G324034


Basic Information

Item Value
gene id G324034
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 2343876 ~ 2344209 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU368404
TTTTTAAATAAATGCTGTTCTTTATTAATAAAATGTTTCCATAATAACAGTTTTATAATAACATAATAACAGGTTTTTTTTTTTAATTGCTAACATCCTTTTGTCCAATCTGTAGCCACATTTTCAAAACTCTAAACACAATTAGCACAACATCTGTCTGTTGTGACCATACCATTAACACAATTCGTGTCGTTTTCACACAAAATGCAGCTAATTAACGTGTTTCTAAAATGCTTAAATTTTCTTTTCACACAAACTTACCCAGTACCAAAATCATGGATATTTTTTATCTTATTTACAAATGCTTAAACACAGCATGTCAGAAATGAAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU368404 True 334 lncRNA 0.28 1 2343876 2344209

Neighbor

gene id symbol gene type direction distance location
CI01000110_01988105_01990600 SLITRK4 coding downstream 352135 1986589 ~ 1991741 (-)
CI01000110_01864492_01865547 NA coding downstream 478329 1864478 ~ 1865547 (-)
CI01000110_01436253_01450759 NA coding downstream 893117 1436205 ~ 1450759 (-)
CI01000110_01432049_01434499 RAB33A coding downstream 909377 1431705 ~ 1434499 (-)
CI01000110_01422600_01428949 SELT2 coding downstream 914927 1421628 ~ 1428949 (-)
CI01000110_02794268_02794597 NA coding upstream 449973 2794182 ~ 2794597 (-)
CI01000110_02890041_02906679 NA coding upstream 545751 2889879 ~ 2908219 (-)
CI01000110_03015589_03024689 IDS coding upstream 671041 3015250 ~ 3025361 (-)
CI01000110_03084686_03087106 NA coding upstream 740230 3084439 ~ 3087106 (-)
CI01000110_03095980_03103572 RNF20 coding upstream 751247 3095456 ~ 3103572 (-)
G323946 NA non-coding downstream 35331 2233196 ~ 2308545 (-)
G323987 NA non-coding downstream 137427 2203711 ~ 2206449 (-)
G323985 NA non-coding downstream 142464 2201085 ~ 2201412 (-)
G323983 NA non-coding downstream 149049 2194568 ~ 2194827 (-)
G323975 NA non-coding downstream 158984 2184655 ~ 2184892 (-)
G324103 NA non-coding upstream 86476 2430685 ~ 2430913 (-)
G324118 NA non-coding upstream 108066 2452275 ~ 2452639 (-)
G324142 NA non-coding upstream 133778 2477987 ~ 2478194 (-)
G324755 NA non-coding upstream 319978 2664187 ~ 2712243 (-)
G323133 NA other downstream 1107027 1205829 ~ 1236849 (-)
G322580 NA other downstream 2238057 103265 ~ 105819 (-)
G324936 NA other upstream 771249 3013673 ~ 3120099 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G80346 NA non-coding NC_053118.1 CM020915.1 41484572 ~ 41486069 (+)
mexican tetra (Astyanax mexicanus) G80026 yipf4,LOC106576945 non-coding NC_035905.1 CM008308.1 12522704 ~ 12523100 (+)