XLOC_011094 (azin1a)


Basic Information

Item Value
gene id XLOC_011094
gene name azin1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 52706059 ~ 52736549 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021621
ATGAAGGGATCTCTGGATGAACTGCATTATTCTGTTGAGCTGCTGGAGGGAAGCGCAGCTCTGCGAGATGTGATCGATAAACACATCTATGATCAGACTTTTGCACAGAAAAGTGCGTTTTTTGCTGCTGATCTGGGGGTGATCGTGCAGCAGCAGGCTCGCTGGAGAAATAAAATGGACCAAATTCGGCCTTTCTACACCGTTAAGAGCAACAGCAGCCCTGTAGTTGTTGAACTGCTGGCTTCTCTCGGAACTGGCTTCATTTGTTCAAACAAgCATGAGCTGGACTTGGTTAAGGGCTTTGGCGTCTCATCTCAGGACATTATTCTGGGCGGCACGTGCAAACAGCTCTCCCATATCAAATATGCAGCCAAACACAACATCCCGCTCCTGGTTTGTGACAATGAGGCAGAGATGAGGAAGATCGCACGATGTCATCCTAAAGCAAAAGTGTTGCTGCTGTTGACGTCGGAGAGCTGCTGTGAAGTGTGTCTGAGGATGTGTTGGGGAGGGTTGGAGCAGGTGCTGCTGCTGGAGGAAGGGATTTTTGTGTCTTTTCTGGAAAGATTCAGGCAAGTGATGTGGTTTCCGGCCTAGTT
>TCONS_00021622
CCCTTTCACCCTTCATCACAACCGCCACCCTTCAGCAGCTTCAGCTAAACGCCTTCAACCGTTCATACGGTCCGCCGCTCACCGGATTACACCAATATATGGCTCAAAGTACCTCTGTTATCTCTTACATCGGTGCTCGTGTTACTTTGTAAAAATTCCGCCGAAAAAGAGTAGACGGTTTCCCTCAGATGCTCGCGATTTCTCCCGTGTGTACCTGAACTACGAGAACAGCTTAGGGACTTCTGTCTACCGTGAGCAGTTTGATTTCAACGCAGAGCCCCCTTGGGATCCTAGCTGATAGCTGGAGAGGTCATCTTCTGACCTGTTCCTTGATATCGCTAGGACCCAAGAGCTCTAAGGGCTCTCATTTATAGCTGACCGTCAGATCACGGATGAGTATGAAGGGATCTCTGGATGAACTGCATTATTCTGTTGAGCTGCTGGAGGGAAGCGCAGCTCTGCGAGATGTGATCGATAAACACATCTATGATCAGACTTTTGCACAGAAAAGTGCGTTTTTTGCTGCTGATCTGGGGGTGATCGTGCAGCAGCAGGCTCGCTGGAGAAATAAAATGGACCAAATTCGGCCTTTCTACACCGTTAAGAGCAACAGCAGCCCTGTAGTTGTTGAACTGCTGGCTTCTCTCGGAACTGGCTTCATTTGTTCAAACAAgCATGAGCTGGACTTGGTTAAGGGCTTTGGCGTCTCATCTCAGGACATTATTCTGGGCGGCACGTGCAAACAGCTCTCCCATATCAAATATGCAGCCAAACACAACATCCCGCTCCTGGTTTGTGACAATGAGGCAGAGATGAGGAAGATCGCACGATGTCATCCTAAAGCAAAAGTGTTGCTGCTGTTGACGTCGGAGAGCTGCTGTGAGAAAGAGGAGATGGCCATACCGTTCGGCTCCACACTGAAGGACTGCAGGCGTCTGCTGGAGTGTGCTGCTGGAGAACTCAATCTGCAAGTCACTGGAGTCAAATTCAACATTCCCAGCTGCTGTCAGGAAGTAGAGAAGTTCTCTCGTGCTGTTTCTGAGGCCCGCTGTGTCTTTGATATGGGGGAAGAGCTCGGCTTCGAGATGAATATCCTGGACATCGGAGGAGGTTTTGATGGAAGTGAGGAACAGTTAGACAAGgttAACCAGATGCTGAAGCCCATGCTGGACATGTATTTTCCTCGGTCGACTGGCTTGTCAATCATTGCTGAACCTGGAGCTTATTACGTTTCTTCTGCCTTCACGCTGGCCGTGAATATAATCGATAAGAAGACGGTGGCTCGGGACTGCAGTGCACAGCCACACGATGCACTGTCTGCAAACGATGAGCCAGAGTTTCTCTACCACATAAATGATGGTGTTTATGGATCTTTTGCCAGTAAACTGCTGTGTGAAGATTCAATAGCAACACCTTTGGCACACAAACATGTGAGCGCAGACGAGCCGCTGTTCTCCAGCAGTCTGTGGGGTCCCTCTGAAGATGATCTGGATCTGGTGATGGAGCGATGTCTGCTGCCCGAGCTCAGTGTTGGAGACTGGCTGCTGTTCAGAAACGCAGGAGCCAGCGCTCTGGGGTCCGCATTCAGTCACGGAGACCAACACAAACCGCCCGTCTTCTACAGCATCACTGAATACGACTGGCAAGAGATCCACAATAGTGGCGTGACTGTGGATGTGAGGATGAAGAACTTCTCTCTGGTACCTTGTTGCCTGCAACCAAACATGTCCGGGGCATCCATTTCTACTCCTGCTTAACAATAAGGCACTCGTTGTCATTATGTTGACTGATTTAAAGCACTTAGAAGCCTGAAATATGCTCAGAAGCTTTTTAAGTTGCTTCTCAGATGTTTTGCTGGGACCAGAGTTGAGGAAGAACAGCTTGATAGCTGGCACAACTGATGGATATACAGCAAATAGGTGCGACTAGCTTTAACAACTGGGCCTGTTGGCGTTTATAAATATGCTGAATTATATTTAAGtctgttttataaatgtgtgtatatatactgtacattgcaTATGATATTTGCTCCTACTAATTGAATCAATCATGTACCCCACAGGGGAAGTTATTTATTAGACCTCAAGTCTAGACATCATCAGATGCTTTTGAACAAATGTGCacgtaatttttttctttttgtattaagCAGGATGTTTAGACTGGATGCTAATAGGACATAATACAGCGGACACTTTAAGCTTTTCTCACGCACAAATACGCAACTGCAAGTGTCCGCTCTAGTTGTACATATTAGCACATGCTTGCATTGCATTTGAAAGTCTGTGTGAAGTTGCTGCAGGCTTCAGGAGATATTTCTGCATGTTGACGTATTTACAACTGAactggaatattgagtaggaggcgggGTTTTACTTTTGCGCTCCGCCTTTCATCTTTCCTTCACAGCAAGCTAATGGATGGAGGGAGgacgtggctaagcatatttcaaCCAATCAGAGTCATCAGAGAGGGACTGCTGTTCCTGAGTGGTTGCTCAGGTTTTGATTAAAGGTTaacaaa
>TCONS_00021623
CTTCAACCGTTCATACGGTCCGCCGCTCACCGGATTACACCAATATATGGCTCAAAGTACCTCTGTTATCTCTTACATCGGTGCTCGTGTTACTTTGTAAAAATTCCGCCGAAAAAGAGTAGACGGTTTCCCTCAGATGCTCGCGATTTCTCCCGTGTGTACCTGAACTACGAGAACAGCTTAGGGACTTCTGTCTACCGTGAGCAGTTTGATTTCAACGCAGAGCCCCCTTGGGATCCTAGCTGATAGCTGGAGAGGTCATCTTCTGACCTGTTCCTTGATATCGCTAGGACCCAAGAGCTCTAAGGGCTCTCATTTATAGCTGACCGTCAGATCACGGATGAGTATGAAGGGATCTCTGGATGAACTGCATTATTCTGTTGAGCTGCTGGAGGGAAGCGCAGCTCTGCGAGATGTGATCGATAAACACATCTATGATCAGACTTTTGCACAGAAAAGTGCGTTTTTTGCTGCTGATCTGGGGGTGATCGTGCAGCAGCAGGCTCGCTGGAGAAATAAAATGGACCAAATTCGGCCTTTCTACACCGTTAAGAGCAACAGCAGCCCTGTAGTTGTTGAACTGCTGGCTTCTCTCGGAACTGGCTTCATTTGTTCAAACAAgCATGAGCTGGACTTGGTTAAGGGCTTTGGCGTCTCATCTCAGGACATTATTCTGGGCGGCACGTGCAAACAGCTCTCCCATATCAAATATGCAGCCAAACACAACATCCCGCTCCTGGTTTGTGACAATGAGGCAGAGATGAGGAAGATCGCACGATGTCATCCTAAAGCAAAAGTGTTGCTGCTGTTGACGTCGGAGAGCTGCTGTGAGAAAGAGGAGATGGCCATACCGTTCGGCTCCACACTGAAGGACTGCAGGCGTCTGCTGGAGTGTGCTGCTGGAGAACTCAATCTGCAAGTCACTGGAGTCAAATTCAACATTCCCAGCTGCTGTCAGGAAGTAGAGAAGTTCTCTCGTGCTGTTTCTGAGGCCCGCTGTGTCTTTGATATGGGGGAAGAGCTCGGCTTCGAGATGAATATCCTGGACATCGGAGGAGGTTTTGATGGAAGTGAGGAACAGTTAGACAAGgttAACCAGATGCTGAAGCCCATGCTGGACATGTATTTTCCTCGGTCGACTGGCTTGTCAATCATTGCTGAACCTGGAGCTTATTACGTTTCTTCTGCCTTCACGCTGGCCGTGAATATAATCGATAAGAAGACGGTGGCTCGGGACTGCAATGCACTGTCTGCAAACGATGAGCCAGAGTTTCTCTACCACATAAATGATGGTGTTTATGGATCTTTTGCCAGTAAACTGCTGTGTGAAGATTCAATAGCAACACCTTTGGCACACAAACATGTGAGCGCAGACGAGCCGCTGTTCTCCAGCAGTCTGTGGGGTCCCTCTGAAGATGATCTGGATCTGGTGATGGAGCGATGTCTGCTGCCCGAGCTCAGTGTTGGAGACTGGCTGCTGTTCAGAAACGCAGGAGCCAGCGCTCTGGGGTCCGCATTCAGTCACGGAGACCAACACAAACCGCCCGTCTTCTACAGCATCACTGAATACGACTGGCAAGAGATCCACAATAGTGGCGTGACTGTGGATGTGAGGATGAAGAACTTCTCTCTGGTACCTTGTTGCCTGCAACCAAACATGTCCGGGGCATCCATTTCTACTCCTGCTTAACAATAAGGCACTCGTTGTCATTATGTTGACTGATTTAAAGCACTTAGAAGCCTGAAATATGCTCAGAAGCTTTTTAAGTTGCTTCTCAGATGTTTTGCTGGGACCAGAGTTGAGGAAGAACAGCTTGATAGCTGGCACAACTGATGGATATACAGCAAATAGGTGCGACTAGCTTTAACAACTGGGCCTGTTGGCGTTTATAAATATGCTGAATTATATTTAAGtctgttttataaatgtgtgtatatatactgtacattgcaTATGATATTTGCTCCTACTAATTGAATCAATCATGTACCCCACAGGGGAAGTTATTTATTAGACCTCAAGTCTAGACATCATCAGATGCTTTTGAACAAATGTGCacgtaatttttttctttttgtattaagCAGGATGTTTAGACTGGATGCTAATAGGACATAATACAGCGGACACTTTAAGCTTTTCTCACGCACAAATACGCAACTGCAAGTGTCCGCTCTAGTTGTACATATTAGCACATGCTTGCATTGCATTTGAAAGTCTGTGTGAAGTTGCTGCAGGCTTCAGGAGATATTTCTGCATGTTGACGTATTTACAACTGAactggaatattgagtag
>TCONS_00021624
tgactagtgtacagcttcaagtgacatttaaaggttaattagggtgaagttagggtaattaggcaagtcattgtataacagtggtttgttctgtagacaatccaaaacaaatattgcttaagggggctaataaaagtgctttaaaacaattaaaatctcctttttttctagccgaaataaacaagtaagactttttttcagaagaaaaaatattataggaaatactgtgaaaaattcctaaatctgttcaacatcatttgggaaatatttttaaaacaacataattcacaggagggcataATAATTGtggctttaactgtatatcatCATATTGCACAGCTCAGTACTGAAGTATTGTCTTTGTTGGTTTTTAGGCACAGAAAAGTGCGTTTTTTGCTGCTGATCTGGGGGTGATCGTGCAGCAGCAGGCTCGCTGGAGAAATAAAATGGACCAAATTCGGCCTTTCTACACCGTTAAGAGCAACAGCAGCCCTGTAGTTGTTGAACTGCTGGCTTCTCTCGGAACTGGCTTCATTTGTTCAAACAAgCATGAGCTGGACTTGGTTAAGGGCTTTGGCGTCTCATCTCAGGACATTATTCTGGGCGGCACGTGCAAACAGCTCTCCCATATCAAATATGCAGCCAAA
>TCONS_00021625
AGACACAGAAGCAGCAGCTCGTCTGTTTAGAGGACCTACTGTCTGTCCAGATATAATCAAACAGTGCaatcatttatttacaatgtttgATCCAGAATTACATTATAAAAGTGCAAAATGGACAATGTTCTGACAGGAGCTTTGTAGCCGAGATGATGAAGGCTCTTTGGGGATTCAGGTGTACCTGAACTACGAGAACAGCTTAGGGACTTCTGTCTACCGTGAGCAGTTTGATTTCAACGCAGAGCCCCCTTGGGATCCTAGCTGATAGCTGGAGAGGTCATCTTCTGACCTGTTCCTTGATATCGCTAGGACCCAAGAGCTCTAAGGGCTCTCATTTATAGCTGACCGTCAGATCACGGATGAGTATGAAGGGATCTCTGGATGAACTGCATTATTCTGTTGAGCTGCTGGAGGGAAGCGCAGCTCTGCGAGATGTGATCGATAAACACATCTATGATCAGACTTTTGCACAGAAAAGTGCGTTTTTTGCTGCTGATCTGGGGGTGATCGTGCAGCAGCAGGCTCGCTGGAGAAATAAAATGGACCAAATTCGGCCTTTCTACACCGTTAAGAGCAAC

Function

symbol description
azin1a Predicted to enable ornithine decarboxylase activator activity and ornithine decarboxylase activity. Predicted to be involved in negative regulation of protein catabolic process; positive regulation of polyamine transmembrane transport; and putrescine biosynthetic process from ornithine. Predicted to act upstream of or within polyamine biosynthetic process. Predicted to be active in cytoplasm. Is expressed in hindbrain neural plate; immature eye; nervous system; and notochord. Human ortholog(s) of this gene implicated in esophagus squamous cell carcinoma; hepatocellular carcinoma; and liver cirrhosis. Orthologous to human AZIN1 (antizyme inhibitor 1).

GO:

id name namespace
GO:0006596 polyamine biosynthetic process biological_process
GO:0033387 putrescine biosynthetic process from ornithine biological_process
GO:0042177 negative regulation of protein catabolic process biological_process
GO:1902269 positive regulation of polyamine transmembrane transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0042978 ornithine decarboxylase activator activity molecular_function
GO:0004586 ornithine decarboxylase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-20 Predicted to enable ornithine decarboxylase activator activity and ornithine decarboxylase activity. Predicted to be involved in negative regulation of protein catabolic process; positive regulation of polyamine transmembrane transport; and putrescine biosynthetic process from ornithine. Predicted to act upstream of or within polyamine biosynthetic process. Predicted to be active in cytoplasm. Is expressed in hindbrain neural plate; immature eye; nervous system; and notochord. Human ortholog(s) of this gene implicated in esophagus squamous cell carcinoma; hepatocellular carcinoma; and liver cirrhosis. Orthologous to human AZIN1 (antizyme inhibitor 1).

Ensembl:

ensembl_id ENSDARG00000052789

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021621 False 599 mRNA 0.49 5 52706059 52728159
TCONS_00021622 False 2526 mRNA 0.47 12 52708030 52733436
TCONS_00021623 False 2297 mRNA 0.47 12 52708192 52733384
TCONS_00021624 False 647 lncRNA 0.38 2 52724580 52725361
TCONS_00021625 True 581 mRNA 0.46 4 52724877 52736549

Neighbor

gene id symbol gene type direction distance location
XLOC_011093 NA coding downstream 17614 52684758 ~ 52688445 (-)
XLOC_011092 ubr5 coding downstream 59270 52542550 ~ 52646789 (-)
XLOC_011091 NA coding downstream 165923 52526852 ~ 52540136 (-)
XLOC_011090 pdcl coding downstream 739213 51950510 ~ 51966846 (-)
XLOC_011089 NA coding downstream 758190 51897756 ~ 51947869 (-)
XLOC_011095 spire1b coding upstream 50095 52786644 ~ 52821023 (-)
XLOC_011096 TPPP coding upstream 138544 52875093 ~ 52879741 (-)
XLOC_011097 zdhhc11 coding upstream 164941 52901490 ~ 52916248 (-)
XLOC_011098 brd9 coding upstream 189590 52926139 ~ 52966865 (-)
XLOC_011099 si:ch211-269k10.4 coding upstream 511282 53247831 ~ 53259409 (-)
XLOC_010626 CR392024.2 misc downstream 31810884 20895112 ~ 20895175 (-)
XLOC_011088 NA non-coding downstream 816325 51875371 ~ 51889734 (-)
XLOC_011087 CABZ01074290.1 non-coding downstream 950553 51755392 ~ 51755506 (-)
XLOC_011100 NA non-coding upstream 737909 53474458 ~ 53481394 (-)
XLOC_011101 CR759845.1 non-coding upstream 849158 53585707 ~ 53637122 (-)
XLOC_011102 NA non-coding upstream 903697 53640246 ~ 53649995 (-)
XLOC_011103 NA non-coding upstream 914353 53650902 ~ 53655539 (-)
XLOC_011104 NA non-coding upstream 949765 53686314 ~ 53699443 (-)

Expression


Co-expression Network