CI01000112_04918167_04937803


Basic Information

Item Value
gene id CI01000112_04918167_04937803
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 4917981 ~ 4938884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_04918167_04937803.mRNA
AGATAAAGACCCCAAGGGTGGAAGTGCTTGGTCTAACAGAAACAGACAAACTCCAGGGTGCTGAAAACAGTCTGAGGTTTGCCAGGGCTCTTGTTCTGAGTGCAGTCGCTGTTATCTAGCAACAGTCCACTGCGAAACAGTACAGGAAATCTCTGATTGTTGATTTCTGGTGCATGCACTGATGGAATGACAGCTTCAAAAGGCACTATGAAAGAAAAACCACGCTGTCTGGCTCTTCTTCATCTCAGGAGGCCGGAAGGAAGCAGAGGTCAACAGCAGGAGGAATCATCTGCTGATCATCTGGGATGCAAAATTGCCGGGCCCCTGTTTTCCCCTGCTTTTGAAACATTTCTGCAACAGAACACAAATGTCAAGAGACCAAGGAGGATGTTTTCCATCAGCTGGGACCCAAATATTGTAATATACATGAAGATCTCAGCAAAACAGTGTTTCTTTCTTTTCAAAGTAACAGCACAGAGAAATCTCCAGGATAATGCACAACAAGTTGCGCCGCTATTAGAGGAATCAAGCGAGTTCCCCATAGAGTTCAGAAGGCCCTGCCACGCACCAGTTAATCTAATAAAAAAAAAATATAGCTATCGAACAGCCAATCAGAAAATAGAATTGCTGTATCTGGATGTAGTTAGCTACAGAAGAGGACATCTGTCAGTCACATTGATTCACATCTGGCTACAGACTGATCGTGATCGACGTGGGACCATATCCTATGAGTACAGGAAGAGGCAAATGAGCATTCTTTCATGCTTCGCTCTGAAGGATCAGCTCCCTAAAAAGGTAGCCAGGTCAGAGGAGGAGACTGTGGAGAAGACAGTAGTGGAGGCAGTAGATGAGTCAGTGGAGGACACTGTGGAGGAGACAGCTAGGGTGTCAGTAGAGGATGAGTCCGTGGAAGAGACTGTGGAGGACACCATAGAGGAGACAGTGCAGAACCCACTGGAAACAGGGAAAAAGAGAGGATTAAGTGGAGCAGCCACCTATAGGTGTTTCTTTAAGAAGGAGTGGTCAACCCGATGGCCATTCATCACAATGGGAACCACCAGCTCCTTCTACTGCAATGCTGCCAATGTTCTCCACACTGAACCTCCTCCTCCAGAGAGAAAGGTCTTCCATCTTCCAGCTCCATGGAGAGATGACAAAGTTCATCATGAAACTGTGTGCGAGGTTCATGATGCCGTTAGCACTACAGGGCCGACAAGTCCAGGACATCCCCTACAAGGACCCAGTAAACCAACTGCCAGGAGAAAAACCACCAGAGCTACCCTCAACAGGCTCCTTGAGACTGGACACATCACACCTCAGGAGGTGCAACTATTTCAGCAGGCAGCACTGGCGTTTCTGTTCAGGCCTGTGGAGTATGGGATGAACAAACTCCCCCTGAAGGAGGCCCTTCTGAAGCATGCCAAATTCGTTGACGTGCAACAGAGGACTGAGTGTGGGGTGGAAGATGCTCTATACTTTGTAGACAGGCAAGGGTTTCACATTTTTCAGGATTTCAACATATTGAATACTTTAAGTTTAATTTTGATCATGGTCACAAAACAAATCCTTAATCAGTTCTTTACACATGGTGCTTTTTTTAGATTCCAGGAACTACTTCCTTTCCATGGGCCAGAGGAACAGGACAAGGTGAGTGAGGAGTACCTGGAGTATCAGCTCATGGATATCCCCATGCCCCAAGATCCCACCACCTTTAATGTTGAGGAGTTTTGGGGGAGTATGTCCTCAATCAAGAGCAAGGTGACCGGTTTGAGCCAGTTTAGGAGGCTTTCGAAAATAGCTGCATTAGTGTTAGTGCTCCCTCATTCAAATGCAGACGCTGAGAGGGTTTTCTCCATGGTTAGACTAAATAAAACCAAAACCAGGAACAGCTTGGCCCTAGATGGAGCTCTGTCATCCATCATGACAGTGAAAATGACTGGCCTGGTACCATGTTTCAAATGGGAGCCACCAACCCCTGTGCTGAAGGCCTCAAAACCTGCTACCAACACCTACAATACACAACACTAACCATTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACGTACACACTAAAATGCTGAATTAAATAAATATTTTTTTATTTGTACGAATTTGTGTCATTTTTCATATCAGACCCCCGTCCCCACCCAAACCCCCGTCGCTGCCGCCGCCGCCGAAATCTCACTCGGAACTCAGTTCAAAACTTGAGAGCCCTGACACCGTGTCCTAAAAGGTATATAAAAGCTTTTAGAGCAACATATGCTCCCTCTCCAGATGAATTCTATTTCAGGGAAGGCCTTGTTTCATCAGGACAATGCAAAACCACATACTGCTGCTATTACAACAGCATGGCTTCGTCGTAGAAGAGTCCTGGTGCTGAATTGGCCTGCCTGCAGTCCGGACCTTTCACCTATAGAGAACATTTGGCGCATCAATAAATGAAAAATACGTCAAAGACGACCACAAACTCTTCAGCAGCTGGAAACCTATATCAGGCAAGAATGGGACCAAATTCCAACACCAAAACTCCAGAAAATCCAGCGTTAGCGTCAGTTCTGGCAGGTCACGTCAGTCAAGCTCGCATCAGCTGACTCCCAGGTATAGGAATACGACGCCTATCACGGCATCCATATATAAGCTCCTCAGTATTATTAGCAGCTATTGCATTCTCAGGAGCTAATTACCCTCTTCCATCCCCAGCTCCTCCTCTCTTCAGTCAGGAATGGCCTTATGATTCCGGAACTCATAACCTCGACGCCTAGACATCTTTACACTGTTTTGAAAAGAAGAGGAGATGCTACACCATGGTAAACATGCTCCTGTCCAAACTATTTTTCCAATCATTTAGTGCTCTTAAACTCCTACACTTTTGAGTGCCACGCCCACATCTCAACATCTAATCAAAAACTGAGGTATTGAACCAAGACCTGCCCTATGTATTTTCTTTTTCATTATTGTTACATTCAGATGTGCGTCACAATACAGAAGAAAAGATCTGTCACTACTTCCAGTTCATTATTTAGTTAAAGATGTTTGATGAAAAAAATATTTAGCTTCAGGCTAAACATTTTCTGA

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_04918167_04937803.mRNA True 3109 mRNA 0.45 10 4917981 4938884

Neighbor

gene id symbol gene type direction distance location
CI01000112_04579149_04582002 NA coding upstream 335817 4579149 ~ 4582164 (+)
CI01000112_04561557_04563086 NA coding upstream 354791 4561455 ~ 4563190 (+)
CI01000112_04346478_04353682 NA coding upstream 563682 4345703 ~ 4354299 (+)
CI01000112_04264297_04265684 NA coding upstream 652009 4263713 ~ 4265972 (+)
CI01000112_04055598_04089942 NA coding upstream 827445 4055598 ~ 4090536 (+)
CI01000112_05076817_05101845 NA coding downstream 137933 5076817 ~ 5101845 (+)
CI01000112_05102672_05120797 NA coding downstream 163788 5102672 ~ 5120871 (+)
CI01000112_05163850_05164401 NA coding downstream 224966 5163850 ~ 5164530 (+)
CI01000112_05172320_05174322 NA coding downstream 233304 5172188 ~ 5174477 (+)
CI01000112_05204626_05208453 NA coding downstream 265742 5204626 ~ 5208867 (+)
G330710 NA non-coding upstream 57584 4859702 ~ 4860397 (+)
G330704 NA non-coding upstream 66643 4850869 ~ 4851338 (+)
G330598 NA non-coding upstream 72726 4805252 ~ 4845255 (+)
G330608 NA non-coding upstream 101799 4750519 ~ 4816182 (+)
G330616 NA non-coding upstream 196289 4721400 ~ 4721692 (+)
G330729 NA non-coding downstream 13202 4952086 ~ 4953009 (+)
G330731 NA non-coding downstream 20822 4959706 ~ 4960119 (+)
G330773 NA non-coding downstream 85307 5024191 ~ 5024540 (+)
G330783 NA non-coding downstream 119416 5058300 ~ 5058573 (+)
G330786 NA non-coding downstream 124202 5063086 ~ 5063291 (+)
G329194 NA other upstream 1986092 2920254 ~ 2931889 (+)
G329125 NA other upstream 2299830 2617704 ~ 2618151 (+)
G328456 NA other upstream 3684863 1232022 ~ 1233118 (+)

Expression


Co-expression Network