G327779


Basic Information

Item Value
gene id G327779
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 106831 ~ 108047 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU372567
TGCCTCTCCTCACCTCAACTATCTATAACTCACCTCAACTATCTATAACCTGTTTCTGATAGATAGATAGATAAATAAATAAATACTATCAATAAGATTTTTAAAAATCACATGCACACCACGTGTAATATGTAGTAAATGTAAGCATACGTGTAAGCATTTGCTGTTTAGAATGAATTCAAACAGTAGGCCAACAGTAAATGTCAAAATTGTATTTACTTTTTCATGGACTGCGCTTTAATGCAGTAATATCCCGCATTTCTTTTTAAAAATATTTCTTAATAGGCCTATGTATTAAGTTATTTTCTTCTTGTAATAAAATTAAAAAATAGAAATAAGAATTATATAGGCTACACATAAAACACATTTGTGATAGTGTAGTTTTCCCTAATAGGCTACATGAATGAGTAGGCTTTGCATGCGCCTTTTAACAGCAGTGAAAATAGTATATAGTGGATAACGCTACGATACATGGCACAACTGTGCTGTAAGACATGGGTGTCCAACCCTGCTGTAAGAGAACCGAGTTCGAGGCCTGGCTCGGGATAGCCTTTTCAAGCCAACATATTTCGTTTGAAATGTACATTTATTGATCTGAAAACAATCTTTGTTATTAATGTTCTTTAATTTTTATTGTTTATTTTTAATTGATAGTGATAACAACATTGTAAATATTTGCTCTTAACTGATGTTGGGTGACAGTCTTTGTTTTACCATTCTTGATGCTTAAGAAATAGCAGATTGGTCAAGCGTTTGGTTTTGTGAATCACTCATGAAACTGAGATGACTGACAATGATAACCAATGGATAAATGATAAGCAACAGAAGAAAAACAACAAATTTCAAAACAGATTTATATCAGACAAATCAGTGTTGGCTGAATATGTTTATTAGCTTAAAAAGACTTGAAACATTTTTGTTGACTAAATGACTAAAAGAAAAAAAATAGCCTACTAATAGGCTAAATAGTAGCCTATTGCTTTATTTTCAAGGTAAAGACTCGGGACAGTAGCCTATTTATTTATTACAGGTGTTTATTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU372567 True 1041 lncRNA 0.32 2 106831 108047

Neighbor

gene id symbol gene type direction distance location
CI01000112_00071976_00072854 NA coding upstream 33715 71976 ~ 73116 (+)
CI01000112_00059545_00061349 NA coding upstream 45095 59099 ~ 61736 (+)
CI01000112_00220804_00222613 NA coding downstream 112617 220664 ~ 222659 (+)
CI01000112_00379383_00617969 RPTOR coding downstream 271336 379383 ~ 617969 (+)
CI01000112_00627027_00637276 NA coding downstream 518980 627027 ~ 637276 (+)
CI01000112_00655682_00669456 P4HB coding downstream 546732 654779 ~ 669948 (+)
CI01000112_00672164_00673174 PPP1R27, PPP1R27B coding downstream 563892 671939 ~ 673882 (+)
G327777 NA non-coding upstream 4875 101722 ~ 101956 (+)
G327776 NA non-coding upstream 5267 101239 ~ 101564 (+)
G327772 NA non-coding upstream 8680 97545 ~ 98151 (+)
G327771 NA non-coding upstream 9292 97029 ~ 97539 (+)
G327770 NA non-coding upstream 9888 96711 ~ 96943 (+)
G327700 NA non-coding downstream 187086 295133 ~ 298844 (+)
G327866 NA non-coding downstream 204588 312635 ~ 313108 (+)
G327868 NA non-coding downstream 211222 319269 ~ 319523 (+)
G327876 NA non-coding downstream 234618 342665 ~ 342972 (+)
G327708 NA non-coding downstream 357637 465684 ~ 473895 (+)
G328456 NA other downstream 1123975 1232022 ~ 1233118 (+)
G329125 NA other downstream 2509657 2617704 ~ 2618151 (+)
G329194 NA other downstream 2812207 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 4976673 5076817 ~ 5101845 (+)

Expression


Co-expression Network