XLOC_011016 (FP085399.4)


Basic Information

Item Value
gene id XLOC_011016
gene name FP085399.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45186673 ~ 45193152 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021515
actaaccattCCTTCCACATTCACTGCAGGGAACTGTGCAAGTAAACGGTGGTCCCTGTGGTTCTCTGTTACCACAAAGGTCTAGTTACCGAAAAATTCTCTTGATCTTCGTTCTAAAGACTGAAGAGACGTAGAGTATACCTGCAGTGTAGAAGGAGTGTGGACGTCAGACATGGCTGAGGCTTTATCTCCAGCATATTCTGAGTGTGATAATCCTGCATTTCAACATGACTGTCATCAGCTTCAAGCAGAGTGGCATGAGCCAGTGGTCCTCGTGCAGCCCCCTGAATACATAAGGCAAGAACCACCGGCTAAACCTGTGCCAGATTACACCTGTTACTCCATTTTTACCTCACTGTGGTGTTTGTGTCTGGGGATAGCCGCCCTTCAATACTCCAAAGCTACTCGCAGAGCTAACGCTGCTGGACGGAGAGAAGAAGCAGTGAAAAACTCTCGCACAGCACTCATGTTAAATCATGTGGGTTTTGCTGTGGGCTTCGTCTTGACTGCACTCTATATACTCTACAAACTGTACCTCAAAAATGAGACATAGCTCCATAGTGTCTCTCCATCTTCATTTTAAGCAAATGTTAAgacttgtatttttttctgttttaattcatTTCAGCATTGCCTAAACCCCTTGATGtgcaaaacctttttttaatacttactagtggtaacactttagaattgTGGTAAATTAGTTTatgttgattatttattaacattaaccgAGTTGgtcagcatggtggctcagtggttagcactgtcacctcacagcaagatagtGGCTGGTTCGAGTGCtgaatgggtcagttggcatttctgtgtggagtttgcatgttccccctgtgtttgcatgggtctcctccgggtgctccggtttcccctacagtccaaaggcatgcactgggttaattgaatgaactaaattgaccgttagtgaatgaatgtgtgtgaatgcgagtgtatgggtgtttcccagtactgtttgtctggaagggcatccgatgcgtaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104303

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021515 True 1023 processed_transcript 0.44 2 45186673 45193152

Neighbor

gene id symbol gene type direction distance location
XLOC_011014 si:dkey-33i11.9 coding downstream 8243 45172793 ~ 45178430 (-)
XLOC_011015 FP085399.6 coding downstream 12113 45174446 ~ 45174560 (-)
XLOC_011013 si:ch73-343g19.4 coding downstream 34504 45149355 ~ 45152169 (-)
XLOC_011012 FP085399.5 coding downstream 42301 45140858 ~ 45144372 (-)
XLOC_011011 FP085399.3 coding downstream 52194 45130921 ~ 45134479 (-)
XLOC_011017 fxyd1 coding upstream 9450 45202602 ~ 45225520 (-)
XLOC_011018 si:dkey-33i11.4 coding upstream 34949 45228101 ~ 45235947 (-)
XLOC_011019 FP016247.2 coding upstream 49229 45242381 ~ 45245742 (-)
XLOC_011020 hpn coding upstream 55903 45249055 ~ 45288599 (-)
XLOC_011021 si:dkey-33i11.1 coding upstream 109944 45303096 ~ 45327616 (-)
XLOC_010626 CR392024.2 misc downstream 24291498 20895112 ~ 20895175 (-)
XLOC_011010 FP085399.2 non-coding downstream 80099 45104613 ~ 45106574 (-)
XLOC_011005 BX511252.1 non-coding downstream 168133 45018424 ~ 45018540 (-)
XLOC_011023 NA non-coding upstream 599233 45792385 ~ 45795127 (-)
XLOC_011027 NA non-coding upstream 789321 45982473 ~ 45994189 (-)
XLOC_011028 NA non-coding upstream 894337 46087489 ~ 46097432 (-)
XLOC_011029 NA non-coding upstream 1002973 46196125 ~ 46203345 (-)

Expression


Co-expression Network