CI01000112_02835153_02836999


Basic Information

Item Value
gene id CI01000112_02835153_02836999
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2834903 ~ 2838073 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_02835153_02836999.mRNA
ACTGCCTTCTGCTGTCTTCCTTTACTCACTGTCTGTCTGTTACACAAAGACATCCTAAAGACATTTCTCTCACATAAAGCAGACAACCCTAACCGTCACTTGTGAAGTTGTTAATGTCATTACTCTGTTTGTGCTGCAGAAATGAAAACATACAGCTGACTTTGTATTTTAGGAGTGGTGTCTCTCGCAAGGAGATCGTCTTTGACTTTCATTTAGCATTAGCTTCATATGAAACTTTGCATGTGTTCATTACTGTCCTCTCCATTACTGTCATCCTTTCTGATGGTCACTTCCTCACTGAAAATAAGCGTACTTGGTATTTTTGTCTTGTTTTACAGCACATTTACTAAAGAAGCAAAATTATTTAAAATATAAAGTCTTGTTCTCTGAAAAACGTATCAAAATGTATTGAATTTATGGTTAAAAATAGCTGCCACTAAGCTAAGAAAAAATTTCATTTTAATTCAAAGGGAAAACAAATTTATTTTTCTACCCTATTGTCAGATTATTATTTTTTTCAGCAAAAACATACTTATCCAGAAAACAACACTTAATATCATAAGATTTAAGAATGTGTACTGGAAAAAGAAATTGTGTGCATTTTTTCACCTGTTGAAATGAGGAACAATCTCTCTCCTGACAAAAACAACTACAGCAGGTTAACAAAAGCTCTACACTATATATAATATAGGCCATTATATACAGATTAATGTATTTACACTAGAAGGAAAATGAGAAACGAGCTCGTCTCTGAGGTGAGAGAATGAACCACAGTGAGTGATCGCAGCTGAAACTGAGGAGAGAGAATCGTGTGAATTCAGTGTTCAGAGGATCTGCTCTCACTCCAGATACAGCTGTGCAGGAGAGATGATGCCGAGGAAAATCCCAGAGTTTTTTCATCCAGCATGTGCTGAGAGCTGATTCTTCCTTCACCCTGGACACAACTGGAGTAATAAAGACAGAATGATGTGCTTTAATGTGTTTGAACGAAACTCTCCGGGCTTCAGAGGAACTGAATGGCAGTAACAGGCGCTCAAATTCAATGAATCATAAGAGGGATTTGATCTGATGAAAATGAACTTTGGGACAGTTGTCATCAGTGCAGGTCTGTGCGGGCTGCTCAGCTTCATCCTGCTCGCCGTGTCCATCGCCACTGATTACTGGTACATTATAGATGTGGATGAAGGGAAGAACTCCAGCCTGGAATACAGCAGCTCCCACTCCGGACTCTGGAGGATTTATGAAGAAGGAGAGAACGGCAGTTATCATGACATCTCGTTCTACACGGACACCTCCGACCACACGGAGCAGGAGAAGCACCTTTTAAACTTGCACAGGGTCATAGTGGTCCTGCTGCCGCTCAGCCTGGTGCTGCTGGTGTTTGGGGGCATCTTCGGTCTGGTGGCGTCTTTGGCTCAGAGCTGCACTCTCCTCACCTGCATCGCTGCTTACTTCCTCATCTGCAGTGAGTGTCATTAACAGCTACATCAGACATCGACAGATAGCAGCTGAAATGGCATGAGGTCTCAGTGGAGTTTGTGTTGTTGTGTGCAGGTCAGTGAGAGATGTGTTTCGGGGCTCAGTCAATGCCACACATGGATATAAATCACAATGGGAAAGAAAGAAAACACAAAATGTCAGGTGCTCCAGCTGAGTGCAGCTGTTAGGAGAACTGGACACACACAGAGAGGGTTTAAATAGATGTGGAGGTTTTTAGCTCAATAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_02835153_02836999.mRNA True 1729 mRNA 0.42 3 2834903 2838073

Neighbor

gene id symbol gene type direction distance location
CI01000112_02830996_02831270 NA coding downstream 3633 2829844 ~ 2831270 (-)
CI01000112_02732722_02733132 NA coding downstream 100463 2732580 ~ 2734440 (-)
CI01000112_02630198_02636420 NA coding downstream 198475 2629837 ~ 2636428 (-)
CI01000112_02425312_02445848 NA coding downstream 389055 2425062 ~ 2445848 (-)
CI01000112_02412957_02416960 STRA13 coding downstream 417943 2412937 ~ 2417013 (-)
CI01000112_02858213_02875740 NA coding upstream 20012 2858085 ~ 2875740 (-)
CI01000112_02887084_02894055 FSCN2B, FSCN2, FSCN2A coding upstream 48601 2886674 ~ 2894589 (-)
CI01000112_02930571_02969824 BAHCC1 coding upstream 92376 2930449 ~ 2969824 (-)
CI01000112_03068505_03072256 NA coding upstream 230172 3067320 ~ 3072879 (-)
CI01000112_03095649_03099316 OTOP2 coding upstream 257049 3095122 ~ 3099316 (-)
G330050 NA non-coding downstream 14772 2819912 ~ 2820131 (-)
G330029 NA non-coding downstream 53766 2780912 ~ 2781137 (-)
G329956 NA non-coding downstream 70222 2764407 ~ 2764681 (-)
G329928 NA non-coding downstream 79797 2748214 ~ 2755106 (-)
G329916 NA non-coding downstream 123668 2662910 ~ 2711235 (-)
G330013 NA non-coding upstream 7632 2845705 ~ 2852394 (-)
G330063 NA non-coding upstream 56984 2895057 ~ 2895482 (-)
G330000 NA non-coding upstream 165715 3003788 ~ 3005219 (-)
G330082 NA non-coding upstream 240313 3078386 ~ 3082355 (-)
G330081 NA non-coding upstream 247120 3085193 ~ 3087086 (-)
G329672 NA other downstream 815450 2016704 ~ 2019453 (-)
G329569 NA other downstream 837044 1991666 ~ 1997859 (-)
G329559 NA other downstream 1025164 1791084 ~ 1809739 (-)
G329587 NA other downstream 1201581 1629776 ~ 1633322 (-)
G328642 NA other downstream 1547945 1286655 ~ 1286958 (-)
CI01000112_03506254_03517454 NA other upstream 666382 3504455 ~ 3518742 (-)
G330301 NA other upstream 921726 3758244 ~ 3773774 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025805 NA coding NC_007114.7 CM002887.2 57268363 ~ 57323496 (+)