CI01000112_01473681_01484126


Basic Information

Item Value
gene id CI01000112_01473681_01484126
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1473357 ~ 1484634 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_01473681_01484126.mRNA
ATATATAAAGAATCTACTTTAATATGCAAATATTCATAATATTAACAGAATTTCTGTAATTGGTATATTACCATTTGTGTTATTTTAAGCTATGTTTAGTCAAATGTCTAATTGGAAATTGTATTTCTTTCTTTTTAGTTTCACTCACTCGTAATAGAGTTGTGACATCAAAATATAATAAATGCTGGAATTTCAACTCATATATCTCGACTGTAATGGATGGAGTTTAACTTGCTGTCGAACTTCATAAAGATTATACATGAAGGGAGGACACTACAGTGAAAAGCTATTAAGAAGCTACTGAAAAGCAAGCATCAAGATAAGATGGAGGATAAATCCAGCAAATCTGGGAAAGCTTCATCGGTCAGTTCTAAGAGCACCTCTTCAAGATCTTCGGCCAGTGATGTAGCGGCAAGAGCAAGAGCTGTGGCTAAAGTGGCACGAGCGTGTGCGTCATTTGCAGAGAGAGAGCTGGCCATGAAAAAAGAAAAAGCAAGATTAGAAGCAGAGGAAGCCACATTGGAGGCTACACTGGAAGCATTACAAGCAGAAAAGGAGGCAGCAGCTGCGCAGGCTGAGGCCGAAATTCTAGAAGCTGCAGCAGAGCATTCCTTTGTACATACGCTGCCATACAGTACACCACGAGCAGATCCTATCCAAGCAGCCAGCATGATAGACTTTGCAAAATATCTTGCACGCAGAGAACTTGTTACTACCGGACTCACAAAGTTCGATGATTGTCCCGAAAGTTATAGAGGGTGGCAAGCTTCTTTCATTAATGTCACTGAAGGACTGGATCTGACAGCAGCCGCTGAGGTTGTAGAAAGTGCACTTTTCAGTAAGCTTGACAACTTTCCTCGCATATCCAACATAGACAATTTCAAGTTAAGAGAACTTGGAGATCTCCTCTTGGAGTTACAGTCTGCCAAAGAGGATGGTTACTTACCAGGGTTAAACTACTTAGACACAGCCCATGGTATCAACCCAATTGCTGATAAATTGCCACATAATCTGCAGGAGAAGTGGGTTTCCGTTGGATCAAGGTACAAAGATGAATACAACGTGTCCTTTCCTCCGTTTTCCTTCTTTACACAATTTGTCTGTTGCGAAGCCAGTACACGAAATGACCCCAGCTTCAAGCTCTCTACCAGCAACACCACGACTCCCAGATGTTGTGCATCAACCTCTCACTTAGCCAGAGACTGCAGAGCACCACTAGAATGCAGAGAATGTGAAAGTGAACGCCACTCCACAGCTATGCATCCGGGTTCGGCTCCTTGGACCTCAAACCCTGCAGAACAAGAGTGTACAGAACAAGAAACTGAGAAGCAAGAGAACCTCAGTGACTCAGCTGCTGTAAGTTCCCAGTGCACAGAGATGTGTGGTACAAACCAGCCAGCTCGTTCTTGTTCGAAAATATGCTTGGTGAAAGTGTATAAGAAAGGACAAGCAGAACATGCAGTTAACATGTATGCAATCCTTGACGACCAAAGTAATCACTCCTTGGCTCGTTCAGAGTTCTTTGACTTATTCGACGTTCAAAGCAGCCCACATCCTTACTCACTCAGAACCTGTGCAGGTGTCATGGAGATGACGGGCAGGAAAGCGCATGGATTCCAGATAGAAGCATCTAGCGGAGACCAAGCCTTCTTAAAGATCATGGAGAGGGACTTTCACAAAGACGAGACAAACTTCTGGGTCACTCCTCTACCCTTTAAATCACCCCGACCGCTTCTCCCTAACAATCGAGATCAAGCACTCTCAAGGTTTCTTTTCTTGAAGCGCACTCTAGACAAAAGACCGGAGATTAGAGAAAACTTTCAAGAATTCATGGGGAAGATGTTAGAGAACAAGCACGCCGAATTAGCTCCTCCACTTAAAGAGAATGAAGAATCCTGGTATCTACCAACGTTTGGAGTCTATCATCCACGAAAACCAGACCAGATAAGGGTAGTCTTCGATTCCAGCGCACAGTACCATGGTCTCTCTTTGAACAGCATCCTTCTCACAGGACCCGTCATGAACAATTCCCTCCTTGGAGTGTTGTTACGCTTCCGAAAAGAACCGATAGCTGTGATTGCTGACATTCAGCAAATGTTCTATTGCTTTGTGGTACAGGATAATCACAGAAAGTACCTGAGGTTCTTGTGGCACCGAGACAATGACATGTCAAAAGAGATCACGGAGTACCAGATGCCTGTTCATGTCTTTGGAAACAGCCCTTCCCCTGCCATTGCAATCTATGGTCTGAGACGCGCTGCACAGGAAGGTGAACATGAACATGGGTCAGACACTCGCCAATTTGTTAAGAGGCATTTTTACGTGGATGATGGTCTGATATCTCTGCCAAACGAAGAGGATGCCATCAGTCTGCTGAAGCATACCCAGAAAGCTCTTGCTCAGTCAAACATAAAACTCCACAAAATAGCTTCAAATTCAACCACAGTGATGAAAGCCTTTCCTGCTTTCATCACTGTGAAAATTCCTTACAATATTTGGAAAATCTCCATATACCATGTACTTATGTCCCACTCTCACTTTCCAGTTCAAACAGTATTAGCTGTAGAAATTGCAGAAATGATACTTGAGGAAATCGATTTCAAACCAGTTGCAGTCAAATTCTACTGTGACAGCAAGATAGCTCTGGGCTACATATTCAACAAGACCAGGCGTTTCTTTGTGTACATACACAACAGAGTGCAGCGAATCCATCAAAGTACAGTCCCAGAACAGTGGCATTTCGTACCAAAAAAACAGAACCCAGCCGATATTGCCACCAGGTCAGTTTCTGCATCACAGCTTGCTAACATGCAATGGTTTCCTGGTCCAGACTTTCTGCACAAACCCCTCTCAACTCAAAAAGAGACTCAAAAGACATTTGAGTTGGTAATGCCAGAACTGGATGGAGAAATCCAGCCTCATGTCACAAGTTTTGCAACTCTCACTGAAGAAAGGCATCTTACTTCAGAAAGCTTTAAACGTTTCTCTTCCTGGAAAGCACTTCTAAGAGCTATTGCACTGCTTATTCACATAGTTCGTTCATTCAAGCTGAACTCAAGTACTCACACAAATGAATGCAAAGGCTGGCACCTATGCAGAAAGGCCAGAGCGCCCGAAGAGCTCTTAGCAGCCAAGCTTGTTATCCTCAAATCTGTGCAAAAAGAAACATACAGCGATGAATCCAGCGCCTGTGTAGAACAGAAGAACATCCCAAGAAGCAGTGTACTTATGAAGCTCAACCCTCTGATCTACTTAGAGGGTAGATTTGCACAGCAGAAAATGGCGGATCTTCCACCTGAGCGTCTTGACATGTCTCCTTTCACCTATATGGGTTTGGACGTATACGGCCCATGGACTGTTCTGACTCGACGCGCTAGAGGAGACGCAGCAAACAGTAAACGTTGGGCAATCCTTTTTACGTGCATGAGCACTAGAGCAGTTCATTTGGAAGTGTTAGAGTCCATGGATACATCCAGCTGTATCAATGCATTACGTCGCTTCTTTGCCATAAGGGGACCAGCAAAACAGCTTGGATCCGATTGTGGAACAAATTTCGTTGGAGCTTGCAAAGAACTTGGTTTCACAAAAGATCACACTGTCCAGAAAAGTGTCTGCAATAATCAATGCCAGACCACCAGTTCACCCAAAAGTCTGGGTTTCCCCTTGAAGTTCCTACCTGCAACTTTTCAGAGAAAGATCTTTATGGAAACCAATGGAGAAAAGTACAGACCCTTGCAAATCTGTTCTGGACCCGCTGGAAGCAAGAGTATCTACCCATCTTGCAAATGGACTGAAGCATACACCAATCTTCAAGTTGGAGATATTGTTCTCTTGAAAGACAGTACCCTTTCTCGTAATGATTGGCCTATGGCAATGATCACCAATACGTTCCCAAGCACTGATGGACGTGTAAGGAAAGTAGAGGTTAAGACGACTTCTCATGGCCATGCAAGTCTCACAAATCTGTTATCTGTTTTAAGTGACATCAATGTAAATACTTCCGGTGCGACTGACTTGGGGTATTTAAAGGGATTTGGCAAACCACTCAAGGAAGAATCTGCATTCAGAACTTCCCGCACAATTGCTGTGTGTATCTCTCTATTTGCCAGATTGACGCCTGCCATTTTCAGGGTCAGATTCCACAAGGGTCTGGTCCCATCTGCATCAAGCCAGGACACACACATTTTCACATGTACAGTAGGAGATGGGGTGGAGGTACTTAAAGAGGCCATTCGAACCTCATAGCACTCATTGCTACATGGCCCGGTAGCACTGGAGCTAAATTATACAACACAGATTATGGTAGGATGGACACCACCCATTCTCCTATACACAAACATACAGACACACCCTCACTACTACAACCTTACAGCATCTCTACCTGGTATAGATCATAGGACTATCCAGGCTAAAATTATTCACATCATGCAAATCTAGCATACATTATTCACCTTCATACACATAGGACCAGGGAAATTATTTTCATAATTTCTTTTCAATTGTGTCAAACAATTTAGTGTTATAGTCTTGAACTTCCTGTGTGCAAACCCTGTAATGTGCATAGAACATGTGCATGGCTATAGTCACATATCAATTAATTTAATTTCTGATTATTCAAATCCTACATACAAAATCTAAATGAGACATTCAGCAATGCAACTGGTCTATTTGGACAAAATGTTTATTATGTCCAATCCTTAGCACTGTTGCAAACTAGGAGGGCCCCCTAGTTTCCAACTAGTGACTAATGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_01473681_01484126.mRNA True 4753 mRNA 0.43 11 1473357 1484634

Neighbor

gene id symbol gene type direction distance location
CI01000112_01304699_01321467 NA coding upstream 151649 1304303 ~ 1321708 (+)
CI01000112_00975908_00994568 RHOT1B, RHOT1, RHOT1A coding upstream 477292 975908 ~ 996065 (+)
CI01000112_00967726_00973214 NA coding upstream 499878 967726 ~ 973479 (+)
CI01000112_00943876_00960636 NA coding upstream 512721 943876 ~ 960636 (+)
CI01000112_00931318_00942127 SUZ12B, SUZ12 coding upstream 530972 931147 ~ 942385 (+)
CI01000112_01493953_01497856 NA coding downstream 9319 1493953 ~ 1498684 (+)
CI01000112_01534218_01550547 MGAT5B coding downstream 49584 1534218 ~ 1550876 (+)
CI01000112_01711753_01717045 NA coding downstream 226598 1711232 ~ 1717114 (+)
CI01000112_01753138_01753764 NA coding downstream 268322 1752956 ~ 1754407 (+)
CI01000112_01831462_01857713 NA coding downstream 346828 1831462 ~ 1858703 (+)
G328612 NA non-coding upstream 6437 1466697 ~ 1466920 (+)
G328611 NA non-coding upstream 7048 1466032 ~ 1466309 (+)
G328609 NA non-coding upstream 11748 1461402 ~ 1461609 (+)
G328608 NA non-coding upstream 12146 1460925 ~ 1461211 (+)
G328601 NA non-coding upstream 29943 1443081 ~ 1443414 (+)
G328588 NA non-coding downstream 69977 1554611 ~ 1555332 (+)
G328794 NA non-coding downstream 193511 1678145 ~ 1678925 (+)
G328876 NA non-coding downstream 267766 1752400 ~ 1752626 (+)
G328878 NA non-coding downstream 270318 1754952 ~ 1755283 (+)
G328879 NA non-coding downstream 271554 1756188 ~ 1756537 (+)
G328456 NA other upstream 240239 1232022 ~ 1233118 (+)
G329125 NA other downstream 1133070 2617704 ~ 2618151 (+)
G329194 NA other downstream 1435620 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 3600086 5076817 ~ 5101845 (+)

Expression


Co-expression Network