XLOC_011039 (BX323793.1)


Basic Information

Item Value
gene id XLOC_011039
gene name BX323793.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46583604 ~ 46587938 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021551
CTTAGTGAAGAAGATGGGAGCTCCTATGAAAACTCTCTGTATCTTTGTCCTTCTGCTGCACAAGAGTGCTCAACAACACGTTTTTAACGATCAGGAAACACTCTCTCTGCCTACAAATTATAAAACTGACTGGATGGAAACTCTGGATGGTAATATGTTCATTTCGAACATCACAATTCCTGGCACTCACGACACCATGGCTCTTCATGGAGGAGCAGCAGCAGAATGTCAGTCATGGTCACTGGAGAACCAGCTGCTCGCCGGCATACGCTACCTGGACTTGAGAGTGTCTGGGAATAACCTGAAAGTTGTGCATGGTGTGATTTCACAACATACAACGTTCGCTGATGTTCTCAATATAGTTAAGGGTTTTTTGTCTCAACATAAATCAGAGACAGTGTTGCTAAGAGTCAAGCTCGAGTCAAAGGGCCCATTTCCAGACGATGTTGCAAATCAGCTTAAAAATGATCCTGGTTGTTGGGTTAATAATGAAATACCACAACTTGAAGACGTGAGAGGAAAGATCGTTTTTGTTCAGAAAAAGAACTTTAAACTAGGAGTCCCTCTGTTAGAAACTGATAAAAAGGGTGACTATAAAGTAGGTAATGTTGAAAAAAAGAAAGCTAAAATTATTGAGCATCTGAAACAGGCTTTAGAGCCTTGTGAAGTTAAGGCAGTTGTGTTAAACTATTCAAGCGGCACAGGCTGGCCTTTAGGAAGGTTAGATAGAACACCGAAAAATGTTGCCAAAAAAATCAACCCTTGGCTATACAGTCACCTTGAAGGTGCTTCTAAAGAGAACATCAAGCTTTGTTTTGGGGTAATAGCTATGGACTTTCCAGGTCTTGATTTGATTCAGTTGATCATTAGTTTTAATAAGTAGCTGTGCTACTAAAACCTAACAGCTAATAAGAAGTTGTACTCTCTGTCATGTCAATGATAAGGCATTTCATCATTCACGTGTTTGACTACATATAGAGTGCTCAgaatatatgagtacacccctcacacacccaggctcattctgattatgtaccccctatacatttctgaagagcactaaatacgtcccaggagctatggttttttttttttgtgtgcagtttTTCATTtgcgcgaatccaccagagaccactgtggatgctttttgagatctcaaatttcttttgcgagtGCATTCGCGCATgcttttctcatgtaaatccactagaggctgctgttgacagactgactgaccaactgattgATCATCCCAcccccaactgatagtgttttcaaaagcaccgattgacctgctcACCCACcgtaaacccaaccgacaatgtTTTGAAAACCAAGCCAGAAAAGAAAAgcctgcctgatttttaccacattttcagattttaccacattctcaccctgttatttacttgcttattttatttttggcttttttttgtttgtttgtttgttttatctgcttttTTGAAACCATTCTTTGCAGAACTCaatgtcaactcctctctgcgtctcaaatcctcCAATGTATGcaacaagccactggacaaacttgtTGCCGtctatatggaggtaagcggtcagctggtcaGCATGAAAAGGAACAGTCTCATACCGctccgtagcattcgttttaaagacgaaatgcagccacacgtacttctgactacataattcgggatcgccagaaatgtatatagggctacgttttcagaatgatcctatCGTTCACAAATCTACCtgctaaattaatattttctagaGAATGCTTTAGattatgtgtgcatatttattaaatttgtgagtgctgaagccaaatctggagctacaATTACATAATAAGTGTCCAGAAATGAGTAAACATTTATATATGAgggaaaatattacataaaatgttttaaaagagtaaaaatccagagaaacaaaaaaattattatagttAAAATGCTGTTGTCTTTtgcaatatttcatttcatttgaattaaaatgtgttatctttatttataaaaatgtctgGTGATCAAACTCTTTACTTTaatgaatatatctgtttaataaatctgttttgttcaaatgcattaACAattattacctatattcactcagaagtggataaaaatattcattttcaggatggggtgtactcaattgtgctgagcactgtatactttttaattttctggttgtgttttctttctttcttatcttTAAACTGTGTAATCTTGATGGCATCAGTTGAATAAAGCATTACAAAAACTTCTAATGAGTGACGCTTTCATTCAGGTAGTGCAGGGGCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104134

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021551 True 2294 mRNA 0.38 2 46583604 46587938

Neighbor

gene id symbol gene type direction distance location
XLOC_011038 si:dkey-152b24.6 coding downstream 3623 46576702 ~ 46579981 (-)
XLOC_011037 zgc:174938 coding downstream 10393 46567408 ~ 46573211 (-)
XLOC_011035 si:dkey-152b24.7 coding downstream 16260 46530244 ~ 46567344 (-)
XLOC_011036 si:dkey-152b24.8 coding downstream 24896 46553980 ~ 46558708 (-)
XLOC_011034 tmem176l.1 coding downstream 58449 46518114 ~ 46525155 (-)
XLOC_011040 tmem176l.3a coding upstream 8268 46596206 ~ 46619967 (-)
XLOC_011041 NA coding upstream 33265 46621203 ~ 46622443 (-)
XLOC_011042 tmem176l.2 coding upstream 51834 46639772 ~ 46645396 (-)
XLOC_011043 tmem176l.4 coding upstream 61531 46649469 ~ 46664465 (-)
XLOC_011044 FO082781.1 coding upstream 172687 46760625 ~ 46766153 (-)
XLOC_010626 CR392024.2 misc downstream 25688429 20895112 ~ 20895175 (-)
XLOC_011033 NA non-coding downstream 123754 46396002 ~ 46459850 (-)
XLOC_011032 NA non-coding downstream 190319 46350228 ~ 46393285 (-)
XLOC_011031 CU469499.1 non-coding downstream 242947 46340543 ~ 46340657 (-)
XLOC_011030 BX537142.1 non-coding downstream 366695 46216808 ~ 46216909 (-)
XLOC_011029 NA non-coding downstream 380259 46196125 ~ 46203345 (-)
XLOC_011045 NA non-coding upstream 208474 46796412 ~ 46798742 (-)
XLOC_011046 NA non-coding upstream 218299 46806237 ~ 46810212 (-)
XLOC_011049 NA non-coding upstream 714508 47302446 ~ 47304669 (-)
XLOC_011054 CR388140.2 non-coding upstream 1355205 47943143 ~ 47943257 (-)

Expression


Co-expression Network