XLOC_011085 (serpinb1l4)


Basic Information

Item Value
gene id XLOC_011085
gene name serpinb1l4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 51292624 ~ 51299061 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021612
ACACTGGGAAGCTTCTGCTGATTATTCTGGCTCACTCGATTTTCTTTAGAGCTTGTGAAAATGGAGTCTCTGTCTGCAGCAAACACACAGTTTTCCCTCAACCTGTTCAAGAAGATCAGCGGAGGAAACGCATCAGGAAATGTGTTTTATTCTCCTGTCAGCATCTCCTCGGCTCTGGCCATGGTGTCGCTCGGTGCCAAAGGAAACACCGCAGATCAGATGTTTAAGGTCTTGGGCTTCAACAATCCTCCCAAACCTGGCGGAGCGACACCAACTCCTGCACAAGCAACCCAGAAGCCCAAATGGACATGTGGAGTCAAGAGTCAACATGAGCCACAAGCGCTGCAACAGCCACAGAAGTTTGAGTTACCTGCCGACCTCAAGAAATGTCCTGCTCAGCCGGTGCCTGGACAAAAAGCTGAGGAGCAAATTCACTCAAGCTTCAACAAGTTGATGAGTGAACTGAACAAACCAGGAGCCCCGTATGTGCTGAGTCTCGCCAACCGCCTCTACGGAGAGCAGACCTACCAGTTCCTTGAGAAATATCTCAGTGATGCAAAAAAATACTATGCAGCCGGACTGGAGAAGGTggactttaaaaataaatccgAAGCTTCATGTGTCAACATCAACAAATGGGTGGAGAAAAACACACAAGAGAAGATCAAGGATTTGCTGCCGTCAGGAGCCATTGATgcaatgaccagactggttttgGTGAACGCCATCTACTTCAAGGGGAATTGGGAGAAGAAATTCCCAAAAGAAGCCACAAAAGATGGACAGTTTAAGCTGAATAAGAATCAAACTAAACCAGTGAAGATGATGCACCAGAAAGCTCAATTTCCATTTGTCGTCATCCCAGAGATAAACAGTCAGATTTTGGAGCTGCCATATGTGGGGAAGAATCTCAGTATGTTGATCATCCTTCCTGATGAGATTGAAGATGCAACCACCGGCCTTCAGAAGCTTGAGAGGGCACTGACCTACGAGAAGCTCATGCAGTGGACCAAAGTGATGCGTCAACAGGAAGTACAAGTCTCTCTGCCCAAATTCAAGACGGAGCAAACCTACGACATGAAGAGTCTTCTGGTCAGCATGGGGATGGAGGATGTGTTTGACCCACAGAAGGTTAATCTAACAGGCATGTCCTCCAGCAATGACCTGGTGCTGTCCAAGGTCATTCATAAAGCCTTTGTTGAGGTCAATGAAGAAGGAACCGAAGCGGCTGCGGCCACCGGCGCCGTTGTTTCAATTCGCACTTTAGCACAGATATTTAATGCAGATCATCCGTTCCTTTTCTTCATCCGACACAATTCCACCAATACCATTCTGTTTTATGGACGCTTCTGTTCTCCCTGAAAATGATAAATACAAGTGCCTTGCTCATCTCTGTTAAATAAAGTCTCTAGTAAATGA

Function

symbol description
serpinb1l4 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in peeling skin syndrome. Orthologous to several human genes including SERPINB8 (serpin family B member 8).

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-7169 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in peeling skin syndrome. Orthologous to several human genes including SERPINB8 (serpin family B member 8).

Ensembl:

ensembl_id ENSDARG00000096888

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021612 True 1419 mRNA 0.47 8 51292624 51299061

Neighbor

gene id symbol gene type direction distance location
XLOC_011084 zgc:173729 coding downstream 4446 51281959 ~ 51288178 (-)
XLOC_011083 serpinb1l1 coding downstream 20618 51266502 ~ 51272006 (-)
XLOC_011082 serpinb14 coding downstream 37930 51244297 ~ 51254694 (-)
XLOC_011081 ago1 coding downstream 140631 51084472 ~ 51151993 (-)
XLOC_011080 NA coding downstream 212194 51078667 ~ 51080430 (-)
XLOC_011086 si:ch211-107n13.1 coding upstream 71045 51370106 ~ 51407525 (-)
XLOC_011087 CABZ01074290.1 coding upstream 456331 51755392 ~ 51755506 (-)
XLOC_011088 NA coding upstream 576310 51875371 ~ 51889734 (-)
XLOC_011089 NA coding upstream 598695 51897756 ~ 51947869 (-)
XLOC_011090 pdcl coding upstream 651449 51950510 ~ 51966846 (-)
XLOC_010626 CR392024.2 misc downstream 30397449 20895112 ~ 20895175 (-)
XLOC_011078 FP243388.1 non-coding downstream 331262 50961246 ~ 50961362 (-)
XLOC_011077 FP243388.2 non-coding downstream 357318 50935190 ~ 50935306 (-)
XLOC_011073 LO018246.1 non-coding downstream 653838 50638670 ~ 50638786 (-)
XLOC_011068 CR855313.1 non-coding downstream 1297030 49995478 ~ 49995594 (-)
XLOC_011091 NA non-coding upstream 1227791 52526852 ~ 52540136 (-)
XLOC_011093 NA non-coding upstream 1385697 52684758 ~ 52688445 (-)

Expression


Co-expression Network