G323274


Basic Information

Item Value
gene id G323274
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 1282046 ~ 1347313 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU367583
GTTACTCATTACTCAAAAATTTAACGCACTGTCACCAGGTCAATCAATCCAATCCATACGCCACCCCACCCAGACAACACAAAGCATGCTGGGAGATGATTAATAATCATTACCTTGTCATTGACCACGCTCTTGCCATCCCAAGCCCAGCCGCGCTTGGTGAAGTAGTTGACGGTAGCAAACTCAATCAGGGCGGAGAAGACAAAGGCATAACACACGGCGATGAACCAATCCATGGCTGTGGCGTAGGCGACTTTCGGCAGGGAGTTACGAGCGCTGATACTCAAAGTGGTCATAGTCAGTACAGTGGTCACACCAAATACAGTTCGGGCTGGAACAGACTCTCGGTTCAGCCAGAAGGACACTTGGGATAGGATGACGGTCATGATGCACGGCAAGTACGTCTGAATCACAAAATAACCGATCTTCCTCTTCAGATGGAAGTGGGCTGTCATCACAGTGTACTCACCAGTGCTGGATCTGATGGTTTCATTTCCCACAGTCTGTCCCAGTAGGTCATACTGGTTCAGTCTAGAGCTCTCTTCTTCTACCACCACAGAGTTGGATGCGTTCTTCGTCCAGGTGTACGTCACTTCTGTCGTTGTGTAAGCATAGCTGCCAAATTTAAGCGGACAGGAGTGGAAGTCCATGGGGAAATCTTCAAGATGCATCGGACACTCAGCATGCACTGTCAACCTCATGGTGTACAGCAGGGTGCCGTCATCTTGGATACGCAGCAGTTTGTTGGGCATGGTCATGTTGTGTGCGACAGATTTCTTCCCGTTGTGAAAGAATGTGTCTGGAGTCCAGATCTTACTGGCCATCAGGTTGTTCAAACGCAGAATGTTCATTGGTCCCTCGAACTTCAGTCGTTCATCCTTCCAGCTCTGCCTGAAGAATACGTCGATGGTGTACTCCATATCGGTGTCTGAAACGGGGCCAAAACTGGTGACATAGATGTCGGTCTTCACTGTGGTAACTCGATCTCCAAGTCCGGGTCTCAGCCGGTTGTCATATCCGTCCAGCAGGCGGTCCAGGATGCGTGTGAAGAGTGTGATGTTGTTTTTGAAGGCATCTGTTGTGGCATCTGCAGACACTGACCTGGTGTGCCAAAACAGCGTCAACACGAAGATGAGAAGATGAAGCGCGAACCTCTCCCTCATTTCTGCCACTCAAACCTGTGATCCACCAGATCCGCTCTGTTCTTATGAATAAAGGCTGATAATTAAAACCGGGAAGTGAAAGTTTATTGCCAGCCGATGAAACAGGATCACGAGTGTTGTTTAAAAGCGCGCACGTGGATCGGGAACGAGCCTTAATGAATTCCCATAATAATTCACTATAATATCAGACGCGAAGAATGAGGGTCTCTGATCCTCCACCGCGCCTCTCTCTCTTTAACTAACGCACCGACGCGCATTGACGCCCCGTGATCTCAGATCTTCTTTACTGAATCTCATACTGCTCACTATTTATTTTTTTCTCTTGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU367583 True 1492 lncRNA 0.49 9 1282046 1347313

Neighbor

gene id symbol gene type direction distance location
CI01000110_01135230_01139236 AP1AR coding downstream 142810 1135131 ~ 1139236 (-)
CI01000110_01126191_01127662 NA coding downstream 154384 1125835 ~ 1127662 (-)
CI01000110_01112020_01115441 NA coding downstream 166464 1111926 ~ 1115582 (-)
CI01000110_00929399_00931607 NANOS1, NANO1 coding downstream 350321 929146 ~ 931725 (-)
CI01000110_00779093_00781105 LBX2 coding downstream 500390 778574 ~ 781656 (-)
CI01000110_01422600_01428949 SELT2 coding upstream 74580 1421628 ~ 1428949 (-)
CI01000110_01432049_01434499 RAB33A coding upstream 84392 1431705 ~ 1434499 (-)
CI01000110_01436253_01450759 NA coding upstream 88892 1436205 ~ 1450759 (-)
CI01000110_01864492_01865547 NA coding upstream 517165 1864478 ~ 1865547 (-)
CI01000110_01988105_01990600 SLITRK4 coding upstream 639276 1986589 ~ 1991741 (-)
G323149 NA non-coding downstream 31966 1243849 ~ 1250080 (-)
G323125 NA non-coding downstream 106529 1175311 ~ 1175517 (-)
G323124 NA non-coding downstream 106965 1174860 ~ 1175081 (-)
G323110 NA non-coding downstream 131892 1149867 ~ 1150154 (-)
G323107 NA non-coding downstream 135668 1146115 ~ 1146378 (-)
G323322 NA non-coding upstream 18346 1365659 ~ 1443509 (-)
G323342 NA non-coding upstream 72033 1419346 ~ 1419646 (-)
G323346 NA non-coding upstream 109099 1456412 ~ 1456691 (-)
G323388 NA non-coding upstream 172446 1519759 ~ 1520020 (-)
G323133 NA other downstream 45197 1205829 ~ 1236849 (-)
G322580 NA other downstream 1176227 103265 ~ 105819 (-)
G324936 NA other upstream 1768145 3013673 ~ 3120099 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location