XLOC_011198


Basic Information

Item Value
gene id XLOC_011198
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 4470293 ~ 4478732 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024578
gctggatctgagctacaatcacccAGGACCATCAttagtcaagctgctctctgatccAAACTACAGACTGGAGAAACTCAAtttggATCAAGGAGGGGAGCacaggattacagcaggaccacagAAATaTGCATGTGATCTCACACTGGATGTAAACACGGCAAACATTCATCTCGCTCTGTCTCAAAGGAACCGAAAGGCCAGACATGTGAAAGAGAggcagccgtatcctgatcatccagagaGGTTTTACATGTGGCCTCAGGTTTTATGTAGAGAGAGACTGGCTGaacgctgttactgggaggttGAATGGAGCGGAAGAGCTGATATATCAGTGACATACAAAGAAATGAGCATCGATGATTGGAAGTTTTCGTTTGAATTTCGAGAAAGATCCTGGTGTCTGATctgtttaaatgacaaattatctGTCTACAATGGGCATACAAGGACAGAGATCTCTTTATGTCCCTCTAGAAGAGTTGGAGTGTATCTGAACTGTTCTGCCGGCACTCTTTCCTTCTACGGtgtctctgacacacacacactcacacatttatacacatttaacGTCACATTCACTGAACCCCTCTACGCTGGATTTTCAGTTTATAGTGGTAGTTCAGTGTCTCTGCATCAGATTATAGCCTTCAATAAGAGATATGATGCTGAATGACAGAGGTGGGtagtattaaattacatttacttcgttacatttacttgag

Function

GO:

id name namespace
GO:0019220 regulation of phosphate metabolic process biological_process
GO:0051174 regulation of phosphorus metabolic process biological_process
GO:0042325 regulation of phosphorylation biological_process
GO:0016310 phosphorylation biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024578 True 728 lncRNA 0.43 3 4470293 4478732

Neighbor

gene id symbol gene type direction distance location
XLOC_011197 NA coding upstream 4735 4460750 ~ 4465558 (+)
XLOC_011196 si:zfos-364h11.2 coding upstream 28452 4427463 ~ 4441841 (+)
XLOC_011195 si:zfos-364h11.2 coding upstream 54221 4398102 ~ 4416072 (+)
XLOC_011194 crls1 coding upstream 84209 4368859 ~ 4386084 (+)
XLOC_011193 mcm8 coding upstream 104972 4325693 ~ 4365321 (+)
XLOC_011199 NA coding downstream 10523 4489255 ~ 4492713 (+)
XLOC_011200 KLHL29 coding downstream 99820 4578552 ~ 4854851 (+)
XLOC_011201 CABZ01016068.1 coding downstream 182187 4660919 ~ 4661043 (+)
XLOC_011202 FO082819.1 coding downstream 391671 4870403 ~ 4870522 (+)
XLOC_011203 cdc5l coding downstream 582403 5061135 ~ 5105922 (+)
XLOC_011192 NA non-coding upstream 237802 4231389 ~ 4232491 (+)
XLOC_011187 NA non-coding upstream 1285462 3178465 ~ 3184831 (+)
XLOC_011185 LO018445.1 non-coding upstream 1384528 3085649 ~ 3085765 (+)
XLOC_011183 NA non-coding upstream 1445301 2787483 ~ 3024992 (+)
XLOC_011208 CU929322.1 non-coding downstream 1358576 5837308 ~ 5837694 (+)
XLOC_011213 NA non-coding downstream 1729427 6208159 ~ 6211272 (+)

Expression


Co-expression Network