CI01000112_02207728_02210655


Basic Information

Item Value
gene id CI01000112_02207728_02210655
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2207690 ~ 2210957 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_02207728_02210655.mRNA
ATTTAAATACACACTCAAACACCCATTCATATTAGACAATGGTTTCGTCAGCTTCCGGCTGCGCTGCGCCGGCGCGACCAGGCCGTGACGCCATAGGCGGCCGTCGCTCGATCGTTCGGTTTGGCCAGCGCAGCGTTTCCCACCAGAAGACCGACTACGCCCACATCGACAAACAGCACAGAGACGAAACAAGACGACAAGTGCAGTGTAGAAAAAGTGAACAAACATACCATCATTTCAGCTGTCTCACTGGCAGCGCAGATGTGAAACGGAACAGTAAATGCCAATCAAACAGTTTCCCTGTATTTTTTCCGCTAGTGTTCAAGGGGATAGATGGACACATTCCTGTCAAACAGCATAATGAGTCTGAGAGCAATGAGGGAAATGATGTTTAAATGCCCTTACTGACAGGCCTGACAAGCTGAGAACACACATGAGATGATACTTTACTTTAGTTGGGACTAATAACTGTCCGATGCCGATAATCTTGTATACGTGCCAAGACTTCACCGAACATCATGCCAGATGTCTGGGCAGACCAGCTGTCATCAGATCACCTAATTATGATGTAAAGATGAAGACTCATCCTAACTAAACAACAGAACACATTTGCTAAATGTTTGCTAAAGGTAATTACCAGCAGATAATGTTGGCTGGACATAAAAATGATTAAGTGGTTGGAAACAACTGTACGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_02207728_02210655.mRNA True 697 mRNA 0.45 2 2207690 2210957

Neighbor

gene id symbol gene type direction distance location
CI01000112_02109843_02114079 CDR2A coding upstream 93127 2109843 ~ 2114563 (+)
CI01000112_02060950_02068272 UNM_SA1261 coding upstream 139086 2060721 ~ 2068604 (+)
CI01000112_02017278_02032299 U2AF2 coding upstream 175277 2017278 ~ 2032413 (+)
CI01000112_01883455_01914770 NA coding upstream 292915 1883244 ~ 1914775 (+)
CI01000112_01865388_01878028 LUC7L3 coding upstream 329502 1865101 ~ 1878188 (+)
CI01000112_02240184_02240792 C16ORF52 coding downstream 26712 2237669 ~ 2241243 (+)
CI01000112_02261335_02262540 NH2L1, SNU13.S, BRAFLDRAFT_68109, SNU13.L, SNU13B, SNU13, SNU13A coding downstream 50378 2261335 ~ 2262781 (+)
CI01000112_02275641_02277644 NA coding downstream 64684 2275641 ~ 2278611 (+)
CI01000112_02295987_02301298 NA coding downstream 84942 2295899 ~ 2302593 (+)
CI01000112_02454665_02459341 NA coding downstream 243673 2454630 ~ 2459341 (+)
G328989 NA non-coding upstream 24248 2182904 ~ 2183442 (+)
G328988 NA non-coding upstream 26057 2181408 ~ 2181633 (+)
G328987 NA non-coding upstream 26319 2181028 ~ 2181371 (+)
G328986 NA non-coding upstream 26773 2180663 ~ 2180917 (+)
G328984 NA non-coding upstream 34162 2173268 ~ 2173528 (+)
G328926 NA non-coding downstream 30915 2241872 ~ 2243184 (+)
G328925 NA non-coding downstream 32411 2243368 ~ 2248408 (+)
G329015 NA non-coding downstream 39119 2250076 ~ 2282625 (+)
G329025 NA non-coding downstream 71732 2282689 ~ 2282910 (+)
G329079 NA non-coding downstream 199538 2410495 ~ 2410720 (+)
G328456 NA other upstream 974572 1232022 ~ 1233118 (+)
G329125 NA other downstream 406747 2617704 ~ 2618151 (+)
G329194 NA other downstream 709297 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 2873763 5076817 ~ 5101845 (+)

Expression


Co-expression Network