CI01000110_02890041_02906679


Basic Information

Item Value
gene id CI01000110_02890041_02906679
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 2889879 ~ 2908219 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000110_02890041_02906679.mRNA
ACACACCATATCAGTCCAGCACTGACAGCGTGAAAAAAAGTCCAGCTTTGATGACATGAGAGCTAACAGAGATGTTTTGATTGGAGTGAAATTAAGATAAATAGGAAGGGTGTATTTGTGCGAGTGTGCATGTGTGGGTTTCCAATTTTACAACAGTATTTACACACTAGTAATCTTCAGGGACTTTGCGCAAGAGTTGCATCAAGTCGAAAAATTCAGGCCACTTTCAATGAATAGTGTTAAAATTGTGTCTCAATAAAATATCAGAGTAAAATATTAAATAATGCATGCTAGATAAACTATCACAAAAACAGAATTAACATGATAAGTAGGTAATTTGGTCACACTTTAGATTAGAGTCCAATTCTCACTATTAGCTAAGAATTAACTATGACTTTTCCCTCAATAAACTCCTAATGACTGCTTATTAATAGTTAGTAAGGTAGTTGTTAAGTTTAGGTATTGGGTAGGATTAAGGGATGTAGAATATGATCATACAGATTAATGGCTGTTTATTAGTACTTATAAAGCACATATTAATTATAAGTACTAATAAACAGCCAATATAATATGCATGCTAATGAGCAACTAGTTAATAGTGAGAACTGGACCATAAACTAAAGTGTTACCACTATTTTTTTTTTACTTTAAATGTCCCTAAAATGGTTCTGGCCTGTAAATAAAATCATAGAAATAAATAAAAGTATAGAATCATTGGTAACACTTTAGTATAGGGAACATGTATTATCTATTAACTATGACTTTTCCCTCAATAAACTCATAATTTACTGGTTATTATTAGTTAGTAAGCTAGTTGTCAAGTTTAGGTATTGGGTAGGATTAAGAATGTAGAATAATGGCATTAATATGTGCTTAATAATTAGTAATAAACAACCAATATTCTAGTAATATGCATGCTGCATAAATAGACATACATAAATCCTGTAGCAGATCTAGGCAGGTGGAGCTGGGGGAGGTGGAGGGTTTTAGAGCAACTCTGATTGCGGCTGCAGGACTAGCTTATAGCAATTAATGAACCAGACTATTTAAATGTTGAGCAAGCAATCTCATTGGCTGCAGGATCAGCAGAGGCCAATCAGCTTGTGCCATGTGGTGATGATGTGATCTATCAGCCTGCACCCTCTAGAGTTTCATGACTGAACTAGACATTTTACCAAAACATAATATTTGTCCTACATTTTGAGTTCAAATAAACAAACAAACAAAAATAATTTTTTTAATTTATATACATTGTATTTAATATGTTTGTATATTTCACATTAACATTACATAAAAAGTGAATACAAAATAAACAGGTCATTTCATACTTTGTATGAACCTCTGAAGTGGATGTTCAATGTTTTCTGAGAATGAACACTTCCTTACACTATATTAAAAAATAAACTATTACATTTCAAACCCTATTATGTACCATTTTTATGAAATCTGCTTTATTAATTTTTTTTTATAATAATTAGGCGCATACTTACAAGATTACACAAATTATCAGTCTCCAAAGAGGTCATGATTCGGCCACAATATGAGTGCGTTCATTTATTTCTTCATTTCCTCTCAGAACTTAAAACATTATTCTGACATTAACATATCATGTCTGCGAGGCAGTGCAAAGGTCAAGAAATGGGTTTGCCAAGGCCCCCTAGTGGGCACTCTTGTTGCAAACTACTGGTGTAAACTATCTATTTCTGTTGTTAAGATTCTCTTAAAGATCAATTACTGTCTTGGTGGAGCAGCGGTTTATAATGGAACAGAAACTTTCCCTTGTTCATCTATACAGGGTCAGACAGAAGCGCCTGATGTATTTGCTGCTTGGCTGCTCTCAGAGATTGCTATCAGCCAAGACTCGTCCGTGGAGAGATGCAATACAAATGTAATGCAAGATGAACCAATCAATAGAGGTGTAATGTTGAAGCCAGGACCTCGGTTTGTAGATGTGTTTTCAATAATAAGGCCGAAGCGCAAAGCCAATCACCATTTGCCTGCAATCGCATTTTCAGAGGCATTTCAGGCCAGCAAGTTTATCAAAGGCAAGGTGGTGTTAAGTTGCACAGGGAATATTCTCATAACACACGATACACCACAGATGATTCTGCACAGCTCTCTGATGCTAATTACAAACTGCCTGCGTTGTGTAGCGTTGTGTAGCACCTTTGATATTAGCTTTAGAGAGAGCAGCCCAGCTCTCACCTCACTAACTGCAGCTGGGACAAACCTCTGCCCCACACCCGGAGCCTGGAGCCTTTGGCTCTCAACCCACACCCACTACAGTGGGAACGGCAGCGCAGCAGAAACGCTTCCAGCACCTCCAGTCCCAGATTCCCACTGTGGGAACACGGCTGTAGGCCATGCTTTCTCTCTGTCTCCTTAATGAGGCCCCATTTGCACCTCCTGTTCCCAATCCCAAGCTATCAGGACCACCACCACAGATAAAAATGTAGATGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000110_02890041_02906679.mRNA False 2467 mRNA 0.37 7 2889960 2908219

Neighbor

gene id symbol gene type direction distance location
CI01000110_02794268_02794597 NA coding downstream 95363 2794182 ~ 2794597 (-)
CI01000110_01988105_01990600 SLITRK4 coding downstream 898219 1986589 ~ 1991741 (-)
CI01000110_01864492_01865547 NA coding downstream 1024413 1864478 ~ 1865547 (-)
CI01000110_01436253_01450759 NA coding downstream 1439201 1436205 ~ 1450759 (-)
CI01000110_01432049_01434499 RAB33A coding downstream 1455461 1431705 ~ 1434499 (-)
CI01000110_03015589_03024689 IDS coding upstream 107031 3015250 ~ 3025361 (-)
CI01000110_03084686_03087106 NA coding upstream 176220 3084439 ~ 3087106 (-)
CI01000110_03095980_03103572 RNF20 coding upstream 187237 3095456 ~ 3103572 (-)
CI01000110_03122088_03123095 NA coding upstream 213444 3121663 ~ 3123095 (-)
CI01000110_03138199_03142034 NA coding upstream 229061 3137280 ~ 3142354 (-)
G324755 NA non-coding downstream 177717 2664187 ~ 2712243 (-)
G324142 NA non-coding downstream 411766 2477987 ~ 2478194 (-)
G324118 NA non-coding downstream 437321 2452275 ~ 2452639 (-)
G324103 NA non-coding downstream 459047 2430685 ~ 2430913 (-)
G324034 NA non-coding downstream 545751 2343876 ~ 2344209 (-)
G324909 NA non-coding upstream 45013 2953232 ~ 2959837 (-)
G324936 NA non-coding upstream 105454 3013673 ~ 3120099 (-)
G324960 NA non-coding upstream 119038 3027257 ~ 3033466 (-)
G324939 NA non-coding upstream 122795 3031014 ~ 3032019 (-)
G325013 NA non-coding upstream 217189 3125408 ~ 3125846 (-)
G323133 NA other downstream 1653111 1205829 ~ 1236849 (-)
G322580 NA other downstream 2784141 103265 ~ 105819 (-)

Expression


Co-expression Network