XLOC_011048 (mios)


Basic Information

Item Value
gene id XLOC_011048
gene name mios
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 47272825 ~ 47301376 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021562
ACATTCTGCGATGCTTCCGACTTCACACAAACCAAACAAACTTCAGCATGTTTGCACGTCAAATCTGTCAGCACTGAACAAGCCACTGTCCTGCCATGTCGAGCGGCTATAAGCCAGATATCCTGTGGTCTCCTCATCACGCAGACCGCTATGTGATCTGCGACACTGAGCTCAGTCTGTACCGGATCGGACCTTCTGGAAGCTCCGAAACCAAAGCTGGAGCTCTTCAGTTATCCGAGGAGACGGCAGCGACGCTGCTGGCCATCAACTCCGACACCCCCTTTATGAAATGCGTGGCCTGGTATCCCAAACATGAGCCAGAGTGTTTGTTAGCTGTGGGACATACCAATGGCCGAGTCGTGTTAACCAGTTTGGGACAGAGCCACAACTCCAAAAGTAAGGACCTCGCGGGTAAAGAGTTTGTTCCTAAACACGCTCGGCAGTGCAACACTCTCGCGTGGAACCCTGTGGACAGTAACTGGCTGGCGGCTGGTTTGGACAAACATCGGGCTGATTTTTCCGTTCTCATATGGGACATCAGCAGTAAGTTTTCTCCGGAAGCCGTTCCCGCTGAGAAGGTTCGTCTTTCTGGAGACGCAGACTCTGGTTTGCTGGTGACCAAACCTCTGTATGAGCTGGGTCAAAACGATGCTTGCCTTTCTCTCTGCTGGCTCCCTCGTGACCACCAAAAGTTGCTTCTTGCCGGCATGCATCGAAATCTTGCCATCTTCGATCTGCGTAACACCAGCCAGAAGACGTTTGTGAATACTAAAGCAATTCAGGGCGTAACTGTAGACCCTCATTTTCAGGATCGTGTGGCGTCTTATTTTGAAGGTCAGGTTGCTATTTGGGATTTGCGCAAATTCGAAAAACCAGTTTTTACTTTAAACGAACAGCCTAAACCTTTGACTAAAGTTGCATGGTGTCCTACTCGGATGGGTTTACTAGCGACGCTAACACGGGACAGCAATATCATCCGGCTGTATGACATGCAGCACACTCCGATGCCTTTCGGGGATGAAGTAGAGCCCACCATCATGGAGCGTGGGGTGCAGCCCTGCAGCGAGAGCATCATCAGCAGCTTCGCCTGGCACCCGTCAGCACAGAACCGCATGGTGGTGGTGTCCCCCAGCCGCGTGATGAATGACTTCACATTGTTCGAGCGCATCTCTCTGGCCTGGAGCTCCACCACATCTCTGATGTGGGCTTGCGGACGGCACCTGTACGAGTGTGCGGAGGACAGCGGACAGGCCGCAGAGGCTGAGAAGGACATCGCCACTAAGATGAGGGAGCGAGCACAGTCTCGATATGGCCACGATACTGTCCAGGTGTGGAGGAACCATGTGCTGGCTGGAGGAGACGACCCACAGCTGAGGTCTCTCTGGTACACACTCCATTTCATGAAACAGTACACTGAGAATGTGGAACAGAAGCAACAGAGCAATAAACAGTCCCTCATCTACTCCGGCATCAAAAACATTGTCAAGTCCAGCTCTGGCACTACAGAGACACGGCGGTGCTGGTCAGGTTCAGACAGGCAGACGGACGTCCCACGGTTCCACAGTGAGGAGCGCAGTCTGGCCCTCCAGTTGTGTGGCTGGATCAGTCAAGGGCCCGACACCGATGTTGAACCCTTCCTGAAGTCTCTGGAGCAGGAGGGCGAGTGGGAACGAGCTGCTGCCGTCGCCCTCTTTAACCTGGACATCCGGCGGGCCATTCAGATCCTGAATAAAGGAGCTTCCTCAGAGAAAGGTGATCTGAATCTGAATGTGGTGGCTATGGCTCTGTCTGGCTACACCGATGAGAAGAACTCACTGTGGAGAGAGATGTGCAGCTCTCTTAGACTCCAGCTGAAGAAGCCCTACCTGTGCATCATGTTTGCCTTCCTCACCAGTGAGCCTGGGGCCTATGATGGCGTATTGTATGAGAGTCGTGTGGCGGTCAGGGACAGAGTGGCCTTTGCGTGCATGTTTCTAAATGATGCTCAGTTGCCTCGTTACATAGACAAACTGACCAATGAGATGAAGGAGGCTGGTAACCTGGAGGGAATCCTGCTAACAGGACTGACCAAAGACGGAGTCGACCTCATGGAGAGTTACGTAGACCGAACGGGAGATGTACAGACAGCCAGCTTCTGCATGCTTAAGGGTTCCCCAGGAGAGGTGCTGAAGGACCCTCGGGTGCAGTGTTGGATCGAGAACTATCGTAACCTGTTGGACGCCTGGAGGTTCTGGCATAAACGGGCTGAATTTGACATTCATAGAAGCAAATTGGATCCCAGCTCAAAACCACTTGCACAGGTGTTTGTCAGCTGCAATTTCTGTGGGAAGTCTATATCATACAGCTGCTCAGCGATGCCACATCAGGGCCGTGGGTTCAGTCAGTACGGGGTCAGCGGGTCACCCACCAAGTCAAAGGTCACCAGTTGCCCGGGCTGTCGTAAACCACTCCCACGCTGTGCCCTCTGCTTAATGAACATGGGCACCCCTGTTTCCAGCTGCCCAGGCACAGGAAAAGCAGACGAGAAAGCTGATCTTACACGAGACAAAAAACTAGCGCAGTTTAATAACTGGTTTACCTGGTGTCACAACTGCCGGCATGGTGGCCATGCGGGTCATATGCTTAGCTGGTTCAGAGATCACAGTGAGTGTCCCGTGTCAGCGTGCACCTGTAAATGCATGCAGCTGGACACCACAGGAAACCTGGTGCCTTCAGATAGCGTATAGAAGCCTTTCTGCCTTTTGATTTCAAACTTAAATCTCCCACATACTAGAAACCAGCTACCCACGCTAGTACTGTAAGTTCCCACAGTTTCAGTGAGTCAAAGACGAGCATATGTGTCTTTCTGAAGCATTCTGCACACCTCATGTCCACGACAGGTGCTCTATTGTTGCAGAAACTAAAGCAGTTAGATAGGATTATGTTACCCGTGATTAACTCACCCACCCCACAGGCAGTTGAGCAGGGGGTCCGTGTGAATGTCTGACCAGTGCATTTGCGGTCCAGCAAATAAAACTATTTCAGTGTTGACTTGGGAAGAGAAATATTACAAAATGTTCATTTCAACTCAAGGAAAACCTTAGAGAATGCATTTGTGGGTGCATATTTATTGCAAATGACTCTAGTCTATACCACACTGAAGCTCAATCAGATGTTAAAAACTGATTTGTAAGAGAGCTAACAAAGATATTAGCATTGAGAATGTTGAATGTTTTACAAATGCAGGTCAAAAGAAATGATCTTCACTGGGAAGTTGTTCcattaaagtattttatttgtttaaataacgCTTTTAACAAATTTACACCGTGATTTtgctgatttttgtttgtttaaatgtgtaGGGTTAACagttctgttttatttgttgaaAATGAAGACAATGTAAGATGACATTTTGTAGTGCTTACATTAATTTATTGCACAATCAATGCAATGACAACTTAACATCCTTACTATTTAAACGATTGTCTGAtgtttttgagaaaaagaaagaaCTTTCATTGAGGGACTACTGTTATTAAACACTTTTGAGTTGTT

Function

symbol description
mios Predicted to be involved in cellular response to amino acid starvation and positive regulation of TOR signaling. Predicted to be located in lysosomal membrane. Predicted to be active in cytoplasm. Orthologous to human MIOS (meiosis regulator for oocyte development).

GO:

id name namespace
GO:0034198 cellular response to amino acid starvation biological_process
GO:0032008 positive regulation of TOR signaling biological_process
GO:0005764 lysosome cellular_component
GO:0005765 lysosomal membrane cellular_component
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko04150 mTOR signaling pathway

ZFIN:

id description
ZDB-GENE-040426-856 Predicted to be involved in cellular response to amino acid starvation and positive regulation of TOR signaling. Predicted to be located in lysosomal membrane. Predicted to be active in cytoplasm. Orthologous to human MIOS (meiosis regulator for oocyte development).

Ensembl:

ensembl_id ENSDARG00000102587

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021562 True 3540 mRNA 0.49 11 47272825 47301376

Neighbor

gene id symbol gene type direction distance location
XLOC_011047 LO017877.2 coding downstream 27262 47198112 ~ 47245563 (-)
XLOC_011046 NA coding downstream 462613 46806237 ~ 46810212 (-)
XLOC_011045 NA coding downstream 474083 46796412 ~ 46798742 (-)
XLOC_011044 FO082781.1 coding downstream 506672 46760625 ~ 46766153 (-)
XLOC_011043 tmem176l.4 coding downstream 608360 46649469 ~ 46664465 (-)
XLOC_011049 NA coding upstream 1070 47302446 ~ 47304669 (-)
XLOC_011050 LO017849.1 coding upstream 47390 47348766 ~ 47381652 (-)
XLOC_011051 sept7b coding upstream 88163 47389539 ~ 47427016 (-)
XLOC_011052 cthrc1b coding upstream 153210 47454586 ~ 47483142 (-)
XLOC_011053 csmd3a coding upstream 230140 47531516 ~ 48074540 (-)
XLOC_010626 CR392024.2 misc downstream 26377650 20895112 ~ 20895175 (-)
XLOC_011041 NA non-coding downstream 650382 46621203 ~ 46622443 (-)
XLOC_011033 NA non-coding downstream 812975 46396002 ~ 46459850 (-)
XLOC_011032 NA non-coding downstream 879540 46350228 ~ 46393285 (-)
XLOC_011054 CR388140.2 non-coding upstream 641767 47943143 ~ 47943257 (-)
XLOC_011055 NA non-coding upstream 742008 48043384 ~ 48056492 (-)
XLOC_011056 NA non-coding upstream 917990 48219366 ~ 48220310 (-)
XLOC_011061 NA non-coding upstream 1518974 48820350 ~ 48821345 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_00765527_00776450 MIOS coding CI01000027 null 765467 ~ 776763 (+)