G310967



Basic Information


Item Value
gene id G310967
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 4312941 ~ 4316939 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU353506
AAAATGGGTTTATTAGGATTATAAAAGATTGTTAAGTTTGTGGCAGCTATAAGACAACAAAAACACACTATTTTGCATTAGTCCATCTAAGGTTAAAATTGTTTACAATATTCACTACTGCTGTTTAATTCACAGGCATATTGAAAGCTATACGGTATTAGTCTAGCTTTTTAGCACAAGGTGAGAAGAAACATGACTCAACCTGAAAATATGACACTTGCAAGGCAACTGACAGATTTTTATATAACTATAAACATGTAAACATATAGGTCTGTCAGCTAAATTTTAATTTAATGTGACAACAATTAGCTCACATGATCAAAGACACTTTAATTGAGAAATCCCTGTGGTAAAGACGTCAATTTTAAGACTTTTTAGATGATAGAACAAACAAGAAATCCTAAAACTGTTCACATAATTATTCTAGACATAAACAAATCTAAGAAGTTCTTTAAAATCACATATATTAAATATACAACATAAGCAGATGTGTATCATATTTAAGATCAGACATTATGGCAGGTTTTATGACAGACACATTTATAAACCATTAAAACCGTAAGAAACTATATTCCTATTATCATATTTAAGTTTGAAGTTTAAGTCTGATCATCTGCATCCCCAGGTGACTTCATGGTACCTTCCAAATTTAGATGGAACCCAGACAAAATTGACATTTTTGTGGTTGTGACGGATGAGTTTTGCCAACAGATGCACACAGAAGATCCTCTAAAGTAGGGGTATCAAACTCATTTTAGGTTGAGGGCCGGATGGTAAAAAATGTAACCATGTGTGGGCCGATTTTTTTTTTTTTTTTTTTTTTTAAACCGTAGTAAGCTGACGGTTGCATTAATATTAACCATACAATCTACACATTAATTTGCAAGAAAAAAAAACACACACTACTCTTTGAAAACAGCATTTGTTTTTACTGCGAAAAGACTTTATTAGACTTTTAAAATAATGTTTGATTGATAAAACTTTACAATAAGGTTCATTAGTTAACAACATCAGTTAACATGAACTAATAATGAACTGCACTTATACAGCATTTATTAATCTTTGATGTTAATTTCAGCATTTACTAATACATTATTAATATCTTGTTAACATTAGTTAATGCACTGTGAACTAACATGAACAAACAATGAATAACTGTATTTTCATTAATGTTAACGAAGATTAGTAAATACAGTAACAAATGTATTGTTTATGGTTAGTTCATGTTAGTTAATATACATTAACTAATGTTTAACTAATGAACCTTATTGTAAAGTGTTACCATTTGATTCAATGTTTTTATTAATGATGCACCAATTTTTTTTTTATTTATTTATTTTTTTTTTTTTATGGCCAATCCCCGTTTTTTTGGAGCAAATTTGATACTGGTTGCCTTTTCTTTTCTTTTCTTTTCTTTAAGCAAATTTATTTGTTATTTGTTCTATAACAGGCCAAACTGGCTCTAAACAAAAAATATGTGTAGCCATTTAGTATACAGGCACCACTGCATTTTGAGCATGAGCAGTTGTTTTTTATTTAAATTAGATTGTATAATTTCAAGATTTACAGGAAAAAAAACAGCATGGTCTGACTTTATAGCTTAGTGAAATTATTCTACATAAGACGCTTGCACAAAACAAAAATAGCAGACGGACTGAATGAAAATGCAACAGCAGCGATATGGCGTTTCCTTGGTTACCGCTATACACAAAGCATCGCTGCGATTATAAAATAGGCTACTTATACGGAGATCGAAACTTTTCTGCAGACAGTTCCCTTTTAAGCTACATTCATATAAAAACCCAATTCAAGATTTATATTTTTCTTCTTATTTATATTTTTCTTCTGGCCGTGTTAACGTCCTGTTTACAGACTTCGTAATATTTTCAAATGACAGTTTGGGAAATGATTGCAAAGCAGTTTGTTTGCAAGTCCAGAATAGATATTGGCCAAAATTAACTAATAACCGTTCGGATTTATAGCCGGTGGACCATGCATAACTGTTTGTTTGTTTGTTTGTTTTAATTATTGTTCAAATCATCCCCCGGGCCGGATTGGACACCTTTTTGGGCCGTATGTTTGACACCCCTACTCTAAAGTGTTTACTGGCCCAAATATTTTGCTTTTAAGAACGCTGAGGTTGCATTGAATCAGAATTGCCACATCTTGTTAGGCTACAACAGGAAGTGGAAAAAAGCATAGCTTCAATGTGGTTCACAAGTCATCATTATAAAAATAAATATAAATACAATTAAAAACATGTTTTATACATGAGCCACAAAAAATATAACTTTTCTCTGTTGAAGATATTCTGAAAGCCACATATATGTTATACTGCTAAGTATGAGGCTCCACACCAGAAAATACTAAAATTACAGTACATTTCAATAAGCCAGTTAAAATATAATGCAATTAAAGACTATTATGCAATATAGTATAATCACAGTATATTCTAACCAAACAGATCCAATAGCGTATGGTATATTTAAAGCACTTATTTGGACGTATTTGAACATTTAGGTGAGATTTAAACGAAATATCCAACCAACGTTTTTAACCCTCTCAGGATGGTTTGATGTATGAAATGCATTGTGAAGTTCACACATGTGTTCTGAAAGATTAACACAGTAGTTATTAATCACAACACTAATGTCTGACACCCACAAAGTGTTATATACCCTACGTTTTTAACACCCATGTTTATACTTTCTATCTTACCCAAGTTCTGAGGCCACAGGTTTTTTTTCTCTCTCAGGCCAAACTTTTGCGATGGAAATAAAATTATGTGGGAGAAAAGCTCTTAAGAGCGAACGCAAATTTTCCGGGAGAAAGCAATACATTTGCAAGGTTTTCGAGGGAACGATAAAGCACTGAAATATATTTTTTCCTCTAACTATTTTTCCCCATCGCCATGTCCCATTCGGGGCTCCGTACTAGTCTCTCTACTGTGTATCCTAACTATTTTCAGCTAGTTTAAGACCCTTTCATTCGACCTGCTGAGAGAATACGTGCCAACATCCATTTGTCTTTTACTGTTGTCCTGCCAGAACGAGTCCAGGGAGAAATAGTAGATGAGAGGGTCCAGACAGCAGTTGACACTCGCCAGGCAGATGAGCGCTCGTAAAATTTCGCTGTCGTTTTCCCCCTTGAACGTCAAGAGTTGTAATGTAAACGGGAGGAAAAATATAATAAACACCAACATGTTGACTGCAAAAATCAGTATCACGTTCATTTTGTTGTTCACTTTGGCCGCGCCAGCGCTGGGACGCTTCTTCAGCACGACTATGACCACGACCGTGGAGACGATATTGATCACCAGCAGTATTAATATAAATGTCGCCTGTGCGACTGCCATGATTGTCGAGCCCTTGGCGTCCCCTTGATACTCAAAACACGGTAGGTTGGTAACGTTACAGATATTGTTCAGGGTGCTGTGGAGTTTTATAATCTCCCGAATGCAAATGATGGTGACGAGGATCCACACAGCCGCGCAGCACTTGCAGGCGCACGCGGAGGTTCGCAGACACCGGGAGCGCAGAGGGAAGACCAGGGCGACAAACCGGTCCACACTGATTAAAGTGATGAAGATACAGCTTGTCCTGATGTTAACTCGAAACAGCATGATGGCAGTGGTGCATGTGGCCACTCCAAACGGCCATTGGTGCGTCGCGTAAAAGTAGACGCGCAGCGGCAGGGAGAGCGCGAGGAGTAGGTCAGATGCGGCGAGGTTCACCATGAGCACGGCGCAGGATGACCGGAGCCCGTGACTGCGCAACAGGATCCATAGGGAAAACGTGTTGAGGGGCAGACCCACAGCCAGAACCAGTCCATACACGACAGCCGACGCCTGGAACCGGACCGAATTTGCAGGTATGCTAAAGTTAGTACAGTTTCCATGCATATTTCAGACGAGATCTGCTTTCGAAATCAGAAAGGTTGGGTCTAAGTCGTCCTCTTAGTTTTTAATTGACCTCTGGGTGGATTTTAAAGTGGTTTTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU353506 True 3999 lncRNA 0.37 1 4312941 4316939

Neighbor


gene id symbol gene type direction distance location
CI01000095_04262102_04292135 NGEF coding downstream 20806 4261795 ~ 4292135 (-)
CI01000095_04255180_04256500 MON1A coding downstream 56441 4255129 ~ 4256500 (-)
CI01000095_04055806_04081892 NA coding downstream 231049 4055562 ~ 4081892 (-)
CI01000095_03937755_03971616 NA coding downstream 340521 3936017 ~ 3972420 (-)
CI01000095_03763628_03856780 NA coding downstream 456161 3762950 ~ 3856780 (-)
CI01000095_04320760_04332337 ITM2CA coding upstream 2303 4319242 ~ 4332443 (-)
CI01000095_04332781_04341944 CAB39L, CAB39L.L, CAB39, CAB39.L coding upstream 15820 4332759 ~ 4344968 (-)
CI01000095_04829891_04901481 ROBO2 coding upstream 512952 4829891 ~ 4901481 (-)
CI01000095_04923302_04930194 NA coding upstream 606354 4923293 ~ 4930369 (-)
CI01000095_04948770_04959779 NA coding upstream 631665 4948604 ~ 4960185 (-)
G311023 NA non-coding downstream 54348 4258317 ~ 4258593 (-)
G311021 NA non-coding downstream 58332 4254408 ~ 4254609 (-)
G310969 NA non-coding downstream 67846 4241930 ~ 4245095 (-)
G310968 NA non-coding downstream 90759 4221773 ~ 4222182 (-)
G311011 NA non-coding downstream 92915 4219454 ~ 4220026 (-)
G311033 NA non-coding upstream 32725 4349664 ~ 4349921 (-)
G311036 NA non-coding upstream 40386 4357325 ~ 4362626 (-)
G311046 NA non-coding upstream 79355 4396294 ~ 4396548 (-)
G311053 NA non-coding upstream 100957 4417896 ~ 4418121 (-)
CI01000095_03528759_03538412 NA other downstream 775708 3528463 ~ 3539055 (-)
G310207 NA other downstream 1090273 3192098 ~ 3222668 (-)
G309815 NA other downstream 1581237 2663330 ~ 2731704 (-)
G309753 NA other downstream 3131183 1178597 ~ 1181758 (-)
G309626 NA other downstream 3224775 1085588 ~ 1088166 (-)
G311701 NA other upstream 832086 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 866654 5211587 ~ 5237234 (-)
CI01000095_05604829_05607020 NA other upstream 1289274 5603542 ~ 5607020 (-)
G312335 NA other upstream 1917446 6234385 ~ 6237845 (-)

Expression



Co-expression Network