G327770


Basic Information

Item Value
gene id G327770
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 96711 ~ 96943 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU372558
CGGGAACAAACATACACGCACAACTCCGTTGCTGACCCGGAAAAACAAACTTCATATACTGTTCCCTTAACGCTGGGTTCTTTGGGAAGCTGAAAAAGGTAATCTTTCCTTCACAACCAAAAACACACTCCTTTGGTGACAGGAGCTGCGTCTCATTTCGGAGGCTGCGTCCTCCGGAGGTTAGCTGCATACATCATCAAGGATGTCTTATTTAAGAAAAGTAACAGTAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU372558 True 233 lncRNA 0.44 1 96711 96943

Neighbor

gene id symbol gene type direction distance location
CI01000112_00071976_00072854 NA coding upstream 23595 71976 ~ 73116 (+)
CI01000112_00059545_00061349 NA coding upstream 34975 59099 ~ 61736 (+)
CI01000112_00220804_00222613 NA coding downstream 123721 220664 ~ 222659 (+)
CI01000112_00379383_00617969 RPTOR coding downstream 282440 379383 ~ 617969 (+)
CI01000112_00627027_00637276 NA coding downstream 530084 627027 ~ 637276 (+)
CI01000112_00655682_00669456 P4HB coding downstream 557836 654779 ~ 669948 (+)
CI01000112_00672164_00673174 PPP1R27, PPP1R27B coding downstream 574996 671939 ~ 673882 (+)
G327669 NA non-coding upstream 11241 18047 ~ 85470 (+)
G327670 NA non-coding upstream 26838 17420 ~ 69873 (+)
G327668 NA non-coding upstream 80065 16104 ~ 16646 (+)
G327771 NA non-coding downstream 86 97029 ~ 97539 (+)
G327772 NA non-coding downstream 602 97545 ~ 98151 (+)
G327776 NA non-coding downstream 4296 101239 ~ 101564 (+)
G327777 NA non-coding downstream 4779 101722 ~ 101956 (+)
G327779 NA non-coding downstream 9888 106831 ~ 108047 (+)
G328456 NA other downstream 1135079 1232022 ~ 1233118 (+)
G329125 NA other downstream 2520761 2617704 ~ 2618151 (+)
G329194 NA other downstream 2823311 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 4987777 5076817 ~ 5101845 (+)

Expression


Co-expression Network