XLOC_011036 (si:dkey-152b24.8)


Basic Information

Item Value
gene id XLOC_011036
gene name si:dkey-152b24.8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46553980 ~ 46558708 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021543
ATGGGAGTTCCAGTGAGATTTCTCTGCGTCTTTGTGCTTCTGCTGCACAAGAGCTTTCAACAACAAGCGTTCAATGATAAGAAAGAACTCAAGCTCAGTGCTAAATATAAAATCGGCTGGATGAGGTCTCTGGATGATAATAAGTTAATTTCTGAAATCAATATTCCTGGTACTCACGACACCATGGCTCTTCATGGAGGACCAGCAGCAGAATGTCAGTCATGGTCACTGGAGAACCAGCTGCTCGCCGGCGTACGCTACCTGGACTTGAGAGTGTCTGGAAATAACCTGAAAGTTGTGCATGGTGTGATTTCACAACATACAACGTTCGCTAATGTTCTCAACATAGTTAAGGGTTTTTTGTCTCAACATAAATCAGAGACAGTGTTGCTAAGAGTCAAGCTCGAGTCAAAGGGCCCATTTCCAGACGATGTTGCAAATCAGCTTAAAAATGATCCTGGATGTTGGGTTAGAAATAAAATACCGCGAATTAGAGAAGTAAGAGGAAAGATTGTTTTTGTTCAGAAAAACAACTTTAAACTGGGAATCCCTATGTTAGAAACTGATAAAAAGGGTGACTATAAAGTAGGTAATGTTGAAAACAAGAAGGATAAAATTATTGAGCATCTGAATCAGGCTTTGGAAGCTTGTAAAGTGAATGAAGTTGTGCTAAACTATTCAAGCGGCACAGGCTGGCCTGTATTTAGACCAGACAAAACCCCAAAGAAAGTGGCCAAAAAAATCAACCCTTGGCTATACAATAATCTTGAAGGCGCttctaaaatgtatataaagCTTTGTTTTGGGGTCATAGCAATGGACTTTCCAGGCTTTGATTTGATTCAAGTGATCATTGGTTTTAACAGATTTTAATGGGTGTTTAGCTTAGAGCCCTGCATTTGAGCCTGAGCCTGCTTTAGAAGAAACTGCAAAACAAAGTTTAATGAGGCAAGTTTGAGATTTCCAGCAAAGTGCAATAGAtagcataaagaaaaaaaatggcaaaGGCGAACTTAAAACTGAAAAAGTCAGGCAAACTTCTGGTCAACTTTTCAAATAGTgaaaactttaaatgatgagagaGCTCGTCATGCACAATGCACAACTTGTAAGTTGAGTAAACCCACTGTGGACCACATACCTGTACCGCTTGGATAtcaatttcacttttaaaaaaataaagcttgcATTAAAAAAACTCCAAACATTTCTCTAAATTATTctgataaaaaaatgaaacaaaaaaactttttattaaatacaaataaggTCTTTTTTATGGCTGTAACATTATTTGGTGGAAAAAAGACAGGCTTATGTCGGACTTGGGCCAAAAATTTTGATAAGGTATTGGACAAAGGCAGGGCTACAGCCTGTGCATCTCGGGCCAGGGCTCAAATTTAAAGGGCTTTAGTTTAGCTGTAATTTTCTGTTCATTACAGTGCATTTGTTAACTAAGCAATCACtttgtgtaaaataatgtttgtatttGCTGTTATGCCAttgaaaaagcattttaatccatcTTTTATTGTTTTGCTCTGCTAATATTTCTGCTTCAGGgtctctttcatttttttttacctttacaaGAGCAgcagttgaaaaaaataaattcttcTTATAAGTGAATTCTTTCCTCTCTcatttatttataacatataTAACAAGTGGTCTAGTCACAGATCGGTATAAACCCATCAGCAAATATGCACTTTTCTGTGATTTACAATGCATTTGTAAGTAAGTTATTGATTTATGAACATCTTTATGTACTGTTTAAAAAGAGGACCTTTAGACATTGCTTTGCAATGCTCCTGATGGATGAGTGGAGGAGTCTCTTTAATCTCTCGGGGTGTAAACCATTCATGAACCTTGTTACTCGCACATAGAGCTGAGATTATCCAAAACAAGCTTAACAAATTCTatttcattgtaatgttttcattgaatgagagaacagaataatttttacATAATCGGGATGTAAATAATCTTGACTTTAAGACTGGTTACTCAATagtcttgttcaggcacattcagttTGTTTTTGGCagcttatttcagctacattctctaaaacctactaactatgcacatttgttttttctaaaaaaatgcaACCATGAACAACAATATCtttcacatattattgtagcacagtttgtgctgaatacaaaataaacacatgttggccagtaCTATGTAATgagtagctgaaataagcacaaatgtcaggaCATGTCAAAATATCCTTAGAGATATTTAGAGATCTATCAAAGTATCTTGGGCCCCCAAATCACCTCAGCAGAGGGTTAATGTAAAGcaagggtcaccaatcctggttctggagggccggtgaccctgcagtgtttagctcgtagctggtttaggtgtgtttgattagggttggagctaaaatctgcaggacaccggccctccaggaacaagtttgatgacccctgatgTAAAGCattaatgtaaaccttaatgtaaaaCAAACCACTGAAcctgttactaaaattaataaatagaccAACCAAAGTGACTGAACTTTGGAATGAAATATCTGTGATaaacagtgggggaaataagtattgaacatgacattat
>TCONS_00021544
AGCTGTGATCTGCAGGCGTTTCTGTTTGTGCATCCTAAAGCGTGAGACAGTGAAGAAGATGGGAGTTCCAGTGAGATTTCTCTGCGTCTTTGTGCTTCTGCTGCACAAGAGCTTTCAACAACAAGCGTTCAATGATAAGAAAGAACTCAAGCTCAGTGCTAAATATAAAATCGGCTGGATGAGGTCTCTGGATGATAATAAGTTAATTTCTGAAATCAATATTCCTGGTACTCACGACACCATGGCTCTTCATGGAGGACCAGCAGCAGAATGTCAGTCATGGTCACTGGAGAACCAGCTGCTCGCCGGCGTACGCTACCTGGACTTGAGAGTGTCTGGAAATAACCTGAAAGTTGTGCATGGTGTGATTTCACAACATACAACGTTCGCTAATGTTCTCAACATAGTTAAGGGTTTTTTGTCTCAACATAAATCAGAGACAGTGTTGCTAAGAGTCAAGCTCGAGTCAAAGGGCCCATTTCCAGACGATGTTGCAAATCAGCTTAAAAATGATCCTGGATGTTGGGTTAGAAATAAAATACCGCGAATTAGAGAAGTAAGAGGAAAGATTGTTTTTGTTCAGAAAAACAACTTTAAACTGGGAATCCCTATGTTAGAAACTGATAAAAAGGGTGACTATAAAGTAGGTAATGTTGAAAACAAGAAGGATAAAATTATTGAGCATCTGAATCAGGCTTTGGAAGCTTGTAAAGTGAATGAAGTTGTGCTAAACTATTCAAGCGGCACAGGCTGGCCTGTATTTAGACCAGACAAAACCCCAAAGAAAGTGGCCAAAAAAATCAACCCTTGGCTATACAATAATCTTGAAGGCGCttctaaaatgtata

Function

symbol description
si:dkey-152b24.8 Predicted to enable phosphoric diester hydrolase activity. Predicted to act upstream of or within lipid metabolic process.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087297

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021543 False 2613 mRNA 0.37 2 46553980 46558521
TCONS_00021544 True 848 mRNA 0.41 3 46555803 46558708

Neighbor

gene id symbol gene type direction distance location
XLOC_011034 tmem176l.1 coding downstream 28825 46518114 ~ 46525155 (-)
XLOC_011033 NA coding downstream 94130 46396002 ~ 46459850 (-)
XLOC_011032 NA coding downstream 160695 46350228 ~ 46393285 (-)
XLOC_011031 CU469499.1 coding downstream 213323 46340543 ~ 46340657 (-)
XLOC_011030 BX537142.1 coding downstream 337071 46216808 ~ 46216909 (-)
XLOC_011037 zgc:174938 coding upstream 8700 46567408 ~ 46573211 (-)
XLOC_011038 si:dkey-152b24.6 coding upstream 17994 46576702 ~ 46579981 (-)
XLOC_011039 BX323793.1 coding upstream 24896 46583604 ~ 46587938 (-)
XLOC_011040 tmem176l.3a coding upstream 37498 46596206 ~ 46619967 (-)
XLOC_011041 NA coding upstream 62495 46621203 ~ 46622443 (-)
XLOC_010626 CR392024.2 misc downstream 25658805 20895112 ~ 20895175 (-)
XLOC_011029 NA non-coding downstream 350635 46196125 ~ 46203345 (-)
XLOC_011045 NA non-coding upstream 237704 46796412 ~ 46798742 (-)
XLOC_011046 NA non-coding upstream 247529 46806237 ~ 46810212 (-)
XLOC_011049 NA non-coding upstream 743738 47302446 ~ 47304669 (-)
XLOC_011054 CR388140.2 non-coding upstream 1384435 47943143 ~ 47943257 (-)

Expression


Co-expression Network