XLOC_011044 (FO082781.1)


Basic Information

Item Value
gene id XLOC_011044
gene name FO082781.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46760625 ~ 46766153 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021560
ATGCCTAGCTTGCTGGTTCTAGCAGGGATCATGGAGAAAAATGGGGGCTACGGCGGAGATTTAGCCGGCTCCGGCTTCGGCAGCGAAGGTCTCCTAGTGCCAcccgaggaggaggaggacgatTCCCGTGCCCTTAGAGTTGCGCTGGGCCAACTGTCGCTGCTGGGTCTTGGAGAGGGCGAGGACGGGGCTCCTGCGGgtggaggtggtggtggtggaggaGTTCAAGACAGGAGTAATAATAACCACCACAACCACATCCAAGCCGAGCCGGGGATGTTACAAGGGAAGAATAAGTTGTGCGCCCTGTACGAGAGCTCGCCGACCGAAACCAAAGGACGGGGCTGCAACATAACGGAGTGCGTCCCCGTGCCAAGCTCCGAACATGTGGCCGAAATAGTGGGGAGACAAGGTTGCAAAATCAAAGCTTTGCGTGCAAAGACAAACACCTACATCAAGACCCCCGTCAGAGGTGAAGAACCAGTCTTCCTCATCACCGGGCGCAAAGAGGATGTGGCCCTGGCCAGACGTGAAATCATCTCAGCTGCAGAGCACTTCTCCATGCTGCgggcctccaggaacaagttcaGCGGCTCTCCTCCTGCACCTCTACCTGGCCAGACCACCATACAGGTGCGGGTTCCCTACCGGGTTGTGGGTTTGGTGGTCGGACCCAAAGGCTCGACTATAAAACGCATCCAGCAGCAAACGTGCACTTACATCGTCACTCCCAGCCGCGACCGTGACCCCGTCTTTGAGATCACAGGCTCCCCTGGGAACGCCGAACGGGCTCGGGAAGAAATCGAGGCGCACATCGCCTTCCGCACAGGTGGCCTGCACGATCACAACAATGAGAATGACTGCTTGGGCCCTGAAAGTGGCAACGGGGGTCTGGAGAGCCGCCTGCAGCAGGTGTGGGGGCTACAGGGGGCCCCGCGGAAGCCGCTTGCCAGCAGCTACCGCCAGAATTTCTCAGACACCGTGGTCGGAAGTAgcagtggaggaggaggagggattTACAGTAAAGGTGACTTTAACAACCATGGCAGCAGCGGGGACAAGCCGTCCTCCTACTTCGGCTCCGAGGGCACTCAAAGCTGGGGCGATCCCGACTATCCCAAACAGGTGGCTTACTATGCCCAGCAGCGCTCCAAAAGCTTTGGAGGCCTGCCTCTTCCTCTGACCAGACTGTCACCGGGTTTGCCCGAACCATGCGGAACCGGCAACTCCAACGCTGTTGGGTCTCCTCACGCCCAGGCTCGCCGTGCCCACAGCGAGCCCACCGCTGCCACCGGGGCATTCACCGGACGTCTGCCTGTGCCGGATTCTCCGCCTGCCATGTCTCGGGACTGCATGACCTGTTTCGAGAGCAAGGTGACGGCTGCTTTGGTCCCGTGTGGTCATAACCTCTTCTGCATGGAGTGTGCCATCCGAATTTGTGAGCTAAATCATCCAGAGTGCCCTGTTTGCCACACCCTGGTCACACAGGCTATTCGAATATTCTCTTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000076638

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021560 True 1509 mRNA 0.59 2 46760625 46766153

Neighbor

gene id symbol gene type direction distance location
XLOC_011043 tmem176l.4 coding downstream 96160 46649469 ~ 46664465 (-)
XLOC_011042 tmem176l.2 coding downstream 115229 46639772 ~ 46645396 (-)
XLOC_011041 NA coding downstream 138182 46621203 ~ 46622443 (-)
XLOC_011040 tmem176l.3a coding downstream 140658 46596206 ~ 46619967 (-)
XLOC_011039 BX323793.1 coding downstream 172687 46583604 ~ 46587938 (-)
XLOC_011045 NA coding upstream 30259 46796412 ~ 46798742 (-)
XLOC_011046 NA coding upstream 40084 46806237 ~ 46810212 (-)
XLOC_011047 LO017877.2 coding upstream 431959 47198112 ~ 47245563 (-)
XLOC_011048 mios coding upstream 506672 47272825 ~ 47301376 (-)
XLOC_011049 NA coding upstream 536293 47302446 ~ 47304669 (-)
XLOC_010626 CR392024.2 misc downstream 25865450 20895112 ~ 20895175 (-)
XLOC_011033 NA non-coding downstream 300775 46396002 ~ 46459850 (-)
XLOC_011032 NA non-coding downstream 367340 46350228 ~ 46393285 (-)
XLOC_011031 CU469499.1 non-coding downstream 419968 46340543 ~ 46340657 (-)
XLOC_011030 BX537142.1 non-coding downstream 543716 46216808 ~ 46216909 (-)
XLOC_011054 CR388140.2 non-coding upstream 1176990 47943143 ~ 47943257 (-)
XLOC_011055 NA non-coding upstream 1277231 48043384 ~ 48056492 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_01045587_01050470 MEX3A coding CI01000027 null 1043392 ~ 1050863 (+)