CI01000112_02269456_02270414



Basic Information


Item Value
gene id CI01000112_02269456_02270414
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2268832 ~ 2270414 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000112_02269456_02270414.mRNA
ATCTACTAGCTTCAAAGATGCCAACAATGCTGAAATTAATTGGTGGCAATGAAGGAGAATGGTTTTCATTTACTGGCAGGAACAATGGTGCCAGTTTGAAGAGGATATGGGTATGGGTGGGGCCATCGCAGGTGAAGGCTGTCAGGGTCTGGCTTTCAGATGGGCAAAATAAAACCTATGGAAGCCCAGAGGGAGATTACACGGAGTACATGTTCCAGCCTGGTGAGAGAATCACCTCACTGTCCCTGTGGGGCAACGGTAATGGGACACGTCTCGGAGCCATTAAATTCAAGACCAGCCGAAATAATGAATTTTTTGTGAAAATGACAAGCTGGGGTTTAAAAACAGAATACCCCATCGATGTCGGCTCTGGGTTTTGTCTGGGCATTAAAGGAAGATCCACATGTGACATTAACTGCTTGGGATTTGAGTTTCTCAAGAACATTCAATCCGTAGTTCTTACCGATGTCAATTATCCCACTATTGAGAAAGTGATTCCACAGGTGGCATCGGAAGAAATCAAATCCGTCACGTTGAAAAATGGGACCTCTGTCAGAACACAGCAAACAGTCGAAACTTCAAAAAAAATAATTCAAACAACCTCGTGGTCTATGAGCGAAAACATTACAGCAACATTCAGTGTGGAGGTGAAGGCTGGGATTCCAAGCTTTGGAGAAGCTTCCACAGGAGTCAGTACTAGCGTCGGAAAAGAAAACACTTACTTACATGTGAACAGAACTGAAAACACTGAAACTTTTTCCACCGATATAGAAGTTCCACCAGGGAAGAAGGTGGATGTAAAGATCACTATTGGCAGATGCTCTTTTGATCTGCCTTACACTGGCACCTTGAGGATGACTTGCTCTAACGGCAGTGTGTTTTCTTTTCAAACCAAGGGTCAATACAAGGGTGTCACTTACACTGATGTAAACATAGATACTAAAGAATTTGATCTTTGATATCAAGATTTAGGACTTCAGAAGATGCAACATCTGGATCAACACGCACATTCCCAAATTTCTATATATCCTAATTATTGTTAATATGTAATTCATTTTTCCAGGAGCTCATTGCTTCTACCTTCAATTAAATTGCTAACAGTGATTGTAAATTAATTGCCTAAATTATTACATTATTAGCTAACTGCATTCTCTAAATTGTAATGTTGACATGCACTCTCTGTAAAGCTGCTTTGAAACGATATGTATTGCGAAAGGTGCTATACAAAAAAATGTGAATTGAATTGAATTGAATTTAACACATACTGAATATTCTTGATGTTATTGATATGTTATATGATATGATATGGTATGATATGGTTGTCATGGTCTCATTCTGTTGTCAAAGTTACTGCTTGATTCCTTTCACCTGCCCTTAGTTTAGTTCGCATTACCCCATGTGTATATATAGCCCTCAGTTTGTTCAGTTCTTTGTCTGCCATTGTTTGTGTATAGCACACACTGTTTGTTTGTTTGTTTTGCCTTCTTTGGATTATCTGCTCGATGTATTTTTGTTTTGCTTTGTATATTAAAATTAAAAGTGCTGCATCTTAGATCTGTTTTGCCTCTTTTAGCCTGATTAAA

Function


NR:

description
natterin-like protein

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000112_02269456_02270414.mRNA True 1583 mRNA 0.39 1 2268832 2270414

Neighbor


gene id symbol gene type direction distance location
CI01000112_02242077_02249490 UQCRC2A coding downstream 19342 2241742 ~ 2249490 (-)
CI01000112_02213671_02227376 NA coding downstream 41189 2213300 ~ 2227643 (-)
CI01000112_02185619_02204929 C14H16ORF52 coding downstream 62550 2185093 ~ 2212627 (-)
CI01000112_02143799_02166631 NA coding downstream 102201 2143745 ~ 2166631 (-)
CI01000112_02096880_02108616 MFSD13B coding downstream 160216 2096566 ~ 2108616 (-)
CI01000112_02283088_02284461 NA coding upstream 12498 2282912 ~ 2284540 (-)
CI01000112_02308544_02314940 PYCR2, PYCR1, PYCR1A coding upstream 37704 2308118 ~ 2314940 (-)
CI01000112_02317589_02318500 MYADML2 coding upstream 47090 2317504 ~ 2318885 (-)
CI01000112_02324515_02338662 NOTUM1A, NOTUM coding upstream 53975 2324389 ~ 2339089 (-)
CI01000112_02412957_02416960 STRA13 coding upstream 142523 2412937 ~ 2417013 (-)
G329767 NA non-coding downstream 87267 2180814 ~ 2181565 (-)
G329769 NA non-coding downstream 111928 2156091 ~ 2156904 (-)
G329776 NA non-coding downstream 150044 2118564 ~ 2118788 (-)
G329718 NA non-coding downstream 173423 2095180 ~ 2095409 (-)
G329805 NA non-coding upstream 12231 2282645 ~ 2282857 (-)
G329799 NA non-coding upstream 33525 2303939 ~ 2304605 (-)
G329749 NA non-coding upstream 45412 2315826 ~ 2396508 (-)
G329839 NA non-coding upstream 99113 2369527 ~ 2378160 (-)
G329868 NA non-coding upstream 134987 2405401 ~ 2405724 (-)
G329672 NA other downstream 249379 2016704 ~ 2019453 (-)
G329569 NA other downstream 270973 1991666 ~ 1997859 (-)
G329559 NA other downstream 459093 1791084 ~ 1809739 (-)
G329587 NA other downstream 635510 1629776 ~ 1633322 (-)
G328642 NA other downstream 981874 1286655 ~ 1286958 (-)
CI01000112_03068505_03072256 NA other upstream 796906 3067320 ~ 3072879 (-)
CI01000112_03506254_03517454 NA other upstream 1234041 3504455 ~ 3518742 (-)
G330301 NA other upstream 1489385 3758244 ~ 3773774 (-)

Expression



Co-expression Network