XLOC_011128


Basic Information

Item Value
gene id XLOC_011128
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 54998986 ~ 54999993 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021851
ACCAGAGAACACAAACCAACTAAGAGAGATTAATTCAACACAGCGGggagagcagagagagagaggacaacATCAAGTTTCCAGAGCCAGTCAGTTCAGCAAGAAATGAGGTGTGAGATTCAGTGGATGACTGTATGTGTAGAAGAATctaatgtgtttttttctctaaTAGAAATTGTTCCTACACTAATGAGAAAATATTTGTAGGTCATTTCCTGGGTTTTTCCGAGAGGAGCGTAGAGGGAAAAGCTGTTTTGCACCATATAAGTGGCAATGTAAACGCTTATTAATGTATATTTACCTGCTGGACAAACATGAAAAACACCAAAAGGAGAGGCAGAACTACATCTCACTATGGACTTGGAAGACGGcaattaaataaaagtacaagAAAATTTCCCCCAATCAGAGCTTTCAGATATACTTGTGAAATTGTTTCTAAAACTGGCCAACATCTGTGGTGGATGTTTGTTACGCAAGTCTTCAGGTatgttcttttttcttctttttttgatgatgatgatgatgagacgCTAATACACTCTCAGTAATTGTGCTAAAGCTGGGGCTTTTCAaagtttgtgtttgtatgtaaaGCTCCACATTAGTATCTTAAAACCAAAACCTAAAGTGTACATATTGCACTCAAAAATACAACCATGTTCTCTTTTAACCCCTTGAAACATCATGGCAgtttgtgtacctttatttttttctagggatgcaccgataccattttttttgGAACCGATCCGATCTCGATACCAAAAATTCTGAGAATTGATTAACACAGACCTGatactgtgctgtttttttttttttctaagcataatacagtttctatagctctggtgataaactcaaataataaatcttctttagtaaaaataacagacctataggcTGACTGTATATGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021851 True 918 lncRNA 0.36 2 54998986 54999993

Neighbor

gene id symbol gene type direction distance location
XLOC_011127 wdtc1 coding downstream 20005 54947768 ~ 54978981 (-)
XLOC_011126 tmem222a coding downstream 56452 54930747 ~ 54942534 (-)
XLOC_011125 tpbgl coding downstream 70173 54925437 ~ 54928813 (-)
XLOC_011124 kdf1a coding downstream 79726 54890835 ~ 54919260 (-)
XLOC_011123 zbtb7b coding downstream 188522 54804815 ~ 54810464 (-)
XLOC_011129 zgc:114181 coding upstream 3128 55003121 ~ 55028791 (-)
XLOC_011130 cmc1 coding upstream 105552 55105545 ~ 55122776 (-)
XLOC_011131 NA coding upstream 192179 55192172 ~ 55204179 (-)
XLOC_011132 iqgap3 coding upstream 208405 55208398 ~ 55259199 (-)
XLOC_010626 CR392024.2 misc downstream 34103811 20895112 ~ 20895175 (-)
XLOC_011121 NA non-coding downstream 231793 54761897 ~ 54767193 (-)
XLOC_011119 NA non-coding downstream 401565 54594910 ~ 54597421 (-)
XLOC_011118 NA non-coding downstream 466896 54526409 ~ 54532090 (-)
XLOC_011114 NA non-coding downstream 559830 54436976 ~ 54439156 (-)
XLOC_011111 NA non-coding downstream 702542 54291662 ~ 54296444 (-)

Expression


Co-expression Network