G311834


Basic Information

Item Value
gene id G311834
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 4833888 ~ 4835258 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU354487
CAGGAGGCGCTGAGGCGTAGTGCAGGTATTCTGCAGGAGCCGTCCCTTCTGATGTGGAGCTCTGTACCTGCCTCTGTCTCTGCCAGCACATTCAATTCATTATATGCAGTCTTGCTTTGCTGAGAGACAGTCTCGAGGGACTCAACTTTTTTTTAGCGAAACAAAGCAGTATGCAGTTTCTGAGGAAACTAAAAGGAAGAGACTGTCAGGGAGAGTTTTCTTTTTTTCAGGTTTTTTTTTTTTTTTTTTTAGTCTGCATCCTATTATTTTCTCTTTTAGACAAGAGAAACACGAAATGTATTTTGGTGCTTTGAAAATCTTTATATTTGCAGGTATTACAGGAATTTGCAGGTATTAATATGATTATTTTTAGGGTTTTATATTCCAGCAGGAAGCAGTATTTACTTTACAATATTAACACAGTGTTGTATATTTACCATTTTTATTCGCAGGTATTATAATATGGGGGTTGTATGCTAGCAACAATCAGTATTTACTTCACAGTATAAAGATAGTGTTACAGATAATAATAAATAACTGATAATAATAAATAACTAATAAGTTATTATTAGTAGTAGTATTTTCTAATAAACTATTTTTATAGTAGTAATAAATACATTTTAAAGCCGCAAGCAAAAAAAAAAAAATCTTAAAGAAAAAATGTTTTGAAAGCACTACAGTGTTTTTAGTGTCACCAAGACCTACAAATCTGTCACCAAGACCTAATTAGCTCAATGTTAAATCTTGAAACATACTTGAAACTATAAAAATATTTCCCAGGCAACATTGTAACCCTCTTAACTTTACTCTCGGATCATTAAGCAATAGTCGCGCCATCTCACATCAGCTTCCCCGAGGATATTTGTGCCAGGTTGCCATCAATCAAAAAAAAATCCATGCCATAAATCTGACAAGTGCCAAAGAAGAAGAACAGCACAGAGCCGTGTGGTTGCTTTGATCATGCTGCGTGTTTCTGTGTGAGATATCAGCTGCTTCACCTCAGGCCACGTGCAGGTGCGTGCATTCCTTCCCATCAAAGCAATCAAAAGGAAGTGAGGTCGTGATGTTGTAGTCAGGTGGCTGGTGTGAGTTTATATGCTGGATGAAAGCAGGATAAGTTACTTAAAAAAAAAAAAAAAAATCCTAAAAATGCCAGAACAGATTAATGAACCAGAAAGATTATTTATAAAAAAAAATAAAAAAAACTTCTTCTGTGATATTAAATTACATTAATGTTTTAGTTAACGAATTGCGCATATAATGTAACAGTGATATGTTAACCAAAGCCTTTATTCTATGCTGTTTTTCTTTTCTTTTTATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU354487 True 1323 lncRNA 0.34 2 4833888 4835258

Neighbor

gene id symbol gene type direction distance location
CI01000095_04332781_04341944 CAB39L, CAB39L.L, CAB39, CAB39.L coding downstream 488920 4332759 ~ 4344968 (-)
CI01000095_04320760_04332337 ITM2CA coding downstream 501445 4319242 ~ 4332443 (-)
CI01000095_04262102_04292135 NGEF coding downstream 541753 4261795 ~ 4292135 (-)
CI01000095_04255180_04256500 MON1A coding downstream 577388 4255129 ~ 4256500 (-)
CI01000095_04055806_04081892 NA coding downstream 751996 4055562 ~ 4081892 (-)
CI01000095_04923302_04930194 NA coding upstream 88035 4923293 ~ 4930369 (-)
CI01000095_04948770_04959779 NA coding upstream 113346 4948604 ~ 4960185 (-)
CI01000095_04982165_04986822 NA coding upstream 146664 4981922 ~ 4987360 (-)
CI01000095_05017627_05022990 ROBO1, ROBO3, ROBO2 coding upstream 182105 5017363 ~ 5022990 (-)
CI01000095_05039659_05041786 NA coding upstream 204261 5039519 ~ 5042700 (-)
G311782 NA non-coding downstream 143069 4689084 ~ 4690819 (-)
G311645 NA non-coding downstream 302180 4531445 ~ 4531708 (-)
G311063 NA non-coding downstream 385801 4447880 ~ 4448087 (-)
G311057 NA non-coding downstream 405818 4427869 ~ 4428070 (-)
G311053 NA non-coding downstream 415767 4417896 ~ 4418121 (-)
G311697 NA non-coding upstream 171744 5007002 ~ 5013224 (-)
G311844 NA non-coding upstream 286824 5122082 ~ 5127163 (-)
G311851 NA non-coding upstream 501064 5336322 ~ 5383202 (-)
G311861 NA non-coding upstream 561085 5396343 ~ 5401505 (-)
G311862 NA non-coding upstream 568703 5403961 ~ 5442273 (-)
G311036 NA other downstream 471262 4357325 ~ 4362626 (-)
CI01000095_03528759_03538412 NA other downstream 1296655 3528463 ~ 3539055 (-)
G310207 NA other downstream 1611220 3192098 ~ 3222668 (-)
G309815 NA other downstream 2102184 2663330 ~ 2731704 (-)
G309753 NA other downstream 3652130 1178597 ~ 1181758 (-)
G311701 NA other upstream 313767 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 348335 5211587 ~ 5237234 (-)
CI01000095_05604829_05607020 NA other upstream 770955 5603542 ~ 5607020 (-)
G312335 NA other upstream 1399127 6234385 ~ 6237845 (-)
G312368 NA other upstream 1444335 6279593 ~ 6280086 (-)

Expression


Co-expression Network