XLOC_011038 (si:dkey-152b24.6)


Basic Information

Item Value
gene id XLOC_011038
gene name si:dkey-152b24.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46576702 ~ 46579981 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021548
ACTTGCACTAGTGTTTAGCAGTGCTGTGATCTGCGGTTGTTTCTCGTCGTGCACCAGAAAGCTTGAGCAAAGGCAATGGAGATGGGAGTTGCTGTTAAAGTTCTCGGTGTCTTTATGCTTCTGCTGCACAACAGTGTTCAACAAGTGTTCAATGATAAGGCGAGACTCCTCCTTCCAGCAGATTATAACATTGCCTGGATGAGAACTCTGgatgataataaattaatttctgcCATCTCTATTCCTGGCACTCATGCCAGCTTGGCTGTTCATGGAGGGCCAGAAGCAGAATGTCAGTCGTGGTCCGTGGAAAGCCAGCTTAAGGCTGGCATACGCTACCTGGAATTGAGTGTGTCTGGAAGAGACCTGAAAGTTGTGCATGGACTGTTTCCTCAATACACCAGGTTCTCAAAGGTTCTCAACACTGTTAAGAAATTCTTGTCTATACATACATCTGAAGTGGTGTTGGTCCGTGTCAAGCACGTGTCATGGGACAGGTTTCCTGTCAAGGTACTTAATCAACTTAAAAATGATCCTGATTGTTGGGTTAGTGATAAAATACCTCAAATTAAAGATGTGAGAGGAAAGATTGTTTTTGTTCAGACAAATGACTTTAAACTGGGAATCTCTCTGATAGAAACTGATGATAAGAATGACTATAAAGTAAGCCATATTGGAGTTAAGGAAGCTAAAATTGCTAAGCATCTGAATGAGGCTTTAAAAGACTGTAAAGCTGATCTTGCTGTGCTGAGCTATTCAAGCGGCACAGGCTGGCCTGTACTGAGACTAGATTTAACTCCTAAAGTGGTAGCAAAAAAGATAAACCGCTGGCTATATGATTATCTTGGAGGCATTTCTTCATTGAAATCAAAACGTTGTTTTGGGATCTTGGCGATGGACTTTCCAGGCTTTGCTTTGATACAACGAATCATTGGTTTTAATTACTAGGTGCTTAAGTGCATTTTGTTAATCCATTTCGTTTGTGCTCTAGCATTGTAATTTGCCTTGTAAAACTCCTTTCAATCATGTAGTCTTGGACAAAAACATctgttgaataaatatttaaaaacaaaaacatctagCGACTCTGATTTCCATGGTCCTTTAGTGCACTTTTTGATTATTGATTAGTGTATGTGATGTAAGAAATTAAGCCTTTATTCTAATATTTGAGCTGTGTAAC
>TCONS_00021549
TCCATCAATACAATCCATCAAGATTCTCAATTCCTTACTTTGTGTTTGCCTGTCGCTGTAAACCTTTGTTGGAAGACTTGCACTAGTGTTTAGCAGTGCTGTGATCTGCGGTTGTTTCTCGTCGTGCACCAGAAAGCTTGAGCAAAGGCAATGGAGATGGGAGTTGCTGTTAAAGTTCTCGGTGTCTTTATGCTTCTGCTGCACAACAGTGTTCAACAAGTGTTCAATGATAAGGCGAGACTCCTCCTTCCAGCAGATTATAACATTGCCTGGATGAGAACTCTGgatgataataaattaatttctgcCATCTCTATTCCTGGCACTCATGCCAGCTTGGCTGTTCATGGAGGGCCAGAAGCAGAATGTCAGTCGTGGTCCGTGGAAAGCCAGCTTAAGGCTGGCATACGCTACCTGGAATTGAGTGTGTCTGGAAGAGACCTGAAAGTTGTGCATGGACTGTTTCCTCAATACACCAGGTTCTCAAAGGTTCTCAACACTGTTAAGAAATTCTTGTCTATACATACATCTGAAGTGGTGTTGGTCCGTGTCAAGCACGTGTCATGGGACAGGTTTCCTGTCAAGGTACTTAATCAACTTAAAAATGATCCTGATTGTTGGGTTAGTGATAAAATACCTCAAATTAAAGATGTGAGAGGAAAGATTGTTTTTGTTCAGACAAATGACTTTAAACTGGGAATCTCTCTGATAGAAACTGATGATAAGAATGACTATAAAGTAAGCCATATTGGAGTTAAGGAAGCTAAAATTGCTAAGCATCTGAATGAGGCTTTAAAAGACTGTAAAGCTGATCTTGCTGTGCTGAGCTATTCAAGCGGCACAGGCTGGCCTGTACTGAGACTAGATTTAACTCCTAAAGTGGTAGCAAAAAAGATAAACCGCTGGCTATATGATTATCTTGGAGGCATTTCTTCATTGAAATCAAAACGTTGTTTTGGGATCTTGGCGATGGACTTTCCAGGCTTTGCTTTGATACAACGAATCATTGGTTTTAATTACTAGGTGCTTAAGTGCATTTTGTTAATCCATTTCGTTTGTGCTCTAGCATTGTAATTTGCCTTGTAAAACTCCTTTCAATCATGTAGTCTTGGACAAAAACATctgttgaataaatatttaaa
>TCONS_00021550
TTGCCTGTCGCTGTAAACCTTTGTTGGAAGACTTGCACTAGTGTTTAGCAGTGCTGTGATCTGCGGTTGTTTCTCGTCGTGCACCAGAAAGCTTGAGCAAAGGCAATGGAGATGGGAGTTGCTGTTAAAGTTCTCGGTGTCTTTATGCTTCTTTGCAGTATTTGACCATTAGAGCGCAGCCTGGGCAAAATGCCTGTTCTGTAAATTGCTGCACAACAGTGTTCAACAAGTGTTCAATGATAAGGCGAGACTCCTCCTTCCAGCAGATTATAACATTGCCTGGATGAGAACTCTGgatgataataaattaatttctgcCATCTCTATTCCTGGCACTCATGCCAGCTTGGCTGTTCATGGAGGGCCAGAAGCAGAATGTCAGTCGTGGTCCGTGGAAAGCCAGCTTAAGGCTGGCATACGCTACCTGGAATTGAGTGTGTCTGGAAGAGACCTGAAAGTTGTGCATGGACTGTTTCCTCAATACACCAGGTTCTCAAAGGTTCTCAACACTGTTAAGAAATTCTTGTCTATACATACATCTGAAGTGGTGTTGGTCCGTGTCAAGCACGTGTCATGGGACAGGTTTCCTGTCAAGGTACTTAATCAACTTAAAAATGATCCTGATTGTTGGGTTAGTGATAAAATACCTCAAATTAAAGATGTGAGAGGAAAGATTGTTTTTGTTCAGACAAATGACTTTAAACTGGGAATCT

Function

symbol description
si:dkey-152b24.6 Predicted to enable phosphoric diester hydrolase activity. Predicted to act upstream of or within lipid metabolic process.

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-31 Predicted to enable phosphoric diester hydrolase activity. Predicted to act upstream of or within lipid metabolic process.

Ensembl:

ensembl_id ENSDARG00000105043

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021548 False 1183 mRNA 0.40 3 46576702 46578523
TCONS_00021549 False 1142 mRNA 0.40 4 46576818 46579981
TCONS_00021550 True 713 mRNA 0.43 5 46577257 46579936

Neighbor

gene id symbol gene type direction distance location
XLOC_011037 zgc:174938 coding downstream 3491 46567408 ~ 46573211 (-)
XLOC_011035 si:dkey-152b24.7 coding downstream 9358 46530244 ~ 46567344 (-)
XLOC_011036 si:dkey-152b24.8 coding downstream 17994 46553980 ~ 46558708 (-)
XLOC_011034 tmem176l.1 coding downstream 51547 46518114 ~ 46525155 (-)
XLOC_011033 NA coding downstream 116852 46396002 ~ 46459850 (-)
XLOC_011039 BX323793.1 coding upstream 3623 46583604 ~ 46587938 (-)
XLOC_011040 tmem176l.3a coding upstream 16225 46596206 ~ 46619967 (-)
XLOC_011041 NA coding upstream 41222 46621203 ~ 46622443 (-)
XLOC_011042 tmem176l.2 coding upstream 59791 46639772 ~ 46645396 (-)
XLOC_011043 tmem176l.4 coding upstream 69488 46649469 ~ 46664465 (-)
XLOC_010626 CR392024.2 misc downstream 25681527 20895112 ~ 20895175 (-)
XLOC_011032 NA non-coding downstream 183417 46350228 ~ 46393285 (-)
XLOC_011031 CU469499.1 non-coding downstream 236045 46340543 ~ 46340657 (-)
XLOC_011030 BX537142.1 non-coding downstream 359793 46216808 ~ 46216909 (-)
XLOC_011029 NA non-coding downstream 373357 46196125 ~ 46203345 (-)
XLOC_011045 NA non-coding upstream 216431 46796412 ~ 46798742 (-)
XLOC_011046 NA non-coding upstream 226256 46806237 ~ 46810212 (-)
XLOC_011049 NA non-coding upstream 722465 47302446 ~ 47304669 (-)
XLOC_011054 CR388140.2 non-coding upstream 1363162 47943143 ~ 47943257 (-)

Expression


Co-expression Network