XLOC_011072 (etfb)


Basic Information

Item Value
gene id XLOC_011072
gene name etfb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 50214819 ~ 50229274 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021597
ACATTAAAGCCCGCCCTAAACGGTGTCACAGCAGCACTACTCCGGGTGGATTTTCCTACTGAACCGTCAGAGCAAAGATCCACGATGAGCGCCCGAGTTCTGGTCGGAGTTAAACGGGTCATTGACTATGCAGTCAAGATCCGAGTCAAGCCTGACCACACTGGAGTGGTCACAGACGGTGTGAAGCACTCGATGAACCCCTTCTGTGAGATCGCAGTGGAGGAGGCTGTCAAACTCAAGGAGAAGAAGCTGATTAAGGAGGTTGTGGCCGTCAGCTGCGGCCCTCAGCAGGTCCAGGAGACAATCCGGACGGCTCTGGCCATGGGAGCAGACCGTGGCATTCATGTGGAAGTTTCCGGAAAAGACTACGAGACTCTCGGCCCTCTACAGGTCTCCAAGATTTTAGCTGCTCTCGCTAAAAAGGAAGAAGCCAGTCTGATTATTCTGGGGAAACAGGCCATAGATGATGACTGCAATCAAACTGGACAGATGACTGCAGCTCTACTGGACTGGCCACAGGGCACTTTTGCATCCGAGTTGGCTTTTGAAGCTGACAAGCTGAAGGTGGTGAGAGAAATAGATGGTGGATTGGAGACCATTAAGATCAAAATGCCCGCTGTAGTGACGGCTGATCTCCGGCTCAACACTCCCAGATACGCCACACTGCCCAACATCATGAAagcgaagaagaagaagattgcGATGGTGAAGCCAGCAGATCTGGGTGTAGACGTAAGCTCGCGGCTGGAGGTGCTAAAGGTGGATGAACCTCCAACGAGACAAGCCGGAGTCAAAGTGGAGACGGTGGAGGATCTGGTGGGAAAACTCAAAGAGGCTGGAAGAGTATAGAAGATGTGGAGGAGCAACAGTGCAGACTCATACTGACGGTCTTTCATCACTGGTGACGGAGCTCAATGTTGATCAAACTCTTGAGGCCAGTAACAAATCCAGACCCATGTAGTTGATGTAGATGCTGCTCTTCTGTGTTTATGACTCTTTTACATTCGTCTGGATGCTGAGAGACACTCATCCACCCACAGCCGTCCGTTCCAACCAATATTTCCGTGCATTGAATATAAGAGTACACTTCTGGGGACACTTTCGAATGCACTAACAAGCCATCACATTTGCTGTTAATAATTAACTCAGAATCAAATCTGCATTGACTTTATCTGTGCTGTGTCCCTGTCATTAAAAATCGGTTATCAGTGGGGTTTGATTGAGCCTTATGGTTTATTGATGTtgatttttgttgtgttgttttgcgGACAGTGTCTCTCAGCATGAAGAGAGAGTAAATCACGTTACCACAAGCGCCTCTGAATGAGTCCTGATTGTACAGTATCGTTCGATGACAATAAAAAGTCGTCTTTTTCATATGCATATCA
>TCONS_00021598
ACGATGAGCGCCCGAGTTCTGGTCGGAGTTAAACGGGTCATTGACTATGCAGTCAAGATCCGAGTCAAGCCTGACCACACTGGAGTGGTCACAGACGGTGTGAAGCACTCGATGAACCCCTTCTGTGAGATCGCAGTGGAGGAGGCTGTCAAACTCAAGGAGAAGAAGCTGATTAAGGAGGTTGTGGCCGTCAGCTGCGGCCCTCAGCAGGTCCAGGAGACAATCCGGACGGCTCTGGCCATGGGAGCAGACCGTGGCATTCATGTGGAAGTTTCCGGAAAAGACTACGAGACTCTCGGCCCTCTACAGGTCTCCAAGATTTTAGCTGCTCTCGCTAAAAAGGAAGAAGCCAGTCTGATTATTCTGGGGAAACAGGCCATAGATGATGACTGCAATCAAACTGGACAGATGACTGCAGCTCTACTGGACTGGCCACAGGGCACTTTTGCATCCGAGTTGGCTTTTGAAGCTGACAAGCTGAAGGTGGTGAGAGAAATAGATGGTGGATTGGAGACCATTAAGATCAAAATGCCCGCTGTAGTGACGGCTGATCTCCGGCTCAACACTCCCAGATACGCCACACTGCCCAACATCATGAAagcgaagaagaagaagattgcGATGGTGAAGCCAGCAGATCTGGGTGTAGACGTAAGCTCGCGGCTGGAGGTGCTAAAGGTGGATGAACCTCCAACGAGACAAGCCGGAGTCAAAGTGGAGACGGTGGAGGATCTGGTGGGAAAACTCAAAGAGGCTGGAAGAGTATAGAAGATGTGGAGGAGCAACAGTGCAGACTCATAC

Function

symbol description
etfb Predicted to enable electron transfer activity. Predicted to be located in mitochondrial matrix. Human ortholog(s) of this gene implicated in multiple acyl-CoA dehydrogenase deficiency. Orthologous to human ETFB (electron transfer flavoprotein subunit beta).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005759 mitochondrial matrix cellular_component
GO:0005739 mitochondrion cellular_component
GO:0009055 electron transfer activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1931 Predicted to enable electron transfer activity. Predicted to be located in mitochondrial matrix. Human ortholog(s) of this gene implicated in multiple acyl-CoA dehydrogenase deficiency. Orthologous to human ETFB (electron transfer flavoprotein subunit beta).

Ensembl:

ensembl_id ENSDARG00000009250

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021597 False 1388 mRNA 0.48 7 50214819 50229274
TCONS_00021598 True 801 mRNA 0.52 6 50215587 50229193

Neighbor

gene id symbol gene type direction distance location
XLOC_011071 vsig10l coding downstream 11761 50183190 ~ 50203058 (-)
XLOC_011070 lim2.5 coding downstream 33613 50166421 ~ 50181206 (-)
XLOC_011069 nek10 coding downstream 57632 50114739 ~ 50157187 (-)
XLOC_011068 CR855313.1 coding downstream 219225 49995478 ~ 49995594 (-)
XLOC_011067 znf385d coding downstream 368460 49729339 ~ 49846359 (-)
XLOC_011073 LO018246.1 coding upstream 409396 50638670 ~ 50638786 (-)
XLOC_011074 si:ch73-90p23.1 coding upstream 659844 50889118 ~ 50897887 (-)
XLOC_011075 CU855821.1 coding upstream 688639 50917913 ~ 50918908 (-)
XLOC_011076 si:dkeyp-97a10.3 coding upstream 697181 50926455 ~ 50952266 (-)
XLOC_011077 FP243388.2 coding upstream 705916 50935190 ~ 50935306 (-)
XLOC_010626 CR392024.2 misc downstream 29319644 20895112 ~ 20895175 (-)
XLOC_011064 NA non-coding downstream 977718 49236408 ~ 49237101 (-)
XLOC_011063 NA non-coding downstream 992726 49215478 ~ 49222093 (-)
XLOC_011062 NA non-coding downstream 1030335 49155860 ~ 49184484 (-)
XLOC_011061 NA non-coding downstream 1393474 48820350 ~ 48821345 (-)
XLOC_011078 FP243388.1 non-coding upstream 731972 50961246 ~ 50961362 (-)
XLOC_011080 NA non-coding upstream 849393 51078667 ~ 51080430 (-)
XLOC_011087 CABZ01074290.1 non-coding upstream 1526118 51755392 ~ 51755506 (-)

Expression


Co-expression Network