CI01000112_02630198_02636420


Basic Information

Item Value
gene id CI01000112_02630198_02636420
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2629837 ~ 2636428 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_02630198_02636420.mRNA
AGTCAGTCATGCCCAGCATCTCCATCTCCATCCCTCCTCCTCCTCCTCCAGCCAGCAGTGGCTTTGACTCGGGCCACAAAAGCCCACTTCGCAAACTCAACTGGGAGCGGATCCCCAGAGAGCGCGTGGAGGGCCGTGAGAGTGTGTGGAGCAGCTCTCTGGATGAGGACGGTGACCTCTCCATCGACCTCAACTCTCTGAATGATCTCTTTGGGCAAAAAGAGGGCAGCAAGCAAGACCGGGTCGACGGCTTTCGGCGCAGCAGAGGAGTCGGCAGAGGCTCGCCGCTTAAAGGACTTTCCCTGAGGAAGAATGATGTCAACACTGAGGAAACTGAACAAGCTCAGTGTTTCAGCACAGATTCAGCAGTGAACGAAACTGCTGGTACCCCGAGGAGGAACCTCCAACAAGAGCAGGATCCCAAAGGCAGAACCGTCTCCTGCAGACGCTTTGTTCACAAGTCACATATTGCGCCCTTCCCCTGTATGTCCCACATCCATACGCACATCTCTAATGTCACGCTTCACTGCTGTCCAAATGAACTCAAACACAATGGTGGTGCGCGGCAGAAGGTAAACGCCCCGTCTGATACAGGAAAACTGAAGGGTAATGCTGGTGAGAAGTTGAAGCAGGATGAGGACGAGCATCTAGAGCCCAACTCTGAATCCCAGACTCCCCTCTCCATACACAGTCCCGCCACTGCTACGACTGCAAAGACCGTCTCTGTTTGTGCCTCACTTTTCAAGACTTTGCTTCTGAAACTTTCGGGAGAGTCACGTCCAGCACTGTGTTCGGCTGCACGTTCTACCTGTGAAGAGCAGGTGACGCTGCGTCAGAAGAGACGTTTGGCACAGTTCCTGCCACAACCTTCTGTCAGTAATACACATTATAATGTTAGCTCTTTATCACAAGACATTTTAATTAATGTTGAAACAACAGAGCTGTCAAACAGACCACAGTAAGTGACTGAAGTGAAGAGTCATGTGATGAAGGACATGAACCTCTGTGGTCCGCTTGATTTTTAACTTGCTCTTTGATTCAGGTCAAATTGACACTGTACTTTAGTTACAGGTACACAATTATGATGTTAAACTTAAATGAAAATCTGATGTGTAATAATTCAAGATCCCAAAGCAAGCATGTTGAAGTAAAATTGTGAGTTCAGTTTCCATTTGTACATGTTGAGTTTCTTCAACTTTGATGCACTTTACAAATGAAAGAGATTTAATGTGATAATCAGCTGCACTTCTGTGTTTTCTCTCTATGAAATGTTAAATTAACAGAATGTAATATTTGTATTTGTAAATGAGAATTTGAAATAAA

Function

NR:

description
hypothetical protein cypCar_00035721, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_02630198_02636420.mRNA True 1323 mRNA 0.46 3 2629837 2636428

Neighbor

gene id symbol gene type direction distance location
CI01000112_02425312_02445848 NA coding downstream 183989 2425062 ~ 2445848 (-)
CI01000112_02412957_02416960 STRA13 coding downstream 212877 2412937 ~ 2417013 (-)
CI01000112_02324515_02338662 NOTUM1A, NOTUM coding downstream 290748 2324389 ~ 2339089 (-)
CI01000112_02317589_02318500 MYADML2 coding downstream 310952 2317504 ~ 2318885 (-)
CI01000112_02308544_02314940 PYCR2, PYCR1, PYCR1A coding downstream 314897 2308118 ~ 2314940 (-)
CI01000112_02732722_02733132 NA coding upstream 96152 2732580 ~ 2734440 (-)
CI01000112_02830996_02831270 NA coding upstream 193416 2829844 ~ 2831270 (-)
CI01000112_02835153_02836999 NA coding upstream 198475 2834903 ~ 2838073 (-)
CI01000112_02858213_02875740 NA coding upstream 221657 2858085 ~ 2875740 (-)
CI01000112_02887084_02894055 FSCN2B, FSCN2, FSCN2A coding upstream 250246 2886674 ~ 2894589 (-)
G329762 NA non-coding downstream 17033 2612560 ~ 2612804 (-)
G329720 NA non-coding downstream 54288 2471679 ~ 2575549 (-)
G329730 NA non-coding downstream 91358 2482404 ~ 2538479 (-)
G329723 NA non-coding downstream 167495 2454543 ~ 2462342 (-)
G329911 NA non-coding upstream 23478 2659906 ~ 2729725 (-)
G329916 NA non-coding upstream 26482 2662910 ~ 2711235 (-)
G329928 NA non-coding upstream 111786 2748214 ~ 2755106 (-)
G329956 NA non-coding upstream 127979 2764407 ~ 2764681 (-)
G330029 NA non-coding upstream 144484 2780912 ~ 2781137 (-)
G329672 NA other downstream 610384 2016704 ~ 2019453 (-)
G329569 NA other downstream 631978 1991666 ~ 1997859 (-)
G329559 NA other downstream 820098 1791084 ~ 1809739 (-)
G329587 NA other downstream 996515 1629776 ~ 1633322 (-)
G328642 NA other downstream 1342879 1286655 ~ 1286958 (-)
CI01000112_03068505_03072256 NA other upstream 430892 3067320 ~ 3072879 (-)
CI01000112_03506254_03517454 NA other upstream 868027 3504455 ~ 3518742 (-)
G330301 NA other upstream 1123371 3758244 ~ 3773774 (-)

Expression


Co-expression Network