XLOC_011069 (nek10)


Basic Information

Item Value
gene id XLOC_011069
gene name nek10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 50114739 ~ 50157187 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021593
AATGCTTGACGACCTTCAGCAATGCGAGTAAAAAACACGGAACATTCCAGAACCACACAGAAATGAGAGTAATGAAGGTTGTTTCAAGATGCCTCTCCAAGACAGAAAGTCTAGAGGACCGAACAGATCACATCAGAAAACTAAAGACAAggAGCTTCTTGATCTCAAGAGACTTTTATCAATGATCACAGCTCCAATATCCAAACAGGCTTCATCTCTGAGTCAATCAAAAGGACACAAGTCTCAAACTTCCACAAATGTTCCTGAGCACCGGAAAAATGCCACTGAAGCGTCTGAGCTGGAAAACTTTAGCGTGACATACAGAAAGCAGAGATATTTCAATGACCAGCCACATCACAGATTATTCCTGGACATCTTCACTGCCTTGATCAATAACAGGCTTGGTTGTAGCGACTGGCTGGAAAATTCCTCTTCAGATAATGTTTTAAGAGTTCTGAACTGCCTGAGATTGCTGATCAGGGATCCTCTTCACCAGTCACATGTGGAAATTCACTGTGCTTTATCGAATGTTTTTCAGCACATGGAGTCGGTTGCATCTGTGTATCTCGAATGCGGAGAACAGACGCTGGAAATCGAGCAGCTGGTAGCAATGACATATATCTTTCAGAAGTTGTCTACTGTTGAGGAGCAAAGACAGTGGATTATTAATTGTGAAGCACATAAGACGCTCGTGAAGCTGCTCTCAACCCGGGACTGCAGTGTTGTATTAGGAGCTCTTCTGGCTCTAACCACACTTGCTGAAAGTCAAGAATGCAAAGAGAAGATCGGCGAGCTTTCAGTTGTGGAGCATCTTCTAGATGTTTTGCAAGATTATGACATGTTATCGAAAAGGCTGAGCGCGGAGCTGCTGAGGTTGCTTTGCTCGGTGCAGTGTGTGCGGGATCAGCTGCGTCAGTGTGATGGTGTGCCGGTTCTGCTCAGTCTCCTGCACTCAGAGCACATCAAGCTGCTGTGGAGCACTGTTTGGGTTCTCGTTCAGCTCTGTCAGGATCCCGACACCAGCGCTGAGGTCCGGGCCTGGGGCGGCGTGCAGCAACTACTGCGCATCTTACATGGAGAACGAGTGTATGTGTCCGATCGCTCCACCATTGATTCAATTTCCAGCGCCAATGCAGCAGGCAGAATCCACAGTCAGCAGGTGTCAGCAGTGGTGTGCGCTCATGAAACAGCGGAGAACACCATCAGTCTGCAGTCAGCATGCTGTGCAGCGATAACCGAGCTTGTATTGGATGATACGACAGCGCATAATGTGGTGCAGGAGAACGGTGTGTATATTATTGCCAAATTGATTTTGCCACAGAATGGTAAAGAACCTCAAGCAAAATCTCTACAGtgttatgCTTTCAGAGCACTGCGATTCCTCTTTAGTATGGAACGCAACAGACATCACTTTAAAAGGCTGTTTTCTCCAGATTTGTTTGAGATGTTTATCGATGTCGGTCACTACGTTCGAGACATTACTGCATATGAACCGCTGCAACAGAAAATCATGCTTTTATCTCCAGAAGAGTTGGATATTCTTAGGGAAAGCATCGAGACAGTAAACCAGAACCGTCCTCCTATAAGAGTGGTCAATGGTTATGCGGTTTTGGAGCATCTAGGAAGCGGAGCTTTTGGCAGCGTCTTTAAGGTTCGTAAGCAGAACGGACAGAACATTCTGGCACTTAAAGAGGTCAACTTTCACAATCCGGCCTTTGGCAAAGATAAGCGATCCAGAGACAGCAGTGTTGAGAAGATTGTGTCTGAAATGACCATCATTAAAGAACAGatgtCTCATCCGAACATTGTAAAatacttcaaaacatttttagaaGGTGATAAACTCTACATTGTAATGGAGCTCATTGAAGGAGCTCCTCTGGCTGAGCATTTCAGCTCTCTGAAAGAGAAAAAGCAGACGTTCACCGAGGAGAGAGTCTGGAACATCTTCATACAGATCTGTTTGGCTTTGAGATACTTGCACAAGGAGAAGCGGATCATCCACAGAGATCTCACACCCAATAATATCATGCTCGGAGAGAGAGATAAAGTCACCATTACTGACTTTGGTCTTGCTAAACAGAAACAAGAGAACAGTAAGCTGACATCAGTGGTGGGGACGATACTGTACTGCTGcCCAGAGATTGTGAAGAACGAGCCGTACGGTGAGAAGGCAGATGTTTGGGCCGCCGGCTGTATCCTCTATCAGACGGTCACTCTCAATCCTCCGTTCTACAGCGCTAACATGCTCTCGCTCGCTACTAAGATTGTGGAAGCTGTTTATGAGCCACTAGAAGACAAAACCTTCTCCGAAAGAGTAACCGACATGATTAAATGGTGTTTGACTCCAAATGCAGACGTCCGTCCAGACATCATCGAGGTCAGTTCCAGAATCTCTGATATCATGATGAGGTTTGTGGATAGTCTCTGtgtatcccataatgcactggaGAGAAGGGCGGAGCGAGACAGGAAGAGAGCGCAGAAGTACTTTCTGGAGAGCAACAGGACTAGAATGTGTGGCCCGATACAACAGCTCCCTCCAGCACCACAAAACAGCTTCAAGCAGCGGGCAATTGAACGCTTTAAGAAGTCGCTCTTCATATATGGAAGTGATGCATACAATCTCAAAGTGGAGCTCAATAAGGTTCTTCAAGGCAGTCAGGAGCTGGTAGAGATGTCTTCAGCCAGCAGAGAGTGGTGGTCCATGATTCAGTCTCTAAGCTCAGACCCCTCAAACGCAGAAAATCGGGAATCAGGTTACTCCAGTCTTCAAGACGGCCTCACATATGAAGATATACAGAGTATGGTGGAGGATGTGCTGGAGGAGAACGGATATTACAGCAGAAGAGATCTGGATTCAGGAGCAGCAACAAGACAAACTCAAACTCCCTGATCGATCGACCGtcagtgattgattgattgacagctgtcatGTCTGGA

Function

symbol description
nek10 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in positive regulation of MAP kinase activity and regulation of cell cycle G2/M phase transition. Predicted to act upstream of or within protein phosphorylation. Is expressed in female organism. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 44. Orthologous to human NEK10 (NIMA related kinase 10).

GO:

id name namespace
GO:0043406 positive regulation of MAP kinase activity biological_process
GO:0006468 protein phosphorylation biological_process
GO:1902749 regulation of cell cycle G2/M phase transition biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
ko01001 Protein kinases
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-130530-570 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in positive regulation of MAP kinase activity and regulation of cell cycle G2/M phase transition. Predicted to act upstream of or within protein phosphorylation. Is expressed in female organism. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 44. Orthologous to human NEK10 (NIMA related kinase 10).

Ensembl:

ensembl_id ENSDARG00000025335

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021593 True 2943 mRNA 0.46 30 50114739 50157187

Neighbor

gene id symbol gene type direction distance location
XLOC_011068 CR855313.1 coding downstream 119145 49995478 ~ 49995594 (-)
XLOC_011067 znf385d coding downstream 268380 49729339 ~ 49846359 (-)
XLOC_011066 efhb coding downstream 468114 49629886 ~ 49646625 (-)
XLOC_011065 satb1b coding downstream 609464 49393200 ~ 49505275 (-)
XLOC_011064 NA coding downstream 877638 49236408 ~ 49237101 (-)
XLOC_011070 lim2.5 coding upstream 9234 50166421 ~ 50181206 (-)
XLOC_011071 vsig10l coding upstream 26003 50183190 ~ 50203058 (-)
XLOC_011072 etfb coding upstream 57632 50214819 ~ 50229274 (-)
XLOC_011073 LO018246.1 coding upstream 481483 50638670 ~ 50638786 (-)
XLOC_011074 si:ch73-90p23.1 coding upstream 731931 50889118 ~ 50897887 (-)
XLOC_010626 CR392024.2 misc downstream 29219564 20895112 ~ 20895175 (-)
XLOC_011063 NA non-coding downstream 892646 49215478 ~ 49222093 (-)
XLOC_011062 NA non-coding downstream 930255 49155860 ~ 49184484 (-)
XLOC_011061 NA non-coding downstream 1293394 48820350 ~ 48821345 (-)
XLOC_011077 FP243388.2 non-coding upstream 778003 50935190 ~ 50935306 (-)
XLOC_011078 FP243388.1 non-coding upstream 804059 50961246 ~ 50961362 (-)
XLOC_011080 NA non-coding upstream 921480 51078667 ~ 51080430 (-)
XLOC_011087 CABZ01074290.1 non-coding upstream 1598205 51755392 ~ 51755506 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000086_00544490_00561333 NEK10 coding CI01000086 null 544150 ~ 564184 (-)