CI01000110_03802977_03807616 (FUT11)



Basic Information


Item Value
gene id CI01000110_03802977_03807616
gene name FUT11
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 3802191 ~ 3807616 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000110_03802977_03807616.mRNA
ATGGCGCTCTGCCTGTGGTTTATTTTGGTGGTCCCGCTGTGCTGCTGGGGACAGGGACCAGTGGACACAGGGGACGGTGGTGTTTTCCAGCCCCAGAGTGCCCTCACTGACATGGAGTTTGCCACTGTGAGCACCTACCGCGGCCCCGGAAACACTGACCCTCGGCCCAATAAAGACCTTCCCATCCTTCTGTGGTGGAGCTCCAATCTCTTCCCACACTTCCCAGGAGATACAGAGCGTGTGGACTGTGCCCGCTCGTCCTGCCTAGTCACAAGCAACCGTAAAGTTCAACTGTATCGTCGCACGGCATCCATTATTTTCTACGGCACAGACTTCCGTGCCTATGAGGCTCCACTGCCTCGTATGCCCCATCAAACCTGGGCACTTTTCCACGAAGAGTCTCCGATGAATAACTACCTTCTGTCTCACAGTGTTGGGATCAGGCTGTTTAACTACACAGCCACCTTCAGGAGGGAGTCGGACTATCCCTTAACGCTGCAGTGGTTGCCCTCGCTGGATTATCTTCTGACACCGACGGCAGTCCCTTTGCAGGAGAAGAACCGCTGGCGACGGGCCGGTCTGGCCCCTGTGCTCTACATGCAGTCCCACTGTGATGTGCCTTCAGACCGGGACCGATATGTTCAAGAGCTGATGAAGTATATAGAGATTGACTCGTATGGGAAGTGCCTTAACAACAGACCCCTGCCTGAACATCTGGAGGACACCAGCACAGCCACTGGTGAGGACAGGCGCTTCATGAACTTCGTCGGTCGTTATAAGTTCCACCTGGCCCTGGAGAACGGCCTGTGCCCGGACTACATGACTGAGAAGCTGTGGCGGCCCATGCACCAGGGTTGTGTGCCCATTTACAGGGGCTCGTCATCAGTGGCCGACTGGCTGCCAAACAATCATTCCGTTATCCTCGTTGACGATTTTCCCTCTCCACGAGAGCTGGCAGAGTTCATAAAGGCTCTGGATCAAGATGACGCGGAGTACTCACGTTTTTTGGAGTACAAAACGCCCAGTCGGATCACTAACCTGCGTCTGCTGGAGGGGCTTGAGAACAGAGAGTGGGGAGTCAATGACATGAGTAAACCAAACTACTTGAACGGGTTTGAGTGCTTTGTGTGCGACCGAGAGAACGAGCGTCTGGCAGCAGTGAAAGCGCACAGGAAGAACCCAAAACTAAACCTGCCTCCACAACCAAAGATGGCCAACAGTTCACACATGGGCTGCCCACTGCCCAGTCCTGGATACGGGCCTGTGGAAAGCATTGACCCAAATGACAGCTGGCTCCAGATGTGGCCGCAGGACTACTGGCAGAGTCTGGATCAGGCAGAGGGTTTGGAGTCGCTCATCAGACACAACGTGTCAGAGCCGTCGTTACTGTGGCAGCATATACAGAGCATCGCTGTGAGGAGAGCCAGAGGCCAATGAGAGGAGCTCAGGACTCACCATCCACCTGAGGTGACATCTCAGATCAAAACTTCCTCCGACAGCTCAAGACTCCAAATATTTTTGGCAACAATTGTATTTTGGCAATCCACCTACGGCGGATGAGCCGTTCTTGAAGTTTGTGCACACAGGAATCATTTGTATTATTTCTAACTAAATGGAAACAATCACAATCTCATTACATGTTGATATTTCCCTTCAATATTATGTATTATGAATATGCATTCATAGTGAATGTTCTTCATCTATATGTTACTCTGAGGGCTTCAGCTGATGTTGAGCATCTCATAATCACTCAGGCTTGCTTGCAGCTTGTCACAGATCTCATGGAAGCATATCATTGCAGATGAACATTTATTTGCATGATTGTTTTTAAGAGAATCTCACAAAACAGGTCAGGTTGTACAATATAGCATTTTTTCACATTACCGTATTGGAAATTTGGGGTGGATTGGGGGGAGGCTTTTTATTGTCAGAAGTCCTAAATAGGGTTATTTTCTAGAAGCAAAATATAACTTTTCATTTTAGGATGATATATGACCTGCACTTGTTCTTGAATGATTCAAGAGATTCTCCTACACGAGTTGAATAGAAGAATCTCATGAATTATTCAAAAACAAATGCAGGTCATATATCAGCCAAAAATTAAAAGAAAAGCTAAGGCTAAGACCTGTTGTTTATATTGTGTTTGCATACCTCAGTGTTTTTTATGCAATATTTATATATATTTATATTTTCTATTGCACAGTCTTGTAACAAATCAATAAA

Function


symbol description
fut11 Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi cisterna membrane and Golgi membrane. Predicted to be integral component of membrane. Orthologous to human FUT11 (fucosyltransferase 11).

GO:

id name namespace
GO:0008921 lipopolysaccharide-1,6-galactosyltransferase activity molecular_function

KEGG:

id description
K11257 FUT11; galactoside 3-L-fucosyltransferase 11

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000110_03802977_03807616.mRNA True 2223 mRNA 0.48 3 3802191 3807616
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Neighbor


gene id symbol gene type direction distance location
CI01000110_03766267_03768570 CETN1.S, CETN2, XCEN, CETN1 coding downstream 33621 3766237 ~ 3768570 (-)
CI01000110_03746371_03748513 NA coding downstream 53678 3746189 ~ 3748513 (-)
CI01000110_03669983_03685620 SSRP1A, SSRP1, SSRP1B coding downstream 116571 3669094 ~ 3685620 (-)
CI01000110_03648076_03657222 P2RX3A coding downstream 144818 3648058 ~ 3657373 (-)
CI01000110_03633137_03638227 RAD9A coding downstream 163964 3633093 ~ 3638227 (-)
CI01000110_03830400_03831464 PLP1, PLP1A coding upstream 22784 3830400 ~ 3831464 (-)
CI01000110_03841903_03845565 NA coding upstream 34126 3841742 ~ 3845565 (-)
CI01000110_03874133_03952548 NLGN3, NLGN3A coding upstream 66517 3874133 ~ 3952548 (-)
CI01000110_04000887_04042455 NLGN3 coding upstream 192936 4000552 ~ 4042796 (-)
G325216 NA non-coding downstream 9151 3792805 ~ 3793040 (-)
G325215 NA non-coding downstream 12606 3785296 ~ 3789585 (-)
G325162 NA non-coding downstream 37168 3764362 ~ 3765023 (-)
G325206 NA non-coding downstream 79548 3722430 ~ 3722643 (-)
G325149 NA non-coding downstream 191793 3610164 ~ 3610398 (-)
G325181 NA non-coding upstream 263707 4071323 ~ 4133401 (-)
G325161 NA non-coding upstream 287703 4095319 ~ 4167960 (-)
G325240 NA non-coding upstream 384426 4192042 ~ 4193011 (-)
G325243 NA non-coding upstream 392263 4199879 ~ 4200183 (-)
G325287 NA non-coding upstream 492896 4300512 ~ 4300842 (-)
G324936 NA other downstream 682092 3013673 ~ 3120099 (-)
G323133 NA other downstream 2565342 1205829 ~ 1236849 (-)
G322580 NA other downstream 3696372 103265 ~ 105819 (-)

Expression


CI01000110_03802977_03807616(FUT11) Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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CI01000110_03802977_03807616(FUT11) Expression in each Bioproject

Bar chart with 44 bars.
CI01000110_03802977_03807616(FUT11) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007182 fut11 coding NC_007125.7 CM002898.2 14608099 ~ 14622984 (+)
bowfin (Amia calva) AMCG00021453 NA coding CM030130.1 CM030130.1 18109078 ~ 18112221 (+)