CI01000112_03506254_03517454


Basic Information

Item Value
gene id CI01000112_03506254_03517454
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 3504455 ~ 3518742 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_03506254_03517454.mRNA
AGTATGTAGCCCAAATGTAGCTGAGGGAAGCTGGATATAAACGGCAGTAAACGGCAGCGTATTCAACTGTCCCACTGAATCAGAGCTTGGCAGGCAGGTGCGACTGTGATGTTTGTGTGATGATACACGTCTGTGCCTCTGACGTGTCAGATTATCAAACATCCAGATGCAGTGCACATGACGGAAGGACATCACTCCGCTCTCATCGATTATCCCGCCCTGTCAACTTCCTGTCACACTCAATCCCACGCCACCACTCACTTCATCTTACTACCATCCTCCAACCGCTCTGACCAATCCAAGCACACCTGCGCTGATGGAGGAGGAGATGAAGAAATTACGGTCGAGGACATATTCAGTCAAGTTAAGTCAGTCCACAGATTCTCCATTACGACACACTGTGGCTGTGCCAACTGCATGTGCCAGTTTTTTCAAAGTAACTGGGCAATACGTCTGCTCAGCCACAAGAGTTCAAGCACTACAAGTGATGTCATTCTTGAGTTTGGGACAGTTCGCTCTGCAAGGATCTGCGCTCTACAAGAATGGCTGCTTTCTGAAACTTTGAGCACATTTAGAGACAGAGAAGACTATCACAAATTATGTTACAAGCATCATATCAGGTGTGGCGTCTCCTTCCATCTCATGCCAAATAATCAGTCTGTTAAGAACAAAGGAGATCAGCAGCCCAGCGGTAAAGAGTCCGCTCGTGTTATAGGTGCGCTGCTAGGTGTATATCTTTCATCTAGTTCACCTCATCCCTTGAGCAATCTTAATATCAAAGCTGATTATCCATGTTGGCACAGCCACCTTTGCTTGGCCGAGACATTCAGTCTAATAGAGGCAACGTACTGGCATCTCTTGGCGCACAGAGATCACGTCTCACGTGTTGGGGCAGACAACCAGACGACCAACCCTTTGCCAGAGGGACGTTTAATAAGACTTCAAGAGCAATTACGAGAGGGTGCTATTCCAGCCGTCTCTATCTCATTGCTTTCCCTCAGAGACAGAGTCGTTACCAGAGAACACAAAGAGAAGGGGCATTTTTGGATCATCCCCCTGTGGTCCCCCTCAGTTGAAAGACTGAATTTGCTGGTGCTGCTCCAAGAACAGATGTTGTACTTAGTAACTGGACTATTTCTAAGATAATAACCACCAAATAACCAAAAATACAGCCACATTCTCACTCTCTCTCTCTCTGGTTTATCAGGCATTGACTCTGAATTATGCTCAAGTTGCTTCTAAGCTTCCACAGCTTCATTTCTCCACATATTGTACACCCACACACAGATACGGACTGTCCTTATGTGTTCTATAAGAGAGAGACGATTATCATGCAGCTGTGTGGCATCTCCATCCCTCGGTGACACAAATGCAGCTGAAAACGTGCTGTGAAGATGATAGATTCACACCTGCGTATATCGGCTGAGCTCCACATATCTGTACCCGTGACATCTGGTATGCAGGACTAATGAATTCCCCATGTGGTCTTGACAACAAACACACTAGTCTCCTGCTTTTATTTGCCTCATCGTCCCCAAGATGGTATTTAAATGTTACCATGGCCAACGGATGTTTTCCAGCAGGTTTTTGGTAGTATGACCTGTTGGAGACTAATATGTTGTGTTCACATGTTGCAGATGGATAATTGGAAAGCATTTGCATGTGTGTCGAATTGCAACAGCATCTGCAGTGTTAAAACCCTTCCATATTGCAGTATTATTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_03506254_03517454.mRNA False 1728 mRNA 0.46 4 3505672 3517631

Neighbor

gene id symbol gene type direction distance location
CI01000112_03393172_03448154 PRKCA coding downstream 57518 3391852 ~ 3448154 (-)
CI01000112_03367247_03384263 CACNG5B, CACNG5, CACNG5A coding downstream 119788 3366873 ~ 3385884 (-)
CI01000112_03291919_03299963 RAC3B, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC1.L coding downstream 205709 3291241 ~ 3299963 (-)
CI01000112_03205596_03209747 NA coding downstream 295726 3205434 ~ 3209946 (-)
CI01000112_03167204_03177153 NA coding downstream 328519 3167026 ~ 3177153 (-)
CI01000112_03569282_03569449 NA coding upstream 51486 3569117 ~ 3569783 (-)
CI01000112_04031927_04033721 NA coding upstream 514209 4031840 ~ 4033830 (-)
CI01000112_04095809_04175244 NA coding upstream 577649 4095280 ~ 4175284 (-)
CI01000112_04190915_04191720 NA coding upstream 673093 4190724 ~ 4191720 (-)
CI01000112_04249185_04251352 GPRC5BA, GPRC5B coding upstream 731523 4249154 ~ 4251394 (-)
G330020 NA non-coding downstream 2364 3487307 ~ 3503308 (-)
G330012 NA non-coding downstream 19896 3469925 ~ 3485776 (-)
G330170 NA non-coding downstream 141004 3364385 ~ 3364668 (-)
G329975 NA non-coding downstream 230671 3272540 ~ 3275001 (-)
G330127 NA non-coding downstream 247609 3208491 ~ 3258063 (-)
G330002 NA non-coding upstream 24651 3542282 ~ 3556118 (-)
G330010 NA non-coding upstream 42543 3560174 ~ 3851625 (-)
G330279 NA non-coding upstream 193908 3711539 ~ 3712031 (-)
G330301 NA non-coding upstream 240613 3758244 ~ 3773774 (-)
G329985 NA non-coding upstream 260731 3778362 ~ 3860190 (-)
CI01000112_03068505_03072256 NA other downstream 432942 3067320 ~ 3072879 (-)
G329672 NA other downstream 1486219 2016704 ~ 2019453 (-)
G329569 NA other downstream 1507813 1991666 ~ 1997859 (-)
G329559 NA other downstream 1695933 1791084 ~ 1809739 (-)
G329587 NA other downstream 1872350 1629776 ~ 1633322 (-)
G329964 NA non-coding downstream 240570 3193311 ~ 3263885 (-)

Expression


Co-expression Network