XLOC_011129 (zgc:114181)


Basic Information

Item Value
gene id XLOC_011129
gene name zgc:114181
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 55003121 ~ 55028791 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021663
TGAACTCAGCATGAGGCTCTTGCTTTAGGGATTGTGTTTGCCGGCCAGAAACTCATTTTGGCAGCTATAAGCGGTTTTTCTCCATGTGAAGGAGCCTTGGTGACCTTTATCTCGACGGGAGGTTCCCTATGATGAAAACTATTTAACAGCGGCTCCTCAATGAGCTGAAACTCCTCAGACTGAAGGTGAGTTTGCTGATGTGCTCGTGCATGCATTAATTTCTGCTTCTGATGCTAATATTTTACTGTGTTTTTCTCCACAGATGATCAGCATTAGTGTGTTTTGTCTTCTGCTGTGCACCGGAGCGTCTGCTTTCAGGTTTGAGGAGCTGACGCAGTATGTGAACACACACCAAGACGAGTTTGTGGAGacacTCAGGCAGTGGATCGCTGTGGAGAGCGACTCCAGTGATGTTACGAAGAGAGCAGATTTACACCGAATGATGGACATGACGGCAGAGAAACTGCGTCTCATTGGAGGAAAAGTGGAGATGATCGATATCGGGACGCAGACGCTGGCCAATGGCAGCTCCATCGATCTGCCTAAAGTGGTCACGGCTCAGTTTGGTGACGACCCCAGCaaacacactgtgtgtgtgtacggACACGTGGACGTCCAGCCCGCCAAGATGGAGGACGGGTGGAGCACTGAACCCTACGAGCTGACCGACCTCAACGggAATCTGTATGGCAGAGGAGCGTCTGATAATAAAGCCCCAGTCCTGGCCTGGATTCACGCGCTGGAGGTCTACAAGGCTCTAAACATCgatccTCCAGTGAATGTGAAGCTCCTGATTGAGGGTATGGAGGAGACGGGCTCCAACGGTCTGGAGCAGATGATCGTGGCCCATAAGGACTCCTTCTTCTCTGCTGTGGATTTCATCATCATCTCAGACTGTGTGTGGCTCAGCAAGCGGCCCGCGCTCACATACGGCACCAGGGGGAACTGCTACTTCTGCGCAGAGgTGGAGGGTCCCAAGAAGGATCTTCACTCTGGTGTCTATGGAGGAACAGTGGTGGAGCCCATGACGGATCTGATCGGGATCTTAGATAAGCTGATCAGCTCCAGTGGGCAGATCCTGGTTCCGGGCATCAGGGAGGCAGTGGCTCCTCTAGGGGACGAGGAGTGGAGCAGATATCAGGACATTGAGTTTGACCTGCAGAGCTTTAAACAGGACATCGGCCTCACTCAGCTCATGTACAGCAACAagGTGGATCTGCTTGCCCACCGCTGGCGTCACCCCACCGTCTCCATCCACGGCATCGAGGGCGCTTTCTCCTCGCCCGGCACCAAGACCGTCATCCCAGCCAAAGTCATTGGGAAATTCTCCATCCGCCAGGTGCCAGACATGGACCCAGCCGTGGTGGAGAAACAGGTCACAGATTATTTACACTCAGTGTTTGCGAAGCGCAAGAGTCCCAATAAACTCAACGTGACCATGGTCATCGGGGCCAAACCGTGGCTGGCGGATCCCAAACATCCGTTATTTGATGCCGGAAAAGCAGCAGTCAAGAGAGTTTTTGACGTGGAGCCTGACCTGATCCGAGAAGGAGGAACGATCCCCATCGCCAGAACCTTTCAGGACGTCACAGGAAAAAGCATCATCATGCTGCCCATCGGAGGCTTCGACGACGGCCTGCACTCCCAGAACGAGAAGATCAGCAGACGCAACTACATTGAAGGAACCAAACTCTTCATCGCGTACCTGTACGAAGTGTCCCAGATCAAGAAGTACTGAAGAGGctctgcaaacaaacacacacatgagcaGCATTATGCAAATCCCCGACTGACTAACACATTTCTCTAAACTGATGCACATCCACTGGTTAATGGAGATCATGGAGATTGCTGgtgcaaattaataaaacaagtgTTTTGCAATGTATGTGTGGTGGTTTTAtttgcatataaatatatttaattcaaatcaTCTTTAattctacagcgcttttacaatggaaattgtgtcaaagcagcttcacatagaagatcatagtgttataattatttcttcactctcctatcggtgaaatttttttccctctctgctgttgctactggcttgcatggttcatgttcggtagagctacgcatcgatgaatttgctcttcagtgtttggagtcTCTGTAATGaccttaaaccacactgaactgagctaaactgaactgaacttaaacactaaaaattgaactactctgttccaattactatgaccatttatgtgaagctgctttgacacagtctacattgtaaacaataaaataaacatttttgtactTTATCTTAAGAAAAGTTAAGAGCCTGGAGGTATTAAAcactttgcaaattcagtttgcagacatttgtaggtacagacatctattgtgtgcgttcttggtagttttttcatgtctttttaatattgttCATATCGATATGGGAATTATATCGTATCGaccgaaattaagaaatatatcgtgatataaatttttgccatatcgtccagccctactgAAAACTAAAAATCACTGGCCTCTGCTTGATTTATAGTTATGGACAAATCACTGCGGTCACGCCATCTGCGGTTCAGAGAGAGACGATCACACTATCTGTGCTTTAAATTGAGGTGCGCGTCTACTCGGTGTTTCGCGGTAGATTAAAGACGCGTGTGTTTAATGCGCTGCAGTTTTATAATCttgtttcactttattttgtGTGAATGAATTCAAATGATAATCAAAAATCGTCTCTTTTATTCATATTTGGGTAAATAATTATCATGACTTTGCATGTAGGCTATGCTATTATTCCTTTGTTTTGctgtaattgtgttttatttgctagtttaaaacataattaacagTATTAAAGTCATTACCCAGCTGTCATGACTATTAACACTCCTTTTCATATTTACAATCTATTTAGGTGTTCACTGTGTAAGTATGActgttttattggtttatttgtatttttagtaaatattttccCCCTTTTCATGTGGAATGttgctaaattaataaaaaaaatattattgtacaaatgtttattttccctacttaaatataaatatataagtaatatcaaaagcatgtaaaatataaaaatcatggaaaatacagtgtttttactGTATGGTCATATtagaaaaaatcattaaaaaataaaatctaactgTTTTCTGCCAACTCCACCAAATTATTGTTCTACGTGTCCTGATGTACCACTGTGCCCACTTTTCATAACATAttactgttgaatattttaataacagtgcgctaaaatcatgaaaaatacagtgttttttacTTTATGGTCATAttagaaaaatcataaaaaaataacatcaaattgttttctgccaACTCCACCAGATTATTGTTCT
>TCONS_00021664
CTCATTTTGGCAGCTATAAGCGGTTTTTCTCCATGTGAAGGAGCCTTGGTGACCTTTATCTCGACGGGAGGTTCCCTATGATGAAAACTATTTAACAGCGGCTCCTCAATGAGCTGAAACTCCTCAGACTGAAGATGATCAGCATTAGTGTGTTTTGTCTTCTGCTGTGCACCGGAGCGTCTGCTTTCAGGTTTGAGGAGCTGACGCAGTATGTGAACACACACCAAGACGAGTTTGTGGAGacacTCAGGCAGTGGATCGCTGTGGAGAGCGACTCCAGTGATGTTACGAAGAGAGCAGATTTACACCGAATGATGGACATGACGGCAGAGAAACTGCGTCTCATTGGAGGAAAAGTGGAGATGATCGATATCGGGACGCAGACGCTGGCCAATGGCAGCTCCATCGATCTGCCTAAAGTGGTCACGGCTCAGTTTGGTGACGACCCCAGCaaacacactgtgtgtgtgtacggACACGTGGACGTCCAGCCCGCCAAGATGGAGGACGGGTGGAGCACTGAACCCTACGAGCTGACCGACCTCAACGggAATCTGTATGGCAGAGGAGCGTCTGATAATAAAGCCCCAGTCCTGGCCTGGATTCACGCGCTGGAGGTCTACAAGGCTCTAAACATCgatccTCCAGTGAATGTGAAGCTCCTGATTGAGGGTATGGAGGAGACGGGCTCCAACGGTCTGGAGCAGATGATCGTGGCCCATAAGGACTCCTTCTTCTCTGCTGTGGATTTCATCATCATCTCAGACTGTGTGTGGCTCAGCAAGCGGCCCGCGCTCACATACGGCACCAGGGGGAACTGCTACTTCTGCGCAGAGgTGGAGGGTCCCAAGAAGGATCTTCACTCTGGTGTCTATGGAGGAACAGTGGTGGAGCCCATGACGGATCTGATCGGGATCTTAGATAAGCTGATCAGCTCCAGTGGGCAGATCCTGGTTCCGGGCATCAGGGAGGCAGTGGCTCCTCTAGGGGACGAGGAGTGGAGCAGATATCAGGACATTGAGTTTGACCTGCAGAGCTTTAAACAGGACATCGGCCTCACTCAGCTCATGTACAGCAACAagGTGGATCTGCTTGCCCACCGCTGGCGTCACCCCACCGTCTCCATCCACGGCATCGAGGGCGCTTTCTCCTCGCCCGGCACCAAGACCGTCATCCCAGCCAAAGTCATTGGGAAATTCTCCATCCGCCAGGTGCCAGACATGGACCCAGCCGTGGTGGAGAAACAGGTCACAGATTATTTACACTCAGTGTTTGCGAAGCGCAAGAGTCCCAATAAACTCAACGTGACCATGGTCATCGGGGCCAAACCGTGGCTGGCGGATCCCAAACATCCGTTATTTGATGCCGGAAAAGCAGCAGTCAAGAGAGTTTTTGACGTGGAGCCTGACCTGATCCGAGAAGGAGGAACGATCCCCATCGCCAGAACCTTTCAGGACGTCACAGGAAAAAGCATCATCATGCTGCCCATCGGAGGCTTCGACGACGGCCTGCACTCCCAGAACGAGAAGATCAGCAGACGCAACTACATTGAAGGAACCAAACTCTTCATCGCGTACCTGTACGAAGTGTCCCAGATCAAGAAGTACTGAAGAGGctctgcaaacaaacacacacatgagcaGCATTATGCAAATCCCCGACTGACTAACACATTTCTCTAAACTGATGCACATCCACTGGTTAATGGAGATCATGGAGATTGCTGgtgcaaattaataaaacaagtgTTTTGCAATGTATGTGTGGTGGTTTTAtttgcatataaatatatttaattcaaatcaTCTTTAattctacagcgcttttacaatggaaattgtgtcaaagcagcttcacatagaagatcatagtgttataattatttctt

Function

symbol description
zgc:114181 Predicted to enable dipeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in cytosol. Is expressed in eye; fourth ventricle; third ventricle; and yolk syncytial layer.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005829 cytosol cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0016805 dipeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050913-105 Predicted to enable dipeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in cytosol. Is expressed in eye; fourth ventricle; third ventricle; and yolk syncytial layer.

Ensembl:

ensembl_id ENSDARG00000069583

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021663 False 3368 mRNA 0.43 11 55003121 55028791
TCONS_00021664 True 1888 mRNA 0.51 12 55004473 55028740

Neighbor

gene id symbol gene type direction distance location
XLOC_011128 NA coding downstream 3128 54998986 ~ 54999993 (-)
XLOC_011127 wdtc1 coding downstream 24140 54947768 ~ 54978981 (-)
XLOC_011126 tmem222a coding downstream 60587 54930747 ~ 54942534 (-)
XLOC_011125 tpbgl coding downstream 74308 54925437 ~ 54928813 (-)
XLOC_011124 kdf1a coding downstream 83861 54890835 ~ 54919260 (-)
XLOC_011130 cmc1 coding upstream 76754 55105545 ~ 55122776 (-)
XLOC_011131 NA coding upstream 163381 55192172 ~ 55204179 (-)
XLOC_011132 iqgap3 coding upstream 179607 55208398 ~ 55259199 (-)
XLOC_010626 CR392024.2 misc downstream 34107946 20895112 ~ 20895175 (-)
XLOC_011121 NA non-coding downstream 235928 54761897 ~ 54767193 (-)
XLOC_011119 NA non-coding downstream 405700 54594910 ~ 54597421 (-)
XLOC_011118 NA non-coding downstream 471031 54526409 ~ 54532090 (-)
XLOC_011114 NA non-coding downstream 563965 54436976 ~ 54439156 (-)

Expression


Co-expression Network