CI01000110_03015589_03024689 (IDS)


Basic Information

Item Value
gene id CI01000110_03015589_03024689
gene name IDS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 3015250 ~ 3025361 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000110_03015589_03024689.mRNA
AGACTCACACAATATCATATGTTCACTCCATCACGTTATACCAAGCATCCAATAATCAAAAGCAAATCAAGGCCGTAATCGCATCTTTTTTTTTATTTACTCTTTTTTTCCCCAAAAAATTTCATGAGTTCAAAGGTGCCCATAATTAAAGCCCCATGAAGAACATGCAATAAATTGTCTATCTATATCAGTGATCTTATTGTATATCCAGGTACACAAGTGACATATGGTCAAAAGAACGCATAACAAAAGGTTGCAAAAATCTTTATTAGGCCACTGATTTTGGACATTTCTTTCATTTCCATAGGGATGACCCAGTTTTAAATCTTCATAAGGTGAGGTAACAGAAGAACAAAGCAATACATCATTGAAATGGCAGCTGCATGTATTTAACAATATTTTATTTAGGCTATTTATATTTTCTGTTATATGAAATCAGGTGTTCTGGGATGCTTGGTTTACTGTGCAATTGAAAAATGAAACCTTGTGGTGTCAGTATGTCTTTCTTTAATATATATATATATATATATAGGCTATAAACGGAAACCATAAAAAGACAATATAGTTTCAGAAACATTTTCAGCATTTGTCACCAACTGGAAAACCAGAGAATGTACAGGTAAGCTAACAAATGTATCATGACATCAGTAGCCTATAGGTTACAAAAATATTATGTCCACAGACACATTTATTAGTTGTTACATCGCAAGACCAACTTTAGGTTGCTACTCTGATCCAGTGGTCAAATCACCAAACATTGATCAGCTTGCATCTGTGAGCACAGTGTTTTATAACGCCTATGCACAGCAAGCTGTTTGTGGACCTAGTAGGGTGTCTTTCCTAACAAGTCGAAGACCAGACACCACAAAGCTGTATGATTTCAACTCATATTGGAGGGTTCATGCAGGAAACTACACTACACTCCCTCAATACTTCAAGTCTAATGGATACAGCACCTTTTCAGTGGGCAAAGTCTTTCATCCTGGCATTGCCTCCAACCACTCGGATGATTACCCGTACAGCTGGTCTGTACCGCCGTATCATCCACCCTCTTTTAAATATGAAAAGAGGAAGGAGTACCTAAAGCTCTATCCTATTGAGAGTATGACGCTGGCTCCAGACCCAGATGTTCCTAAGAAACTTCCTGATGTGGCCTACAACCCCTGGACTGACATTCGCAAGAGGGAAGATGTTCAGGCGTTAAATCTGAGCTTTCCTTATGGCCCCATTCCTAAAGACTTTCAGCTGCAGATCCGACAGCACTACTTTGCCTCAGTGTCATATGTGGATGCTCAGGTGGGAAAAATTCTGCAAGCCCTTGATGATTTCGGCCTCGCCAAGAACACTATAGTGGTGTTTAGCTCCGATCACGGTTGGTCATTAGGAGAACATGGTGAGTGGGCCAAATACAGCAACTTTGATGTGGCCACCCGAGTGCCATTGATCGTGTACAAGCCAGGTGTGACCTCACCTTTCTCTCGGCCTGGGGAGAAGACGTTCCCCTTCATCGACGTGTTTCAGGGCACACGGGAGCAGTTTGGCAAAGGTCAAGGAGTTGAGAGTGTGGTGGAGCTGGTGGATGTTTTCCCCACGCTGTCGAACCTGGCTGGACTGCGTCCTCTGCGGCGCTGCCCCTTGCCATCCTTTAAGATTGAGCTGTGCACCGAGGGCTCAAGCCTGGCCTATCTCATCCGCAACCCAGAAAGAGACCTTAACAGAGAAGCCTACTCATTCAGCCAGTACCCTCGGCCCTCAGACTCCATCCAGGAGAACTCTGACCTGCCCGACCTCGCCGATATCCGCATTATGGGCTACTCGATTCGCTCCACTGACTACCGGTACACCTTATGGGTGGGCTTTGACCCACTCCACTGTCAGCCTAACATGACAGACATCCACGCGGGAGAAATGTACCTCCTGGCTGAAGACCCGGGAGAGGACAATAACGTGTTTGATGAATTTGACCACGCCACAGTATTGCATAAGCTTGGCATGCTTCCGTCATGGACAGAGAGTTTAAAGCATCATTTACTGTATCTCAGCAATGGTTTGAAATCAAAAGGGATTATGTGATTCTAGTTTGTCATTAAAGGGAAAATTTATTACAAAACCTGTCTGGACATTCATCAAAAACTGAAAGGCAGAATTAAGAAGTTACATTTTGCTTAAAGAAAATGAAGCCTATTTTAGGGAAATGCTTTCTGACATACTGTGATAAGTACTCCTCTCACCAATTCTCATTATCGTAATGCTAATAACTTCTCATTCTCATCACTGTAATGTGAAAATATAATTTATTATAAAAATGGTAAAGCAATTTGTTACTGCTATTAATTTATTCTGATTTAAATGAAAATGTATTGCAGTAAATTGTATTTTGCACTAAAAAAAATGTGCTCAAAAAATAATAAA

Function

symbol description
ids Enables iduronate-2-sulfatase activity. Acts upstream of or within several processes, including cell surface receptor signaling pathway; heart trabecula formation; and skeletal system development. Located in cytoplasm. Is expressed in several structures, including brain; digestive system; head; pectoral fin bud; and pleuroperitoneal region. Used to study mucopolysaccharidosis II. Human ortholog(s) of this gene implicated in mucopolysaccharidosis II. Orthologous to human IDS (iduronate 2-sulfatase).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01136 IDS; iduronate 2-sulfatase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000110_03015589_03024689.mRNA True 2412 mRNA 0.41 8 3015250 3025361

Neighbor

gene id symbol gene type direction distance location
CI01000110_02890041_02906679 NA coding downstream 107031 2889879 ~ 2908219 (-)
CI01000110_02794268_02794597 NA coding downstream 220653 2794182 ~ 2794597 (-)
CI01000110_01988105_01990600 SLITRK4 coding downstream 1023509 1986589 ~ 1991741 (-)
CI01000110_01864492_01865547 NA coding downstream 1149703 1864478 ~ 1865547 (-)
CI01000110_01436253_01450759 NA coding downstream 1564491 1436205 ~ 1450759 (-)
CI01000110_03084686_03087106 NA coding upstream 59078 3084439 ~ 3087106 (-)
CI01000110_03095980_03103572 RNF20 coding upstream 70095 3095456 ~ 3103572 (-)
CI01000110_03122088_03123095 NA coding upstream 96302 3121663 ~ 3123095 (-)
CI01000110_03138199_03142034 NA coding upstream 111919 3137280 ~ 3142354 (-)
CI01000110_03152754_03157924 MAEA, MAEA.S coding upstream 127104 3152465 ~ 3157924 (-)
G324909 NA non-coding downstream 55413 2953232 ~ 2959837 (-)
G324919 NA non-coding downstream 119162 2894481 ~ 2896088 (-)
G324755 NA non-coding downstream 303007 2664187 ~ 2712243 (-)
G324142 NA non-coding downstream 537056 2477987 ~ 2478194 (-)
G324960 NA non-coding upstream 1896 3027257 ~ 3033466 (-)
G324939 NA non-coding upstream 5653 3031014 ~ 3032019 (-)
G325013 NA non-coding upstream 100047 3125408 ~ 3125846 (-)
G325019 NA non-coding upstream 118155 3143516 ~ 3143879 (-)
G325020 NA non-coding upstream 118571 3143932 ~ 3144335 (-)
G323133 NA other downstream 1778401 1205829 ~ 1236849 (-)
G322580 NA other downstream 2909431 103265 ~ 105819 (-)
G324936 NA other upstream 90097 3013673 ~ 3120099 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location