CI01000112_00071976_00072854


Basic Information

Item Value
gene id CI01000112_00071976_00072854
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 71976 ~ 73116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_00071976_00072854.mRNA
ATGGCACCAAAAAAAAAGAACAGAACTCAAGAAAAAGTGAATAATGAAGCGCAAGAGATGTCGCAACATTCTGATCACGCAGACGAGCTAAGAGAGATAGAGGAAGATGATGACGACAGTGAAGCTACGAAAGTAACTGAGTTGAACCCCAGCAATGCAGATGTTTTACAAGCCATTAAAGAAATGGACAAACGAGTTACGAGTAAAATCAACGGTGTTATGTCAGCGATCAAAGAGGTGAAGGAGCGAGTGAAAGAGGCCGAAGAACGCATTTCGGGAGCGGAGGATGAAATCGTTCAACTGTGTGCTCACACGAACTCGCTTGAATCACAAGTTAAAAAACTGACAGACAAAGTTGATGATATGGAAAACAGAAACAGATGGAACAACCTAAGGTTGGTGGGTTTACCGGAAAAAGAAGAAGGAAACGATGCATGTGCTTTCTTAGAGGCCTGGATTCCAAAAACTTTGGAAATGGACTCAAGCACATCTTTAGTCATAGAGCGCGCACATAGAGTGGGTCCACAACGAAACATAGGTGACCAGAACACAAGACGAGATGCCAGTGCACCATCAAGAACACTAATAATGAAGTTCTTGAACTACAAACAAAAAGAACAGGTGCTGAGAGCGGCCAGATCCAAGGGGATGATTTCATACAAGGAACACACTCTTCGTTTCCATCCAGATGTTTCTGCAGAAGTTCACAGGAAGCAGAGAGCCTATGATGGTGTGAGACAGAGGCTACGAGAGAGAGGAATCAGTAAACACAGGATCATCTACCCTGCTTGTCTACTTGTTACACACCAGGAGAAATCAAGGGTGTTTGACACACCAATGGCAGTGGAAAGCTTCATAGAAGAATTAGACAAAGAATAAAGGTGGGCTCAGTTCAGCTGGACTATTATAGTCTTGAATGTAGGCTGCTTTACAATAATTCATATTGCATTCCACAAATGTCTTTATGCTTTTTTTGTTGTGAGGACTGAATTAACAATAACATGTTAGATTGTGACTAATCGAGACTAATTTGTAAAATAATTAGGCAGATTCAGTTGTTATTGTTCTATGGAGATGTGAAAATGTGTGTTTACATTTTAATATAATAAGTGAGAATAATTTTACAAACAGGGTTGTGATA

Function

NR:

description
unknown

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_00071976_00072854.mRNA True 1141 mRNA 0.40 1 71976 73116

Neighbor

gene id symbol gene type direction distance location
CI01000112_00059545_00061349 NA coding upstream 10240 59099 ~ 61736 (+)
CI01000112_00220804_00222613 NA coding downstream 147548 220664 ~ 222659 (+)
CI01000112_00379383_00617969 RPTOR coding downstream 306267 379383 ~ 617969 (+)
CI01000112_00627027_00637276 NA coding downstream 553911 627027 ~ 637276 (+)
CI01000112_00655682_00669456 P4HB coding downstream 581663 654779 ~ 669948 (+)
CI01000112_00672164_00673174 PPP1R27, PPP1R27B coding downstream 598823 671939 ~ 673882 (+)
G327670 NA non-coding upstream 2103 17420 ~ 69873 (+)
G327668 NA non-coding upstream 55330 16104 ~ 16646 (+)
G327770 NA non-coding downstream 23595 96711 ~ 96943 (+)
G327771 NA non-coding downstream 23913 97029 ~ 97539 (+)
G327772 NA non-coding downstream 24429 97545 ~ 98151 (+)
G327776 NA non-coding downstream 28123 101239 ~ 101564 (+)
G327777 NA non-coding downstream 28606 101722 ~ 101956 (+)
G328456 NA other downstream 1158906 1232022 ~ 1233118 (+)
G329125 NA other downstream 2544588 2617704 ~ 2618151 (+)
G329194 NA other downstream 2847138 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 5011604 5076817 ~ 5101845 (+)

Expression


Co-expression Network