XLOC_011023


Basic Information

Item Value
gene id XLOC_011023
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45792385 ~ 45795127 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022239
GTCATattgacagtacatcatattttacatttattttgaagataCTACTATGCAACTTAAAGGccaatttaattttctttaaaggCACATTtctttaattaggcaagtcattgaacaACAATAACTACATTTACATTGACATCAGTaaacaaattatttgccttaatctgaataagacaataatatgattaaggttttaacgtgttgcttttttaatgtttctttcatgatcccgttttacatgttatagcacataatttgattaacatcATGGCGTCACAGCGCTATTCACATTTTCTCcaaagtttcatgtaatttcggttGTTTCATTTTTGATTTGTCGATTTTAActagtttggcactttcactttcatttaggaacatttcatgtGTGCCCCCCGTtacaaactgaggtattggatgcgattaactgctggaagagtgttgttttaatggaatttgatagtGCACGCCGCATGGgggaaaaacctctgcattttgcaatttaggtgtctgtggtccttctcTGACTCGGTAGGTGTCGGAtagactatcctgttgcaaaatgtgATGAAAATCCAACACGATAATAGTCTgattgcacttcaataatgcgactaaaatcagcaactgatactccacatcttaattttatttctgtttagtttgttCATTTACTGTACAAGTGCACTACAAAAATTATCCTTATCCGCTGTCTGTGAATCGTCTTTCCAAAGATTAATATTTCTTTATACGATGACCAGTTTTTACACATAAGTGCTCAAAAAGACACGTTATACGTCTTTAATGAAATTAAAGCTGTGTTTTTTAAactaagacagcagaagtcaattattttttttcattatttagcctgatatgtccactgcaccaaaatattttaaatgtttctcaaaataaaatatattgtgttcaaaagggcaatttttttttgttttttacacagacatttaaaaataatatattttagaggagtaatcacaataccgtgaaatcgTGATACttttatcaaaggttatcatCTTGGCCGTTAGAATCTTTTTCCGTCCCATGCATAACATCAGGTACCATGTTTTTCTTGATCcatcttctgtttctttttttttttgacagtataAAAACAGCTCAGTTATGTGTTGCTACTTTGTacaatggtctcaaacttaattcctggagggtcgcagctctgcatagCTTAGCTTTATCCATCTCCAAATCACACCTGCTTTATGGTATCTAGAAGTCTTGAAGACCTTGATCAGTTGGATCAGCTGTTTAATTAAGACTAGAGGAAAAGAGCAAAAgagctgtggccttccaggaatcgagtttgagacctatattGTAGAAAAACTAAagtagtattttaaaaaattatttgcaaaACAATTAGCAAGAAGACATGCAATCATACTAAGAGCAATTAGAAAATTGGAACAAACTGTGCTTGTGACTAATTTTGTGTCATGCATTCGCTCAAAAAAACTGAACATGgatgtttttatttcaatagtCTAAAAAAACAAGTTATGCAAGTCTTTAAGAGCCGGAACTCTCCAAACCTGAAAAACACAGCTTGTTCCAGTAGTCTCTTGCTTTACTTTAAATCatgatgcttttaaatctaaattttaaGGCTAAAATGTTTCCAATTAATTGTATAACACCTGCTTTTTATTAGCaatcccattcatttcaatggctcaGTAAGTGCACGCATGCAGCTCAGGAAATACACAACATGCCTGTTCATTGTTCACAACTTTATCAGTTATGAATTCACTGTATTTTGAGGCTATAAATGCCATATCAATAATCCCTACAGAGCCACACGCTGCAGAAATGATAAATAGCACATGTTAGTATGCACTTCCCAACACAGCCAGAATTACAGCATGATACTGGTGTAAGccagtcaatcaatcaaatgTTAATTTATGATAACAGCATGTTAAGCTATAGTGGTCAGTTTACCGTTTTGTTTCATTAATGGGTGCATCATTTGTATGTATTATTCGTGCCTCTTGTACATAGTTAATGATCTGCATTATTTTGCCTAAATCATTTtctatttgtactttttttatcTTTACTCTTACCTAGTGTACTAAATATGTTTCAAAATTGAAGGTTTCCATGTCTCCTAACACTATTAGGAGTTACAGCTTGGAATCATAACACAGTGATGAaatcaaaaatacatatttcttgaacaaaaatgtataatattcaagTTGGCATCTGACAGTATCTTTTGTTTCATTGTACAAATAAATATAACGATTTGGATATGGACTTGGTTTATGATTTTGTGGATGTGGAATAGCTGTATTGAACAAGATTTTATTCGATCTTTTCATTGCCAGCTTTTGTTTGCCATATTGTTCATTTCACATTTTTGCTGCATAATGCTTATATAGTGCTGCTTATTGTGCTTGATGAATTTGCTGTCACTACAATACATTTGAG

Function

GO:

id name namespace
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function
GO:0051015 actin filament binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022239 True 2490 lncRNA 0.33 2 45792385 45795127

Neighbor

gene id symbol gene type direction distance location
XLOC_011022 rgl2 coding downstream 393977 45364153 ~ 45398408 (-)
XLOC_011021 si:dkey-33i11.1 coding downstream 464769 45303096 ~ 45327616 (-)
XLOC_011020 hpn coding downstream 503786 45249055 ~ 45288599 (-)
XLOC_011019 FP016247.2 coding downstream 546643 45242381 ~ 45245742 (-)
XLOC_011018 si:dkey-33i11.4 coding downstream 556438 45228101 ~ 45235947 (-)
XLOC_011024 ntrk1 coding upstream 1475 45796602 ~ 45854882 (-)
XLOC_011025 afp4 coding upstream 109026 45904153 ~ 45910050 (-)
XLOC_011026 afp4 coding upstream 117520 45912647 ~ 45917683 (-)
XLOC_011027 NA coding upstream 187346 45982473 ~ 45994189 (-)
XLOC_011028 NA coding upstream 292362 46087489 ~ 46097432 (-)
XLOC_010626 CR392024.2 misc downstream 24897210 20895112 ~ 20895175 (-)
XLOC_011016 FP085399.4 non-coding downstream 599233 45186673 ~ 45193152 (-)
XLOC_011015 FP085399.6 non-coding downstream 617825 45174446 ~ 45174560 (-)
XLOC_011012 FP085399.5 non-coding downstream 648013 45140858 ~ 45144372 (-)
XLOC_011011 FP085399.3 non-coding downstream 657906 45130921 ~ 45134479 (-)
XLOC_011029 NA non-coding upstream 400998 46196125 ~ 46203345 (-)
XLOC_011030 BX537142.1 non-coding upstream 421681 46216808 ~ 46216909 (-)
XLOC_011031 CU469499.1 non-coding upstream 545416 46340543 ~ 46340657 (-)

Expression


Co-expression Network