGGATGCAAACATTGACTGTTCAGATTCACAAACCTTCAATGGAACATTTAATTTGGAAACCACTGGAAACAACAGAAGTCTTCAGGAAAAACTCCAACAGAAGGAATGCAAAGGTTACCTTTGAGCTGAAGTTTCAACTGCCCCAGAACGGTAGTCAATGCCAAGAACAAAACACCATGAATGTATATTTTGTTTTATATGCGTATATCAGGAATCAAAACAGCAGTGACCCTCTAAAGATGAAACTCCCCTCCCTATTAATTTTCTAAATGATACTGTTGGGTTCATTTTCCTCTGGGCTAGAGCAGGGGTTCTCAACTCTGGCCCTCAAGGTCCACTTTCCTGCAGAGTTTAGCCAGAGATTGTATATTATAGGGAGATAAAAGGGTCTGTATCTCTTACCGTGTAATGGTAGTGACATCAGTCGCAACTTTCCCTAGTCTGCCTTCTCTTTAAAAAATAAATTTTTATCAAGCTAAAATATACATATAGTTCCCAACAAAAGTATTGTTTAGTGCAAAACATGCTGAAGATTAGCAAACAGGCTGTCGATTAATTAAATGATTAGCTATTTCTCCACAAAAGCTGTTTAATCAGCATAGTGAAGCCTCTCATCTGTTGACATCCATTCAAAAAACAGCCTCTGGTCTCCTTTCCTGAGTACCGCCAAAGGTGGAGCGTTAGCATTAGCCGTTATGCTTTTTTGGCTAAAGGTTGCATGCTTGCCTTCCAGTGGCTTTGGTTTAGCTCCAACCCTAATCAAACACCTGAACAAGCAATTTAGGGTGCGTTCACACTTGTAGTTCGGTTCGTTTGGTTCGTTTGGTCGGGACCAAAGAAGAAAAAAAAACATTTAGTCCTGGTCCGATTAGCGTTCAGATTGGCAATTTTATTACCGAACAAAAAGATACCGAACCTAAAGGCATAGGGATACGTTCACAACCTGATTGGTCGGATTTTATGACGTATTGCCAACTTACCGAACATCCAAAACAACACTGTGTGCTGAGGTAAATGTGCGTGTTTTGTGTGTGTGTAGCCTGCATATGATGGTATTTTGGCCAGCTGGGAACCCGTGAAGAGCTAATAAAATGTGTAAAGGAGTCAAAACAGCGGCGGGAATCCATCCGTCACACAAACGATCTGCTGCGTGGGTGACGCGCGTCTGATGCCTGTCATGGGCAAACTCGCGACTATGATGAAAAAAAAACGATATGCGTGAGGATTCTGTCCTTTTTAGGGTCTCGTCTTCCTGTTTTTGGTTCGTTTACATGTCTTTGGTCCGTGTTGCGTTCATATATCATTTGAACCGCACCAGAGTTTGTTTGGAAGCGGACCGAGACCCATCTTCTCAGCGGTCTCGGTCCGCTTGTTTGGTGCGCACCAGGGTTCGGATGGCAGCGTTCACATATGTTCAAATGAACCGCACTAACAGAGCAATCGCACCAGGGTTCGTTTTAAGCGAACCAAACATAGCAAGTGTGAACGCACCCTTAATGTCTTCAGGATTACTATGCTGCGTCCCAATTCATCTACTTATACTATGACCTAAAAATATGTACGTTTTGGTGAAGAAAAAATACATACTTTTGAGTGTTGCAGAAGAGTATAGGCAAGCTAATGTATATAAATCAGGGATTGGCAACTCAGGCCATCGAAGTCCACTGTCCTGTAGCTATACTCTCAGGTCTAAATATCAGATGTCTGACAGGCAGCTTAGCATAATGAATATAAAATGTTTACATATGTCCCTTTTATAAAAACAATTTGCTGCTATTCTATGCTGCTGTCCAGTGTTTTCACACGATAACATGGTTACATTTCATCATGTTAACAAATGATTACTTTCACTTAATATTTTATTAACATTTACAATTTACAAAACATGTTTTTATACTGTATGTCTCTTTTTTATAAACAATTTGCTGCTATTTTATGCTGCTATTTTATGCTGCTGTTTATTGTTTTCACATGATATGTTACTGAGTAATATAAGGTAATCAATGGGTTAAGGTTAGGTTTAGGGGTAGGTTCATGGTTAGTACGTAGTTATTAAGCAGTTATTGCAATTACTGTAATAAGTACGTAGTACATGGTGAACAGGACTGTAAATTGAAGTGCTACTGAATGTTTTTGTGTAATAGCTTAGTTTCTGGTATTTACAGTATAGTGTAAGGAAATGCTCTTATTTTTTTCATGATGATATTGTATTGAAAATTTAAGGCAGCTGTTTCTGTATGTGTCATGACAACAGTGTTTGGATTGTTTGATTGCATATAGAGCTACTTGAATATGATCTAATTGTACCATGTTTTTTTTTTTTTTTTGAGTTCTCCCTGTCTCTTTCATGCTGCTCCCCTCCTGGAGAGAGATAATAAATCAAGTTGAATTTCAGTAAGTTAACACACATGAAATATTTGTGGTTGGAAATACAAATTTTAAATAAAAAAAATAAAAAAATAAAAAGATGCCTTGGGTGGAGTGTGACCAATAAACATGTTTAGAACAATGTGTGTTTTTAAAAATAAAAGCAATAAAAGGCATTAAAATAGAATGGTTATATGTACTTTCTAAAGCATCTTAAGTCAGCAGTCTAAGAGTTCTTACAGAATATTAGTAATACCCAAGAAAATGTTATGTATGTATTTATGTTTGTAATTTTTTCCATATTAATCTTTGTAATATCATATTAAGATATCGTCATTTTCTCAGCTATCAGAGGAAGTAATAAGTCATCAAAGGCACAAACTGAATTGAAACTGGGAAAGTAACTTTAATTTTTCATTATTGTGATATAGAATTCTGTACTGCACATTATATACTGTATGATACACGTTATATAAACAGAACAATTTTAAGTTAGTCTGCTGTTTCTAGTATGTAGACTGTTAGACCTTTTGTCACCTGGTTACTTAATTGTAAAAGCCATGAATGGATTTCGGATTTCAAGTAGCTATTCTAACTATGGCATTTACACCTGAATATTTGCAACTGCATATCCACAACACCTCCATGAAA
>TU352669
AGAAGCACATCTTGGCTGGAGGCGTTCGGACAGGGCTGAGGGGACCTCTCCTCCCCCCCGAGATTGAAGCTCTGGGTCCTCTCACAGAGATATGCAGCACATACAGGTCTTTCTGATGGCTGAGACTCTTGACAGAGACAATGAGTCAGTGGCGTGCACGGACTCCCCTGCCCCTGTCACGTATTGTTTTGGGTTTTGTTTTCATGTTCATGATTTCATGTCTTTTATTTTGTAGTTTGTTTTATGTTGCTTGCTTGTGCCATGCTTCCCTTGCTCCTCATGTTCTCCCTTAGTCTATGTGTCATGTTCTGATTGGTTGTTTATGGTCATGTGGTTTTCAGTTCTGTTTGGTCATTGGTTCCCTTGTTCCTTGTGTCACTTCCCCATTGGTTGCCATAGTCATGTGTTCACTAAGTTTATGTATTTAAGCCATTGTCTTCCCCATGTTATTGGGTTGTGTATTGTTAATGTAACCCTGCTGTTGGTGAGTGTGATAGTCAAGTCTGTTCTTTGCCATGCCATGCCATGCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU352668 False 3278 TUCP 0.38 6 3192098 3222668
TU352669 True 532 lncRNA 0.46 3 3219211 3222668

Neighbor

gene id symbol gene type direction distance location
CI01000095_03169563_03175213 IRS1 coding downstream 42613 3169539 ~ 3176598 (-)
CI01000095_03149700_03152493 NA coding downstream 66365 3147397 ~ 3152846 (-)
CI01000095_03034508_03067922 NA coding downstream 150025 3034270 ~ 3069186 (-)
CI01000095_02947521_02950293 NA coding downstream 267549 2947013 ~ 2951662 (-)
CI01000095_02829083_02852606 MECOM coding downstream 366605 2827729 ~ 2852606 (-)
CI01000095_03249415_03287084 NA coding upstream 26747 3249415 ~ 3287084 (-)
CI01000095_03431721_03434234 NA coding upstream 209032 3431700 ~ 3435196 (-)
CI01000095_03485842_03499188 NA coding upstream 263136 3485804 ~ 3501925 (-)
CI01000095_03508757_03510876 NA coding upstream 285995 3508663 ~ 3510966 (-)
CI01000095_03511710_03521880 NA coding upstream 288469 3511137 ~ 3521945 (-)
G310215 NA non-coding downstream 39425 3179088 ~ 3179786 (-)
G310293 NA non-coding downstream 89686 3129195 ~ 3129525 (-)
G310250 NA non-coding downstream 141206 3052698 ~ 3078005 (-)
G310321 NA non-coding upstream 6965 3229633 ~ 3229895 (-)
G310322 NA non-coding upstream 9439 3232107 ~ 3232332 (-)
G310319 NA non-coding upstream 13333 3236001 ~ 3237499 (-)
G310384 NA non-coding upstream 149138 3371806 ~ 3372006 (-)
G310385 NA non-coding upstream 151764 3374432 ~ 3374849 (-)
G309815 NA other downstream 487507 2663330 ~ 2731704 (-)
G309753 NA other downstream 2037453 1178597 ~ 1181758 (-)
G309626 NA other downstream 2131045 1085588 ~ 1088166 (-)
CI01000095_03528759_03538412 NA other upstream 308244 3528463 ~ 3539055 (-)
G311036 NA other upstream 1136993 4357325 ~ 4362626 (-)
G311701 NA other upstream 1926357 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 1960925 5211587 ~ 5237234 (-)
CI01000095_05604829_05607020 NA other upstream 2383545 5603542 ~ 5607020 (-)

Expression


Co-expression Network