XLOC_011119


Basic Information

Item Value
gene id XLOC_011119
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 54594910 ~ 54597421 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022304
ACGGGCGGAATCTCGGGGCtgctgctgggcgctgctgtAATGGAACATTCTCCTGAGTGTCGCCTGACCTGTTGGTGATTCTGAGCTCTTTGCTCCTGATATAAATCATCACACTTTCCCCTGTGTTTAATTAAAAAGCGCTTACCTGTTGTAGAGATGGAGATTGGTGACCGGAAGTTCCGGAAGATAGAAAAGGTGGAAGGAAACTGAAGCTGTGAGGAAATAAGACATTTCACCGTCATGGACAAGAGAAGTGAAGAGACATGTTGAGTCAATGATCGCAGAAATGTCCTCTTGGAGTATCGAAGTGCTTTGTTCGGTAGATTTATCCAATATTCCGTTACTGGCCGCCGTTGAGACTCTCGCGAGTTCGCGGCTGTGAACAGCTGTTACCGTCACCGAGGATCATCGTGAATATTCCGGTCAAGAAGTGAGATTTGGAGTTTAAAAACACAAAGTGGACGTCCCTCATGCTGCGCTATTATTGCAGGAACTACAGCTTCCTCTGACATCACTTCCTCTGGTGGCAGAATTCCTCATTATTCCTCAAATTAAGACTAAAGGATCCTAGAGTTCCCTCATGAACCGtgattcactcacacacacacacacacacgcacgcacgcacgcacacacacacacacacacacactctcaaacaaacacaaactctcGCACACACACTTGTGTACACGCA

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0022402 cell cycle process biological_process
GO:0098813 nuclear chromosome segregation biological_process
GO:1902850 microtubule cytoskeleton organization involved in mitosis biological_process
GO:0022607 cellular component assembly biological_process
GO:0000819 sister chromatid segregation biological_process
GO:0090307 mitotic spindle assembly biological_process
GO:0140014 mitotic nuclear division biological_process
GO:0090068 positive regulation of cell cycle process biological_process
GO:0006996 organelle organization biological_process
GO:0051225 spindle assembly biological_process
GO:0048285 organelle fission biological_process
GO:0007051 spindle organization biological_process
GO:0007052 mitotic spindle organization biological_process
GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0070925 organelle assembly biological_process
GO:0000226 microtubule cytoskeleton organization biological_process
GO:1903047 mitotic cell cycle process biological_process
GO:2000117 negative regulation of cysteine-type endopeptidase activity biological_process
GO:0000280 nuclear division biological_process
GO:0005876 spindle microtubule cellular_component

KEGG:

id description
ko03050 Proteasome
ko03230 Viral genome structure
ko05164 Influenza A
ko05169 Epstein-Barr virus infection
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022304 True 697 lncRNA 0.47 2 54594910 54597421

Neighbor

gene id symbol gene type direction distance location
XLOC_011118 NA coding downstream 62820 54526409 ~ 54532090 (-)
XLOC_011117 clk2b coding downstream 96801 54474621 ~ 54498109 (-)
XLOC_011116 cyp11c1 coding downstream 123675 54459135 ~ 54471235 (-)
XLOC_011115 pklr coding downstream 139337 54450407 ~ 54455573 (-)
XLOC_011114 NA coding downstream 155754 54436976 ~ 54439156 (-)
XLOC_011120 spag1b coding upstream 35817 54633238 ~ 54640315 (-)
XLOC_011121 NA coding upstream 164476 54761897 ~ 54767193 (-)
XLOC_011122 khdc4 coding upstream 187843 54785264 ~ 54800202 (-)
XLOC_011123 zbtb7b coding upstream 207394 54804815 ~ 54810464 (-)
XLOC_011124 kdf1a coding upstream 293414 54890835 ~ 54919260 (-)
XLOC_010626 CR392024.2 misc downstream 33699735 20895112 ~ 20895175 (-)
XLOC_011111 NA non-coding downstream 298466 54291662 ~ 54296444 (-)
XLOC_011107 NA non-coding downstream 615227 53911907 ~ 53979683 (-)
XLOC_011106 NA non-coding downstream 726918 53866294 ~ 53867992 (-)
XLOC_011128 NA non-coding upstream 401565 54998986 ~ 54999993 (-)
XLOC_011131 NA non-coding upstream 594751 55192172 ~ 55204179 (-)

Expression


Co-expression Network