XLOC_011061


Basic Information

Item Value
gene id XLOC_011061
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 48820350 ~ 48821345 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022268
AGgcgatcgtcaactatGTAGCGGACCTGTACCGCCAACTAATGTAGTACCCATACTACTGTAatcgttgggtttagggtagggggacgTGTAGACGATCATCAACTACCGCCCACTAAGTTAATGCcaatgctactgtgatggttgcgtttagggtagggggaggtgtaggcgattgTCAACTATGTAGCAAATCTGATCGACTACGTCATCAAGCAGTGGGCTGTCTCGATAATTCTGGGTGACTGCCACAAGAGACGTGTTTCAACAGTCGTGTCCGAATGTCATGTGCTGTGAAAAGACAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022268 True 306 lncRNA 0.49 2 48820350 48821345

Neighbor

gene id symbol gene type direction distance location
XLOC_011059 notchl coding downstream 146412 48645217 ~ 48673938 (-)
XLOC_011058 rad21a coding downstream 390078 48409066 ~ 48430272 (-)
XLOC_011057 eif3ha coding downstream 419711 48282321 ~ 48400639 (-)
XLOC_011056 NA coding downstream 600040 48219366 ~ 48220310 (-)
XLOC_011055 NA coding downstream 763858 48043384 ~ 48056492 (-)
XLOC_011062 NA coding upstream 334515 49155860 ~ 49184484 (-)
XLOC_011063 NA coding upstream 394133 49215478 ~ 49222093 (-)
XLOC_011064 NA coding upstream 415063 49236408 ~ 49237101 (-)
XLOC_011065 satb1b coding upstream 571855 49393200 ~ 49505275 (-)
XLOC_011066 efhb coding upstream 808541 49629886 ~ 49646625 (-)
XLOC_010626 CR392024.2 misc downstream 27925175 20895112 ~ 20895175 (-)
XLOC_011054 CR388140.2 non-coding downstream 877093 47943143 ~ 47943257 (-)
XLOC_011049 NA non-coding downstream 1515681 47302446 ~ 47304669 (-)
XLOC_011046 NA non-coding downstream 2010138 46806237 ~ 46810212 (-)
XLOC_011068 CR855313.1 non-coding upstream 1174133 49995478 ~ 49995594 (-)
XLOC_011073 LO018246.1 non-coding upstream 1817325 50638670 ~ 50638786 (-)
XLOC_011053 csmd3a coding downstream 745810 47531516 ~ 48074540 (-)

Expression


Co-expression Network