CI01000110_03138199_03142034


Basic Information

Item Value
gene id CI01000110_03138199_03142034
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 3137280 ~ 3142354 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000110_03138199_03142034.mRNA
ATTATCGTTTGCTAGGACTAAGTGCGTTCAAGGCAAGAGTTAACTGCGAGAAAATATCAGTGAACAGTGAGTGAATTTCTGTCTGAACGGGTACGACAATTCGGTTGAATCATAGTTCTCATAAAAGACCAGAAATTAAGTTTGACACAACCAAACAGCTCACGAGAGATCTGTAAACACTCTCAGAACTTTTGCAGAAAAGTCTTAGTACTTTGTTGAATCCGAATAGTTCTCATAAACGATCAGAGATGTCTTTTGACAAGAACACATCTTCTTCATCATCATCATCATCATCATCATCATTATCATCATCATCCAAAATGGAGGAAATCACCTGTAGCGTAGACAGTCCTTCTCCGGAATCATTTGAGGAAGATTTCACCTCTAAATTAAAATGGTTTTTGAAGCGCGAACTGCTGCTCAACAAAATCTCGGACCTTGAGAACAGAGCCCGAGAGCGCCAGGAGGAGTGTAAATCACTGCTGGAGCGATTCACCAATATACAGAAATCGCTAGAATGGGAAATAGAGAAAGTGCAAAACTCTATGGTCAGCATGGAGCAGCTGGAGAACTTGCAGAAGACTTTTGACGAGTTCCAGGCTGAAATGAAGCACAACGTGAGCCGCTTGCAGGACAACTTTGAGAAAATGCGAGGTGTCGCTGCTAAACAGCGTGCGAACATGAAGGCACAAGATAAAAGGAAAGATGATCTGGATCCCAAAGTGGTTCAAAGCATCCAGTCTCTGAAGTCCTGTCCCACAGTACCAGAAATGAAGGCGAATTCAAACGCTGTATCAGAGTATTCATCAAACCTGATCAGTGTGTTGAATAACATCGCCAAATCAAACACCTGCAGTCCAGCCACGAGCAGGGCCTTAACAATAGCAACAGCGACCATTGGAAACCTCAACAAGGCTTTTCAAGATCACTGCAAAGAGGTAAAGGCTCTCAAGGCGAGTCCACAGAAACAGAGAAAGGTGGCTGAAGAAGTGGACAGAGACATCTACGGTTCATCTTTGCAGGAATATGGCTCTATAGTACAGCAGCAGATGCCAAAATTGCTTGCCAATCCTGAGAGGCCAAAGACTGATGCTGCAAGCAAGCCGTTTACTCAGGTCAGGAAGCCTGTGCAGGGGGCAAAAAATAAAGTGTTGCCGCTGGAAAGACCAGTAACAGCATTACAGAAGACTCCAAAAGACCTCCAGAGTCCATCTGCTGATGACATGTTTCCTCCGGCCCCTGTCAGATCTTTTGCTCTCTCCAACATTACACGATCTGTAGAGAAGACAAAAGTTAGCATGGAGTCAAAGGAAGAAACAAGAAATGTCACATCATTTAACAAGATGGCTCAAGAAGAACCGCAGAGCCCGGCTCCTCTTAGCATCCATCATCCTTCCCCTGTCAAATCTTTTGATCTCCCTCAGATCTCGCAGTCTGTAGAGGAGACAAAAGTTTATGTAGGGTCAATGTTGAGAACAGGGACATCATTTGAAGGGATGGCTCAGAAAGACCTCCAGAGTCCATCTACTCATAACCTCCATCGTCCTTCCCCTGTCAAATCTTTTGATCTCCCACAGATCCCGCAGTCTGTAGAGGATACAAAAGTTTATGTAGGGTCAATGTTGAGAACAGGGACATCATTTGAAGGGATGGCTCAGAAAGACCTCCAGAGTCCATCTACTCATAACCTCCATCGTCCTTCCCCTGTCAAATCTTTTGATCTCCCACAGATCCCGCAGTCTGTAGAGGATACAAAAGTTTATGTAGGGTCAATGTTGAGAACAGGGACATCATTTGAAGGGATGGCTCAGAAAGACCTCCAGAGTCCATCTACTCGTAACCTCCATCGTCCTTCCCCTGTCAAATCTTTTGATCTCCCACAGATCCCGCAGTCTGTAGAGGATACAAAAGTTTATGTAGGGTCAATGTTGAGAACAGGGACATCATTTGAAGGGATGGCTCAGAAAGACCTCCAGAGTCCATCTACTCGTAACCTCCATCGTCCTTCCCCTGTCAAATCTTTTGATCTCCCACAGATCCCGCAGTCTGTAGAGGATACAAAAGTTTATGTAGGGTCAATGTTGAGAACAGGGACATCATTTGAAGGGATGGCTCAGAAAGACCTCCAGAGTCCATCTACTCGTAACCTCCATCGTCCTTCCCCTGTCAAATCTTTTGATCTCCCTCAGATCCCGCAGTCTGTAGAGGAGACAAAAGTTTATGTAGGGTCATTGTTGATAAGAGGGACATCATTTGAAGAGATGGCTCAGAAAGACCTTCTGCAGTCTGTAGAGGAGACAAAAGTTGATGTGGTGCCAGTGAAAGATCTCCAGAGTCCGTCTCCTGTCCACAGCCATCCTTCCTCAATCATGAAACGGCCCCAAATTCAGACTGAAGTAAAGCCATCACTTCAGAAACCTGACAAGCCAGAGACTAACAAATATGTTTCAGGAGTCTTAGGTAACAGTGAAGAGGATGATGACAAACTGCTTCATGAAAGGATGAAAGGTCAAACGTTCGTAATTGACATCGAAGCTCAAGAAAGCAACCTCAAACATCTGGATCGAGCTTTTCAAAACAACAACATCTCCTCTGAAATGTACAACCTGTGCAGAGGAAACATCAATCAAACACTTCAAAGTGTTGATCTGCGACTTGGATGTCTTTTACGGAGATACATCAAACACGTCCAGTTGAAGCAATTAAGGAAGACGCTCGATGAAAATTTCAAGCTGACCAAAAATTTAAAGGATGGACTGGCATTCAAAAAAGTTCATTCTCAGCTCTGTAAATTCGACCATTTCCAAAAGAGTGTGAGAAAAGTCTGGGACGCCAAGCAAGCTTCCACGGACGAGACACGCAGATGGTGCATCGCACGGACAGCCCATTTATACCAGCAGATGAATTCGATCCATGGCCTACATCTGACAGGCATATCATGTGTCCAGAGGCACGTACCAGTGTCTCTGCTGACTGTGACACCTGTGAGGTTTAGCACACATCTATGCCCATCTCCTCCTCAGCGGCCGCAAACTGCTCCCAGCAAAGCCAGTCCAGCTCGTCTTCCTCGAAACAACCTGAGAGTGCTTCACAGCACAGATGCGACCAGGAATATATCAGGCAGTTTCTTGAAGATCAGTCACGTCCGTTATTGATGGCCAACATGAACCTGTGTATGTGAAGGATAATGGCCAGTTACTCGCATCTGGAACATCTCATGTGTAAAAGAACCCAAGAGCAGTGTGGGAAGGAGGACGAGGCTGAGGGCCGTAAGACGAGGCCGGTGGCATGATTGCTAATGAGCATCACCTGCGCGCCGCACCGGTCTCGTATCTTACGGAGGAGCTCGGAAGCATAAAAGGGGGAACGACGACAGTGAAGGACGAGAGAGGACCAGTTCCCGCCTCCTTCTTCCCTAATCTACTAACCTTGCTACATTAGTGGTGAAACCCGGGAGGAAGGAGGGACACGCTGTCGGAGAGTCCTCACTGCCGAGAGGGAATGCAGTGCTGAGGAGGTCGAGCAGCACGAAGGAGGGGTGACCGTCAGTGGCTGCCCGCTGGTGTCCGCCAGGCCCACTGCCGTCCGCCATGATGGGGAGGAGCAGGCAGACCGATGGAACGGGGAGCTTGCTGCCGGGCCACCATAGCGGAGGAGCCATTGTCGGCCCCATGGAGGTGGAGGAGTGTCGGGCCGTCCTCCATCGCATGGCACTGCAAGCGAGAGCCTCTCGGCTGGTTGAGGACCGAGAGCCAGTGTGTCCGGGAACTGGACCAAGAATGTTTTCCTCTCTCCCCTCTGTACCTCCTCATGCTTCCGTCTCCTTTTCTCTCGCCTCGTCTGTCCTTACCCCCAGGTGCTACTACACACATGCTATCAGCACCTTTAACCTGAGGGGGGGTGGGGGTGGGGTAGAGCAAGTCCACCGTGGGCTTGGCAACACTGCTTACCTCTTAACCCACTCTTAAACCTACCCATACCACCAACCGATCCCTATCCCTTACCCGTATTCCATTTTTATAAAATATATATATATATATAAAATTAATTTACAAAAATCAGATGTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000110_03138199_03142034.mRNA True 4074 mRNA 0.47 5 3137280 3142354

Neighbor

gene id symbol gene type direction distance location
CI01000110_03122088_03123095 NA coding downstream 14185 3121663 ~ 3123095 (-)
CI01000110_03095980_03103572 RNF20 coding downstream 33708 3095456 ~ 3103572 (-)
CI01000110_03084686_03087106 NA coding downstream 50174 3084439 ~ 3087106 (-)
CI01000110_03015589_03024689 IDS coding downstream 111919 3015250 ~ 3025361 (-)
CI01000110_02890041_02906679 NA coding downstream 229061 2889879 ~ 2908219 (-)
CI01000110_03152754_03157924 MAEA, MAEA.S coding upstream 10111 3152465 ~ 3157924 (-)
CI01000110_03196898_03206968 PPP2R2C coding upstream 53828 3196182 ~ 3206968 (-)
CI01000110_03220300_03222003 NA coding upstream 77466 3219820 ~ 3222003 (-)
CI01000110_03281209_03283417 EGR1 coding upstream 137408 3279762 ~ 3283849 (-)
CI01000110_03438821_03442595 NA coding upstream 296419 3438773 ~ 3442661 (-)
G325013 NA non-coding downstream 11434 3125408 ~ 3125846 (-)
G324936 NA non-coding downstream 17181 3013673 ~ 3120099 (-)
G324960 NA non-coding downstream 103814 3027257 ~ 3033466 (-)
G324939 NA non-coding downstream 105261 3031014 ~ 3032019 (-)
G324909 NA non-coding downstream 177443 2953232 ~ 2959837 (-)
G325019 NA non-coding upstream 1162 3143516 ~ 3143879 (-)
G325020 NA non-coding upstream 1578 3143932 ~ 3144335 (-)
G324978 NA non-coding upstream 5166 3147520 ~ 3200136 (-)
G325046 NA non-coding upstream 116354 3258708 ~ 3258939 (-)
G325047 NA non-coding upstream 116634 3258988 ~ 3259209 (-)
G323133 NA other downstream 1900431 1205829 ~ 1236849 (-)
G322580 NA other downstream 3031461 103265 ~ 105819 (-)

Expression


Co-expression Network