XLOC_011110 (LO017872.1)


Basic Information

Item Value
gene id XLOC_011110
gene name LO017872.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 54166932 ~ 54187486 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021639
CATGCAACACTCTGACTTCCTGTGAGACCTGCCTCGCCAACGTCTCGGTAAGAGTGCAAAAAAACCACTCATTTACAGGTTATTAGCTGTCGTTGATgttgaacagtgtgtgtgtgtttgtgtgtgtttgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatttctctgcagtatatgtgtgtattattattattattattgttgatgatgatctgtgtgtgtgtgtgtgtgtgtgtgtttctctgcagtatatgtgtgtattattattattattattgttgatgatgatctgtgtgtgtgtgtgtgtgtgtgtttctctgcagtaaatgtgtgtattattattattgttgatgatgatcagtgtgtgtgtttatctgcactgtttgagtgtgtattattgtgatgatgatgatgatgatgatgatgatggtgtgtgtgttgcagtgtCTGTGGTGTTTGACGAACAGCAGCTGCTCTGATTATCCAGTGTCGTATATCATTCCTCCATCATCCGTCTGTAAACTCTCTCAGGCCCGATGGGGCGTCTGCTGGGTGAACTTCGAGGCTCTGATCATCGCTATGGCTGTGGTTTTGGGTGTTTTGCTGCTGGCCGTGAccgtctgctgctgctgctgttgctgtaAACGCAGATCATCATCCAGCTTCGATCGTGACGATGAGCAGTTCGCCCGCAGGAGAGAGGAGATACGACAGAGAGCAGACGAGCGGAGAGTGGAGAGGAAAACCAAGCATGACGAAATCCGCAAGAAGTATGGACTCATCCCAGACTCCGATCATCCATACAGCAAGTTCGAGAACGAGTGA
>TCONS_00021640
GTTTCCAGAACatcaaaacatgtttctgaacaCACAGATCTCTTTATTGTCagagtgtttttattgtttgtgttttttctcttctcttcttatactttatttttaaccCCAGCATGCAACACTCTGACTTCCTGTGAGACCTGCCTCGCCAACGTCTCGtgtCTGTGGTGTTTGACGAACAGCAGCTGCTCTGATTATCCAGTGTCGTATATCATTCCTCCATCATCCGTCTGTAAACTCTCTCAGGCCCGATGGGGCGTCTGCTGGGTGAACTTCGAGGCTCTGATCATCGCTATGGCTGTGGTTTTGGGTGTTTTGCTGCTGGCCGTGAccgtctgctgctgctgctgttgctgtaAACGCAGATCATCATCCAGCTTCGATCGTGACGATGAGCAGTTCGCCCGCAGGAGAGAGGAGATACGACAGAGAGCAGACGAGCGGAGAGTGGAGAGGAAAACCAAGCATGACGAAATCCGCAAGAAGTATGGACTCATCCCAGACTCCGATCATCCATACAGCAAGTTCGAGAACGAGTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113801

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021639 False 839 mRNA 0.45 5 54166932 54187374
TCONS_00021640 True 540 mRNA 0.49 6 54166932 54187486

Neighbor

gene id symbol gene type direction distance location
XLOC_011109 cdk14 coding downstream 88270 54019456 ~ 54078662 (-)
XLOC_011107 NA coding downstream 187249 53911907 ~ 53979683 (-)
XLOC_011108 fzd1 coding downstream 247817 53917415 ~ 53919115 (-)
XLOC_011106 NA coding downstream 298940 53866294 ~ 53867992 (-)
XLOC_011105 znrf2b coding downstream 366885 53733714 ~ 53800047 (-)
XLOC_011111 NA coding upstream 104176 54291662 ~ 54296444 (-)
XLOC_011112 CABZ01111454.1 coding upstream 168356 54355842 ~ 54357200 (-)
XLOC_011113 osr2 coding upstream 214824 54402310 ~ 54405976 (-)
XLOC_011114 NA coding upstream 249490 54436976 ~ 54439156 (-)
XLOC_011115 pklr coding upstream 262921 54450407 ~ 54455573 (-)
XLOC_010626 CR392024.2 misc downstream 33271757 20895112 ~ 20895175 (-)
XLOC_011104 NA non-coding downstream 467489 53686314 ~ 53699443 (-)
XLOC_011103 NA non-coding downstream 511393 53650902 ~ 53655539 (-)
XLOC_011102 NA non-coding downstream 516937 53640246 ~ 53649995 (-)
XLOC_011118 NA non-coding upstream 338923 54526409 ~ 54532090 (-)
XLOC_011119 NA non-coding upstream 407424 54594910 ~ 54597421 (-)
XLOC_011121 NA non-coding upstream 574411 54761897 ~ 54767193 (-)

Expression


Co-expression Network