G310319


Basic Information

Item Value
gene id G310319
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 3236001 ~ 3237499 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU352789
CTGTAGACTGTACGAGGAGTCTTCCGTCATCTTTGTCAGTCCTGTCTCCAGGAGCAGGTAGACCAATCCGGTGAGCAGAGAGAAGACAGACAACAGGTACGCAAACCAGGCGCCTCCCAGCTTCTTCTCAAGCTTGATGCCCTTCCAAAGGAGCGAGGCCATGTTGAAGTACAGGTGCATGTCGTCAACATGGTGAAACGGTGACAGCAACAGACGACCCCAGTCTCTGTACCAGTACGCCTCCCGAACACTCAAACACGTCTGCAGAACGGGGTTTGACAGGAAAGAGGAACAAATAGACGTTGAGGCCTAGTGTTGCAAGAGTGACAGGTGGGATGTTGTCTATTCCCAGCTGGAAAACCTGAGAGGCCAGCAGGAGCAGGCCGAGATTGAATCCCCTTTGTCTGTTGCGATTCATAATATCTGAATGACAGCTTCTGGTTTGAAGTTCATACGTTTGGATGTTGTGTCGTGACTCTGCTGAGTAAAGAGCGACTCCCAAATCCTAATATCAGCGATAAACAATAGAACACGTCAGATTTTACTTTCATTTCACTACGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU352789 True 564 lncRNA 0.49 3 3236001 3237499

Neighbor

gene id symbol gene type direction distance location
CI01000095_03169563_03175213 IRS1 coding downstream 59403 3169539 ~ 3176598 (-)
CI01000095_03149700_03152493 NA coding downstream 83155 3147397 ~ 3152846 (-)
CI01000095_03034508_03067922 NA coding downstream 166815 3034270 ~ 3069186 (-)
CI01000095_02947521_02950293 NA coding downstream 284339 2947013 ~ 2951662 (-)
CI01000095_02829083_02852606 MECOM coding downstream 383395 2827729 ~ 2852606 (-)
CI01000095_03249415_03287084 NA coding upstream 11916 3249415 ~ 3287084 (-)
CI01000095_03431721_03434234 NA coding upstream 194201 3431700 ~ 3435196 (-)
CI01000095_03485842_03499188 NA coding upstream 248305 3485804 ~ 3501925 (-)
CI01000095_03508757_03510876 NA coding upstream 271164 3508663 ~ 3510966 (-)
CI01000095_03511710_03521880 NA coding upstream 273638 3511137 ~ 3521945 (-)
G310322 NA non-coding downstream 3669 3232107 ~ 3232332 (-)
G310321 NA non-coding downstream 6106 3229633 ~ 3229895 (-)
G310207 NA non-coding downstream 13333 3192098 ~ 3222668 (-)
G310215 NA non-coding downstream 56215 3179088 ~ 3179786 (-)
G310384 NA non-coding upstream 134307 3371806 ~ 3372006 (-)
G310385 NA non-coding upstream 136933 3374432 ~ 3374849 (-)
G310759 NA non-coding upstream 244931 3482430 ~ 3482631 (-)
G310777 NA non-coding upstream 336121 3573620 ~ 3641059 (-)
G310782 NA non-coding upstream 346878 3584377 ~ 3590766 (-)
G309815 NA other downstream 504297 2663330 ~ 2731704 (-)
G309753 NA other downstream 2054243 1178597 ~ 1181758 (-)
G309626 NA other downstream 2147835 1085588 ~ 1088166 (-)
CI01000095_03528759_03538412 NA other upstream 293413 3528463 ~ 3539055 (-)
G311036 NA other upstream 1122162 4357325 ~ 4362626 (-)
G311701 NA other upstream 1911526 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 1946094 5211587 ~ 5237234 (-)
CI01000095_05604829_05607020 NA other upstream 2368714 5603542 ~ 5607020 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008686 rhbdd1 coding NC_007126.7 CM002899.2 35933094 ~ 35944902 (+)