XLOC_011055


Basic Information

Item Value
gene id XLOC_011055
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 48043384 ~ 48056492 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021839
tgactgggtcagttgacatttctgtgtgaagtttgcatgttctccctgtgttggcatgggtttcctccgggtgctccggtttccaaagaAGTGCTATAGACGAAatgggtaagataaattgtctagtgtatgtcctggtcctccaggttgggggatGAGCGCTGGGCTAACGACCCATCTTGTAAAAATTTGATGTTACGAAATGCCAACATTGTGTGACTAAAATATCAACTTTAATATAAACAGCCCTGGTAcaaactaaataatgagaaagagtaaaaaagaaagagaaagaaagaaataaagataaaaagaaagaaagaaagaaagaaagaaagaaagaaaaaaagaaagaaaaaaagaaagaaaaaagaaagaaaaaaagaaagaaagaaagaaagaaagaaagaaaacaaacaaaagcgaacgaaagaatgaaagagaaaaaagaaagaatgaacaaaagaaagaaggaaTGAAAGAGTGCAAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021839 True 491 lncRNA 0.35 2 48043384 48056492

Neighbor

gene id symbol gene type direction distance location
XLOC_011054 CR388140.2 coding downstream 100127 47943143 ~ 47943257 (-)
XLOC_011052 cthrc1b coding downstream 560242 47454586 ~ 47483142 (-)
XLOC_011051 sept7b coding downstream 616368 47389539 ~ 47427016 (-)
XLOC_011050 LO017849.1 coding downstream 661732 47348766 ~ 47381652 (-)
XLOC_011049 NA coding downstream 738715 47302446 ~ 47304669 (-)
XLOC_011056 NA coding upstream 162874 48219366 ~ 48220310 (-)
XLOC_011057 eif3ha coding upstream 225829 48282321 ~ 48400639 (-)
XLOC_011058 rad21a coding upstream 352574 48409066 ~ 48430272 (-)
XLOC_011059 notchl coding upstream 588725 48645217 ~ 48673938 (-)
XLOC_011060 FQ976914.1 coding upstream 734734 48791226 ~ 48914757 (-)
XLOC_010626 CR392024.2 misc downstream 27148209 20895112 ~ 20895175 (-)
XLOC_011046 NA non-coding downstream 1233172 46806237 ~ 46810212 (-)
XLOC_011045 NA non-coding downstream 1244642 46796412 ~ 46798742 (-)
XLOC_011041 NA non-coding downstream 1420941 46621203 ~ 46622443 (-)
XLOC_011061 NA non-coding upstream 763858 48820350 ~ 48821345 (-)
XLOC_011062 NA non-coding upstream 1099368 49155860 ~ 49184484 (-)
XLOC_011063 NA non-coding upstream 1158986 49215478 ~ 49222093 (-)
XLOC_011064 NA non-coding upstream 1179916 49236408 ~ 49237101 (-)

Expression


Co-expression Network