XLOC_011206 (CU571310.1)


Basic Information

Item Value
gene id XLOC_011206
gene name CU571310.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 5623514 ~ 5629978 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022384
gaaacttttaaaatagataatttcaaaaatagttttggcacaatggcgccccccatgtgtggcgcccctatgagctgcataccccctttttgcgccactggttACACAGTATGTAGACATCAAAAAGCCCCATAAGgtagaatgttcatttttgagtgaactgtccctttagctAATATTAACTAATGCTACCTTATTGCGAGACGCGACCAATATTTCATAATATCATGCTGCATATCTCAAACCCTCTCACAGATATACTGTTGCTCATTGTGCAACAGTAAAATATGTCTCTGACAGGCTGCTATTGTTTTGAGAAAGTGTGTAAAGGCTAAAAGTGAAGCGACTCACCATGGAGGTGCCGTGGAACTTCAGGTTCGGGATCGTGATTTTAGGAGACTCTTTTGTGGGGAAATCCTCTCTTCTTCATCGCTTCACTGAAGGCACGTTCGAGGAGGCCCGTCAGTCTCCTCTGGGAATCGATTTTAAGGTGCATAACATGAAGATTGAGCCTAATGTGCTGATTAAACTGCTTCTGTGGGACACGGCAGGACAGGAGAGATTCAGGTCAATCTGTAAATCCTACATGAGGAACTCTGTTGGCTGTATCCTGATGTTTGACGTGTCTCAGCGGAAGTCCTTTGAGCACGTTTCCCTCTGGCATCAGGAAGTGCTGGATTACGTGAAGCCAAACCCGATGATATTCCTGCTGGTGGCTCATAAAAGTGACCTGGCCGTGTGCAGAGAGGTCAGAAAGAGTGAAGGAGAAGCTCTGGCTGAGAAACTCAACATGCTGGCCTATCTGGAGGTATCCACAAAAGACTACATTAACGTCAGCGAGGCGTTCGAGACTCTGACCACGGGAATATATCAGCAGTTCCAGAAAGGCGAAATCTCCGTTCGTGATGACTGGCACGGTTTAACGGTTGGGACTTCCGTTAAAAACGAGAAAACCGTGACAAAAAAGTCTGCCTGCTGCAACTGCGGATGAATCTAAAACACTGGACACTCCTGGAGAGAGTATTGTAGTCTAAACAATGATGTTTACCACAGTGTTTTACACAGTATGTAAACTCAAACAGCACTGAACGCCATGTAACTTTAGGTAAAGGGGATCAAATATTGGAGATAATCATTAGTTTATGAATGAACAATCTATAAAagattgacttttttttaacagtgtggtaAATCATGCTAGAAGCATGGTAAAAGTATGGTAAATCATGTTAGAAGTTGTTAGAAGTGTGGTAAATCATGCTAGAACCATGGCAGTGTGGtaaatcatgttagaaacatactaacaatgtGATATATCATGCTAGAAACAGGCTAGCAGTTTGGTAATCATGCTAGACACATTCTAACAGTGTGGTAAATTTTGCTCAAAACATGCTAACAGTATGGTAAATCTTGTTAGAAGTctgttaaatcatgctagaacCATGGTAGTGTGGTAAATCAGGGTAAAACCATACtaatcctgctgaaaaatccagcttaaacgaacctaggctggttggctggttttagctggtcgaccaggctggttttagaggggttttggccacttccaggctggtttccagccatttcca
>TCONS_00022383
gaaacttttaaaatagataatttcaaaaatagttttggcacaatggcgccccccatgtgtggcgcccctatgagctgcataccccctttttgcgccactggttACACAGTATGTAGACATCAAAAAGCCCCATAAGgtagaatgttcatttttgagtgaactgtccctttagctAATATTAACTAATGCTACCTTATTGCGAGACGCGACCAATATTTCATAATATCATGCTGCATATCTCAAACCCTCTCACAGATATACTGTTGCTCATTGTGCAACAGTAAAATATGTCTCTGACAGGCTGCTATTGTTTTGAGAAAGGTGTGTATGCAAAGGTGCATTCTGCTGACCTCTccctgtgcgtgtgtgtttttaacCTGTTTGTTCAGTGTGTAAAGGCTAAAAGTGAAGCGACTCACCATGGAGGTGCCGTGGAACTTCAGGTTCGGGATCGTGATTTTAGGAGACTCTTTTGTGGGGAAATCCTCTCTTCTTCATCGCTTCACTGAAGGCACGTTCGAGGAGGCCCGTCAGTCTCCTCTGGGAATCGATTTTAAGGTGCATAACATGAAGATTGAGCCTAATGTGCTGATTAAACTGCTTCTGTGGGACACGGCAGGACAGGAGAGATTCAGGTCAATCTGTAAATCCTACATGAGGAACTCTGTTGGCTGTATCCTGATGTTTGACGTGTCTCAGCGGAAGTCCTTTGAGCACGTTTCCCTCTGGCATCAGGAAGTGCTGGATTACGTGAAGCCAAACCCGATGATATTCCTGCTGGTGGCTCATAAAAGTGACCTGGCCGTGTGCAGAGAGGTCAGAAAGAGTGAAGGAGAAGCTCTGGCTGAGAAACTCAACATGCTGGCCTATCTGGAGGTATCCACAAAAGACTACATTAACGTCAGCGAGGCGTTCGAGACTCTGACCACGGGAATATATCAGCAGTTCCAGAAAGGCGAAATCTCCGTTCGTGATGACTGGCACGGTTTAACGGTTGGGACTTCCGTTAAAAACGAGAAAACCGTGACAAAAAAGTCTGCCTGCTGCAACTGCGGATGAATCTAAAACACTGGACACTCCTGGAGAGAGTATTGTAGTCTAAACAATGATGTTTACCACAGTGTTTTACACAGTATGTAAACTCAAACAGCACTGAACGCCATGTAACTTTAGGTAAAGGGGATCAAATATTGGAGATAATCATTAGTTTATGAATGAACAATCTATAAAagattgacttttttttaacagtgtggtaAATCATGCTAGAAGCATGGTAAAAGTATGGTAAATCATGTTAGAAGTTGTTAGAAGTGTGGTAAATCATGCTAGAACCATGGCAGTGTGGtaaatcatgttagaaacatactaacaatgtGATATATCATGCTAGAAACAGGCTAGCAGTTTGGTAATCATGCTAGACACATTCTAACAGTGTGGTAAATTTTGCTCAAAACATGCTAACAGTATGGTAAATCTTGTTAGAAGTctgttaaatcatgctagaacCATGGTAGTGTGGTAAATCAGGGTAAAACCATACtaatcctgctgaaaaatccagcttaaacgaacctaggctggttggctggttttagctggtcgaccaggctggttttagaggggttttggccacttccaggctggtttccagccatttcca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102580

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022384 False 1598 mRNA 0.43 3 5623514 5629978
TCONS_00022383 True 1666 mRNA 0.43 2 5623514 5629978

Neighbor

gene id symbol gene type direction distance location
XLOC_011205 fam167aa coding upstream 1074 5611166 ~ 5622440 (+)
XLOC_011204 runx2a coding upstream 106821 5351922 ~ 5516693 (+)
XLOC_011203 cdc5l coding upstream 517592 5061135 ~ 5105922 (+)
XLOC_011202 FO082819.1 coding upstream 752992 4870403 ~ 4870522 (+)
XLOC_011200 KLHL29 coding upstream 768663 4578552 ~ 4854851 (+)
XLOC_011207 rp1l1a coding downstream 138630 5768608 ~ 5822120 (+)
XLOC_011208 CU929322.1 coding downstream 207330 5837308 ~ 5837694 (+)
XLOC_011209 fndc4b coding downstream 216224 5846202 ~ 5928942 (+)
XLOC_011210 znf513b coding downstream 301552 5931530 ~ 5951745 (+)
XLOC_011211 zgc:194275 coding downstream 346705 5976683 ~ 5993452 (+)
XLOC_011201 CABZ01016068.1 non-coding upstream 962471 4660919 ~ 4661043 (+)
XLOC_011199 NA non-coding upstream 1130801 4489255 ~ 4492713 (+)
XLOC_011198 NA non-coding upstream 1144782 4470293 ~ 4478732 (+)
XLOC_011197 NA non-coding upstream 1157956 4460750 ~ 4465558 (+)
XLOC_011213 NA non-coding downstream 578181 6208159 ~ 6211272 (+)
XLOC_011217 NA non-coding downstream 756662 6386640 ~ 6392567 (+)
XLOC_011220 NA non-coding downstream 898045 6528023 ~ 6528543 (+)
XLOC_011230 NA non-coding downstream 1596752 7226730 ~ 7229012 (+)

Expression


Co-expression Network