XLOC_011010 (FP085399.2)


Basic Information

Item Value
gene id XLOC_011010
gene name FP085399.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45104613 ~ 45106574 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021509
ACCACAATCAGAACAATGGATCGCAGGGAGCAAGCGTCTGATACAATTGTGCTGTTGCAGCCTCAGCCTCCACCTGTATATTATCCACCCAATCTAGGCCCTTCAGTCCAGCAGGGCCCCTACAATCAAGGGCTACTTCCAGGACAAGCTGTCGTCTCAGTGCAGACTGCAGGCTTTGTTCCTGCCGCACCAGTGCCGGATCACTTGTGTTACTCCATCTTCACCATTCTTTGCTGTCACTTGAGCTTTCTGGGCATCGCAGCGCTGGTATTTTCCCTCTCTACTCGAAATGCCAATGATGCTGGACACAGAGCATTAGCAGAGAGGAACTCCAAAACGGCACTCACCCTGAATAATATCGCCTGTGGTCTTGGCATTGCTTTTTATGCATTGCTTTTCGGTCTGTTGTTGTTAATTTGAAGCCAACAAATGTATATTCATAACTGAGCTGCTGTCTTAGCTGATTGCTGGTTACAGGCAAACCTGGTTCtcttcattttaaatgttaatatgtcAAGATTCACTCAGATAAAACACATGTTTTAAGGTGAACTGTTTCacatttacaacaaataaaagcTTAAACTGACCAAGTGCAGTTATGTACATAACCCTTCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103738

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021509 True 619 processed_transcript 0.45 2 45104613 45106574

Neighbor

gene id symbol gene type direction distance location
XLOC_011009 si:rp71-77l1.1 coding downstream 5907 45087810 ~ 45098706 (-)
XLOC_011008 si:rp71-77l1.2 coding downstream 23801 45077593 ~ 45080812 (-)
XLOC_011007 gapdhs coding downstream 34731 45044642 ~ 45069882 (-)
XLOC_011006 tmem147 coding downstream 62377 45019449 ~ 45042236 (-)
XLOC_011005 BX511252.1 coding downstream 86073 45018424 ~ 45018540 (-)
XLOC_011011 FP085399.3 coding upstream 24347 45130921 ~ 45134479 (-)
XLOC_011012 FP085399.5 coding upstream 34284 45140858 ~ 45144372 (-)
XLOC_011013 si:ch73-343g19.4 coding upstream 42781 45149355 ~ 45152169 (-)
XLOC_011014 si:dkey-33i11.9 coding upstream 66219 45172793 ~ 45178430 (-)
XLOC_011015 FP085399.6 coding upstream 67872 45174446 ~ 45174560 (-)
XLOC_010626 CR392024.2 misc downstream 24209438 20895112 ~ 20895175 (-)
XLOC_011004 NA non-coding downstream 90133 45012914 ~ 45014480 (-)
XLOC_010993 NA non-coding downstream 809064 44180775 ~ 44295549 (-)
XLOC_010992 NA non-coding downstream 944748 44154484 ~ 44159865 (-)
XLOC_010989 LO018541.1 non-coding downstream 1549034 43555464 ~ 43555579 (-)
XLOC_011016 FP085399.4 non-coding upstream 80099 45186673 ~ 45193152 (-)
XLOC_011019 FP016247.2 non-coding upstream 135807 45242381 ~ 45245742 (-)
XLOC_010988 oxr1a non-coding downstream 1362270 43417632 ~ 43742343 (-)

Expression


Co-expression Network