G327868


Basic Information

Item Value
gene id G327868
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 319269 ~ 319523 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU372660
TTTCTCACAACTATAAACACAATCTTGTAACTATACACCAACTTGTACAAACATCAAACTTCCACGTCAAAATCAAATATTTCAGTCAAAAACTTATTCACTTCTGTCAAAATCAAACTTTGGCCTCAGATGACACACAAAACCTGCAAATACACAGACTACTTTCCTGCCCAGTGAACACTAGTGTGATCAATTCATAACACTATAACAAAAATACCTCTTATTGGTATTCAAGAATAATTTGGCAGCTCAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU372660 True 255 lncRNA 0.34 1 319269 319523

Neighbor

gene id symbol gene type direction distance location
CI01000112_00220804_00222613 NA coding upstream 96610 220664 ~ 222659 (+)
CI01000112_00071976_00072854 NA coding upstream 246153 71976 ~ 73116 (+)
CI01000112_00059545_00061349 NA coding upstream 257533 59099 ~ 61736 (+)
CI01000112_00379383_00617969 RPTOR coding downstream 59860 379383 ~ 617969 (+)
CI01000112_00627027_00637276 NA coding downstream 307504 627027 ~ 637276 (+)
CI01000112_00655682_00669456 P4HB coding downstream 335256 654779 ~ 669948 (+)
CI01000112_00672164_00673174 PPP1R27, PPP1R27B coding downstream 352416 671939 ~ 673882 (+)
CI01000112_00704149_00718204 CCDC40 coding downstream 384626 704149 ~ 718231 (+)
G327866 NA non-coding upstream 6161 312635 ~ 313108 (+)
G327700 NA non-coding upstream 20425 295133 ~ 298844 (+)
G327779 NA non-coding upstream 211222 106831 ~ 108047 (+)
G327777 NA non-coding upstream 217313 101722 ~ 101956 (+)
G327776 NA non-coding upstream 217705 101239 ~ 101564 (+)
G327876 NA non-coding downstream 23142 342665 ~ 342972 (+)
G327708 NA non-coding downstream 146161 465684 ~ 473895 (+)
G327892 NA non-coding downstream 359248 678771 ~ 678990 (+)
G327893 NA non-coding downstream 359709 679232 ~ 679470 (+)
G327894 NA non-coding downstream 359961 679484 ~ 679725 (+)
G328456 NA other downstream 912499 1232022 ~ 1233118 (+)
G329125 NA other downstream 2298181 2617704 ~ 2618151 (+)
G329194 NA other downstream 2600731 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 4765197 5076817 ~ 5101845 (+)

Expression


Co-expression Network