XLOC_011224 (smc6)


Basic Information

Item Value
gene id XLOC_011224
gene name smc6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 6667441 ~ 6746046 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022412
ctgaCTGTAGTTTACACTTAATGGGTGGGGTTTGCATATGCGCGCTGCCTGTTCACCAGGAAGTCGTCAAAACATTTTGCGTTTACTTTCCATATGCAGGGGAATGGAGTAAGTACACCAGTCATACTCGTACTTAATTTAACGCCGTTTATGCTCTATTTACTCGTGATCCTCATTCCAGAGCCATTTTATCTCATTTATTAAAGGCTGTTCACCTGTTCCTTCATGTCAGTTGACGGTAACGTTAGTTGTTCGCTAGTCTAACGTTATCTATTGTTCCTCTTTGTGTTTCTGCATCTGTCGTTGCTTCAGTggcttttttaaagtaatttctgACGTTAAATATAAACATCTGAGCTTTAATTTTCGTGTTTTATCAGTTACTGGCCGAGTTAAGTAGTGAAATTGTGTTTGACAGACTTTGGATGCGTGATGTTATGCTTTTAGCTCGTAATACTGTGTCTTTTCCCTCAAGTTTGGACATCTCTCTGCCATGAATAAGAGGAAATCTGGTGTTCACAATGCTGTAAAACCATCGAAGACCCCTCGGACTGATGGTAAAACTCATGTGTTGGAGGAGGAGGATGTTGATGAGGAGGATGGAGCCCTTCAAGATCATCTTTCTGCTTCGAATGTCGGAGATATCGGTGTGATAGAAAGTATAACTTTGAGGAACTTCATGAGCCACCATTTGCTTGGACCTTTAAAATTTGGAGCAAATGTCAACTTCATTGTTGGAAACAATGGAACTGGGAAAAGTGCCATTCTGACAGCTCTTATAGTGGGTCTCGGTGGAAAAGCAACTACAACTAATAGAGGAACGTCTTTGAAAGGTTTTGTGAAATATGGAGAGACTTCTACAGACattaaagtgaaattaaaaaacCGAGGAAATGACCCCTATAAAGGGGATGTTTATGGAGACAGCATCTGCATTGAACATCGGATCACAAGTGATGGATGCAGGACTTGTAAGATCAAGAATAAAGCAGGTAATTGCATCATTTCCTCTCTGGGTGACATCAGTAAGAAGACTTCCTTTCCagttcacacattcattcaatttgatttatttttagggCATGTGGTTTCCACTAAGAAGGAGGAGTTGACTGCAATACTGGACCATTTTGGAATCCAGGTTGACAATCCTGTGTCTGTCCTTAACCAAGAAATGAGTAAACAATTCCTGCATTCGAAAAGTGAAGCGGACAAATACAGGTTTTTCATGAAAGCTACTCTTCTGGAGCAAATGAAAAGAGACTACATTCACATCAAGCAGACTAAAGCCGTGACACGAGACCAGGTGGAAAGACAAGAGGAGTGTCTCAGAGATCTCAGGCAGTTATTCTTGCAGAGGAAAGAAAGATATGAGCGCATGTCGTCTCTGGATGATATGAGACAGACTCTGGAGGACCTGAAAAAGAAGATGGCGTGGTCTTTGgtgagagagaaagagagtcaaGTTGAACAGCTGAAGGAACAAATCGAAAAAGAAGATGCTGattgtaaacatgaagaaaaGCTGCAGCTCTGTCAGAACAAAGTTGCTGTTGCTGAGAAGAAACTGCAGGACAGCCAGAAACATCTGTGTACGCTTCGAGAGGAGCAGGAACATCTCACAGAGGAGAGCCGGAAAATGAAGGAGGAAATTAAAgtcaaaacaaaagcacagaaaAGCCAGGAGGTGGTTTACTTCCGCGCTGAGAATAAATTGAAACAGTTAAAAAAGGAGCAATGCCTTCTTCAGGAGAGAATTCACAAAATAAGTCATGGCAGCAGAAACCGCCAAGAGGCCGAGCACATGCagcatcttaaaaaaatatctgccTTGAAAAACCAGCTGGAAAAGCTTGAGACAGAGTCCAGAGCTCTGAATCAAGAGATTAAGGACAGACAACAAGCTCTACATAAAGGAAGAGAGGAATACGATAAACTCAGcATGGAGGAAAAGAACATAAAAGCCTCTCTGGAGTCCAAATCGAAGAGAAAAAAGCAGCTGATGGCCAGCAGATCTAACAGACTGAGGCGGTTTGGTGATCACATGCCAGAATTGATGGAGTCCATCAACAAAGCCTTCGCTCAGGGGCGATTCAAGAAGAAACCTGTGGGACCAATAGGTGCATGCATCAGTCTAAAAGATCCCACTTTAACCTTGGCTGTAGAGTGTTGCTTAGGATTTTTTTTGAAAAGCTTTTGCTGTGACAATTACAAGGATGAAAAAGTCCTTCAGGGATTGATGTCGCAGTATTTCTACAAAGGCAACAGGCCTCAGATAATGGTGTGTCCATTCACAGACCATGTTTATAATCTTCAAGGCCGTGGAGTCCATCATCCTGAGTTTCCATCAGTGCTGGACTGCCTTAATATCGAGAACCCGGTCATAGCAAACTGTCTTATTGACATGAGGAGCATTGAGAGCATTCTGGTCATCAGAGAAAAAGCTCGTGCCAGGAAGGTCATGCAGGGCTCAAGACCACCAAAGAATTGCCGCGAGGCCTTCACTGCAGATGGTGATCAGGTTTTCACCAATCGCTATTACACCCCTGAACATGAAGTTCTGGTCAAATATCTTGGTGGAGACCCAGAAGCAGAAATAAGTCTAGTGAAcggagagctggagaacattcagGCTCAGCTTTTACGCTTCCAGCTTCACTCCTGCTCTGTGAAGGAGGACATTCAGCTCATGGAGGAGAAATTGCGTAGTGTTATCATGGCCTGCAAAAAGAATCAGgAGAGTATAAATAAGGTTAAAGCTTCGATAACAGAACTTGAGAACATTGAGGAGGCGCAGGATGAGGACATCAGCTCTCTGGAGGAAGAGGCTCAAGAGAACGAGCAGAAGATCGAATTGGAGAAGAGAATCGTGAAAGAGGCTGAAGATGAACTCCGAAAACATGAGAAAGGGCTCTTGGCTGTCAATCAGAAATTCAAAGATGTGAAATGTAAAATGGAGAAACTGTCAGATGAGATGGAGCAGCTGAAGGAGGAGCAAGTGAAGGCAGAAACTGTTTGCAACAAACTTGATCAAACCATGAAGACCTTGGAGAAGAAACTCAAGGATCATCAGAACAACATTCAGAGCATGAAAGAAGATTTGTCCCTCCAAGAGGAAGACTTGCGGGATTGTGAAGCCAAAGCCCGAGAGCTGTGTCCTGAGCGCCAGCAGGTTGATCAGAGTCCCAGAAGCATTGATGTGGAGATCACACGCCTGCGACAGAAAATCAAAACGCAAGAGAACAGTCACGGCGATAAGGAGCAAATTATCCGGGAGTATGCGGAGGCTCACAGTAATTACAAAAGCAAATCCAGCCAGCTGAGGGACCTCAGGAAGTTTATCGACCGTCTCGACAACATCATGATTGACCGCCAGGACCGATACAAAACACTGCGAAAGTCGCTTTCTGTAAGGTGCAAGCTGTACTTCAACAACTTCATGATCCAGCTGCACTGCTGTGGCTCTATGATGTTTGACCACAACAATGAAACGCTGTCCATTTCTGTGAAGCCGCCTGGTCAGGAGATGAACAGCGTCAGTGACATGCGCTCTCTCTCGGGCGGTGAACGCTCCTTCTCCACCGTCTGCTTTATTCTGGCACTCTGGGAAATCACAGAGTCTCCTTTCCGCTGCCTGGACGAGTTTGATGTTTACATGGACATGCACAATCGCAGCATTTCAATGAACATGCTTGTGGCACTTTCCGAGCGTCAACATCTGCGGCAGTTCATCTTCATCACCCCTCAGTCTATCAGCCAACTTCCTAAAAGCACCAACATCACAATCCACCAGCTTCAGGATCCAGAGAAAGACACTGAGGAGGAGTGA
>TCONS_00022411
ctgaCTGTAGTTTACACTTAATGGGTGGGGTTTGCATATGCGCGCTGCCTGTTCACCAGGAAGTCGTCAAAACATTTTGCGTTTACTTTCCATATGCAGGGGAATGGAGTAAGTACACCAGTCATACTCGTACTTAATTTAACGCCGTTTATGCTCTATTTACTCGTGATCCTCATTCCAGAGCCATTTTATCTCATTTATTAAAGGCTGTTCACCTGTTCCTTCATGTCAGTTGACGGTAACGTTAGTTGTTCGCTAGTCTAACGTTATCTATTGTTCCTCTTTGTGTTTCTGCATCTGTCGTTGCTTCAGTggcttttttaaagtaatttctgACGTTAAATATAAACATCTGAGCTTTAATTTTCGTGTTTTATCAGTTACTGGCCGAGTTAAGTAGTGAAATTGTGTTTGACAGACTTTGGATGCGTGATGTTATGCTTTTAGCTCGTAATACTGTGTCTTTTCCCTCAAGTTTGGACATCTCTCTGCCATGAATAAGAGGAAATCTGGTGTTCACAATGCTGTAAAACCATCGAAGACCCCTCGGACTGATGGTAAAACTCATGTGTTGGAGGAGGAGGATGTTGATGAGGAGGATGGAGCCCTTCAAGATCATCTTTCTGCTTCGAATGTCGGAGATATCGGTGTGATAGAAAGTATAACTTTGAGGAACTTCATGAGCCACCATTTGCTTGGACCTTTAAAATTTGGAGCAAATGTCAACTTCATTGTTGGAAACAATGGAACTGGGAAAAGTGCCATTCTGACAGCTCTTATAGTGGGTCTCGGTGGAAAAGCAACTACAACTAATAGAGGAACGTCTTTGAAAGGTTTTGTGAAATATGGAGAGACTTCTACAGACattaaagtgaaattaaaaaacCGAGGAAATGACCCCTATAAAGGGGATGTTTATGGAGACAGCATCTGCATTGAACATCGGATCACAAGTGATGGATGCAGGACTTGTAAGATCAAGAATAAAGCAGggCATGTGGTTTCCACTAAGAAGGAGGAGTTGACTGCAATACTGGACCATTTTGGAATCCAGGTTGACAATCCTGTGTCTGTCCTTAACCAAGAAATGAGTAAACAATTCCTGCATTCGAAAAGTGAAGCGGACAAATACAGGTTTTTCATGAAAGCTACTCTTCTGGAGCAAATGAAAAGAGACTACATTCACATCAAGCAGACTAAAGCCGTGACACGAGACCAGGTGGAAAGACAAGAGGAGTGTCTCAGAGATCTCAGGCAGTTATTCTTGCAGAGGAAAGAAAGATATGAGCGCATGTCGTCTCTGGATGATATGAGACAGACTCTGGAGGACCTGAAAAAGAAGATGGCGTGGTCTTTGgtgagagagaaagagagtcaaGTTGAACAGCTGAAGGAACAAATCGAAAAAGAAGATGCTGattgtaaacatgaagaaaaGCTGCAGCTCTGTCAGAACAAAGTTGCTGTTGCTGAGAAGAAACTGCAGGACAGCCAGAAACATCTGTGTACGCTTCGAGAGGAGCAGGAACATCTCACAGAGGAGAGCCGGAAAATGAAGGAGGAAATTAAAgtcaaaacaaaagcacagaaaAGCCAGGAGGTGGTTTACTTCCGCGCTGAGAATAAATTGAAACAGTTAAAAAAGGAGCAATGCCTTCTTCAGGAGAGAATTCACAAAATAAGTCATGGCAGCAGAAACCGCCAAGAGGCCGAGCACATGCagcatcttaaaaaaatatctgccTTGAAAAACCAGCTGGAAAAGCTTGAGACAGAGTCCAGAGCTCTGAATCAAGAGATTAAGGACAGACAACAAGCTCTACATAAAGGAAGAGAGGAATACGATAAACTCAGcATGGAGGAAAAGAACATAAAAGCCTCTCTGGAGTCCAAATCGAAGAGAAAAAAGCAGCTGATGGCCAGCAGATCTAACAGACTGAGGCGGTTTGGTGATCACATGCCAGAATTGATGGAGTCCATCAACAAAGCCTTCGCTCAGGGGCGATTCAAGAAGAAACCTGTGGGACCAATAGGTGCATGCATCAGTCTAAAAGATCCCACTTTAACCTTGGCTGTAGAGTGTTGCTTAGGATTTTTTTTGAAAAGCTTTTGCTGTGACAATTACAAGGATGAAAAAGTCCTTCAGGGATTGATGTCGCAGTATTTCTACAAAGGCAACAGGCCTCAGATAATGGTGTGTCCATTCACAGACCATGTTTATAATCTTCAAGGCCGTGGAGTCCATCATCCTGAGTTTCCATCAGTGCTGGACTGCCTTAATATCGAGAACCCGGTCATAGCAAACTGTCTTATTGACATGAGGAGCATTGAGAGCATTCTGGTCATCAGAGAAAAAGCTCGTGCCAGGAAGGTCATGCAGGGCTCAAGACCACCAAAGAATTGCCGCGAGGCCTTCACTGCAGATGGTGATCAGGTTTTCACCAATCGCTATTACACCCCTGAACATGAAGTTCTGGTCAAATATCTTGGTGGAGACCCAGAAGCAGAAATAAGTCTAGTGAAcggagagctggagaacattcagGCTCAGCTTTTACGCTTCCAGCTTCACTCCTGCTCTGTGAAGGAGGACATTCAGCTCATGGAGGAGAAATTGCGTAGTGTTATCATGGCCTGCAAAAAGAATCAGgAGAGTATAAATAAGGTTAAAGCTTCGATAACAGAACTTGAGAACATTGAGGAGGCGCAGGATGAGGACATCAGCTCTCTGGAGGAAGAGGCTCAAGAGAACGAGCAGAAGATCGAATTGGAGAAGAGAATCGTGAAAGAGGCTGAAGATGAACTCCGAAAACATGAGAAAGGGCTCTTGGCTGTCAATCAGAAATTCAAAGATGTGAAATGTAAAATGGAGAAACTGTCAGATGAGATGGAGCAGCTGAAGGAGGAGCAAGTGAAGGCAGAAACTGTTTGCAACAAACTTGATCAAACCATGAAGACCTTGGAGAAGAAACTCAAGGATCATCAGAACAACATTCAGAGCATGAAAGAAGATTTGTCCCTCCAAGAGGAAGACTTGCGGGATTGTGAAGCCAAAGCCCGAGAGCTGTGTCCTGAGCGCCAGCAGGTTGATCAGAGTCCCAGAAGCATTGATGTGGAGATCACACGCCTGCGACAGAAAATCAAAACGCAAGAGAACAGTCACGGCGATAAGGAGCAAATTATCCGGGAGTATGCGGAGGCTCACAGTAATTACAAAAGCAAATCCAGCCAGCTGAGGGACCTCAGGAAGTTTATCGACCGTCTCGACAACATCATGATTGACCGCCAGGACCGATACAAAACACTGCGAAAGTCGCTTTCTGTAAGGTGCAAGCTGTACTTCAACAACTTCATGATCCAGCTGCACTGCTGTGGCTCTATGATGTTTGACCACAACAATGAAACGCTGTCCATTTCTGTGAAGCCGCCTGGTCAGGAGATGAACAGCGTCAGTGACATGCGCTCTCTCTCGGGCGGTGAACGCTCCTTCTCCACCGTCTGCTTTATTCTGGCACTCTGGGAAATCACAGAGTCTCCTTTCCGCTGCCTGGACGAGTTTGATGTTTACATGGACATGCACAATCGCAGCATTTCAATGAACATGCTTGTGGCACTTTCCGAGCGTCAACATCTGCGGCAGTTCATCTTCATCACCCCTCAGTCTATCAGCCAACTTCCTAAAAGCACCAACATCACAATCCACCAGCTTCAGGATCCAGAGAAAGACACTGAGGAGGAGTGA
>TCONS_00022413
GTTTGCATATGCGCGCTGCCTGTTCACCAGGAAGTCGTCAAAACATTTTGCGTTTACTTTCCATATGCAGGGGAATGGATTTGGACATCTCTCTGCCATGAATAAGAGGAAATCTGGTGTTCACAATGCTGTAAAACCATCGAAGACCCCTCGGACTGATGGTAAAACTCATGTGTTGGAGGAGGAGGATGTTGATGAGGAGGATGGAGCCCTTCAAGATCATCTTTCTGCTTCGAATGTCGGAGATATCGGTGTGATAGAAAGTATAACTTTGAGGAACTTCATGAGCCACCATTTGCTTGGACCTTTAAAATTTGGAGCAAATGTCAACTTCATTGTTGGAAACAATGGAACTGGGAAAAGTGCCATTCTGACAGCTCTTATAGTGGGTCTCGGTGGAAAAGCAACTACAACTAATAGAGGAACGTCTTTGAAAGGTTTTGTGAAATATGGAGAGACTTCTACAGACattaaagtgaaattaaaaaacCGAGGAAATGACCCCTATAAAGGGGATGTTTATGGAGACAGCATCTGCATTGAACATCGGATCACAAGTGATGGATGCAGGACTTGTAAGATCAAGAATAAAGCAGggCATGTGGTTTCCACTAAGAAGGAGGAGTTGACTGCAATACTGGACCATTTTGGAATCCAGGTTGACAATCCTGTGTCTGTCCTTAACCAAGAAATGAGTAAACAATTCCTGCATTCGAAAAGTGAAGCGGACAAATACAGGTTTTTCATGAAAGCTACTCTTCTGGAGCAAATGAAAAGAGACTACATTCACATCAAGCAGACTAAAGCCGTGACACGAGACCAGGTGGAAAGACAAGAGGAGTGTCTCAGAGATCTCAGGCAGTTATTCTTGCAGAGGAAAGAAAGATATGAGCGCATGTCGTCTCTGGATGATATGAGACAGACTCTGGAGGACCTGAAAAAGAAGATGGCGTGGTCTTTGgtgagagagaaagagagtcaaGTTGAACAGCTGAAGGAACAAATCGAAAAAGAAGATGCTGattgtaaacatgaagaaaaGCTGCAGCTCTGTCAGAACAAAGTTGCTGTTGCTGAGAAGAAACTGCAGGACAGCCAGAAACATCTGTGTACGCTTCGAGAGGAGCAGGAACATCTCACAGAGGAGAGCCGGAAAATGAAGGAGGAAATTAAAgtcaaaacaaaagcacagaaaAGCCAGGAGGTGGTTTACTTCCGCGCTGAGAATAAATTGAAACAGTTAAAAAAGGAGCAATGCCTTCTTCAGGAGAGAATTCACAAAATAAGTCATGGCAGCAGAAACCGCCAAGAGGCCGAGCACATGCagcatcttaaaaaaatatctgccTTGAAAAACCAGCTGGAAAAGCTTGAGACAGAGTCCAGAGCTCTGAATCAAGAGATTAAGGACAGACAACAAGCTCTACATAAAGGAAGAGAGGAATACGATAAACTCAGcATGGAGGAAAAGAACATAAAAGCCTCTCTGGAGTCCAAATCGAAGAGAAAAAAGCAGCTGATGGCCAGCAGATCTAACAGACTGAGGCGGTTTGGTGATCACATGCCAGAATTGATGGAGTCCATCAACAAAGCCTTCGCTCAGGGGCGATTCAAGAAGAAACCTGTGGGACCAATAGGTGCATGCATCAGTCTAAAAGATCCCACTTTAACCTTGGCTGTAGAGTGTTGCTTAGGATTTTTTTTGAAAAGCTTTTGCTGTGACAATTACAAGGATGAAAAAGTCCTTCAGGGATTGATGTCGCAGTATTTCTACAAAGGCAACAGGCCTCAGATAATGGTGTGTCCATTCACAGACCATGTTTATAATCTTCAAGGCCGTGGAGTCCATCATCCTGAGTTTCCATCAGTGCTGGACTGCCTTAATATCGAGAACCCGGTCATAGCAAACTGTCTTATTGACATGAGGAGCATTGAGAGCATTCTGGTCATCAGAGAAAAAGCTCGTGCCAGGAAGGTCATGCAGGGCTCAAGACCACCAAAGAATTGCCGCGAGGCCTTCACTGCAGATGGTGATCAGGTTTTCACCAATCGCTATTACACCCCTGAACATGAAGTTCTGGTCAAATATCTTGGTGGAGACCCAGAAGCAGAAATAAGTCTAGTGAAcggagagctggagaacattcagGCTCAGCTTTTACGCTTCCAGCTTCACTCCTGCTCTGTGAAGGAGGACATTCAGCTCATGGAGGAGAAATTGCGTAGTGTTATCATGGCCTGCAAAAAGAATCAGgAGAGTATAAATAAGGTTAAAGCTTCGATAACAGAACTTGAGAACATTGAGGAGGCGCAGGATGAGGACATCAGCTCTCTGGAGGAAGAGGCTCAAGAGAACGAGCAGAAGATCGAATTGGAGAAGAGAATCGTGAAAGAGGCTGAAGATGAACTCCGAAAACATGAGAAAGGGCTCTTGGCTGTCAATCAGAAATTCAAAGATGTGAAATGTAAAATGGAGAAACTGTCAGATGAGATGGAGCAGCTGAAGGAGGAGCAAGTGAAGGCAGAAACTGTTTGCAACAAACTTGATCAAACCATGAAGACCTTGGAGAAGAAACTCAAGGATCATCAGAACAACATTCAGAGCATGAAAGAAGATTTGTCCCTCCAAGAGGAAGACTTGCGGGATTGTGAAGCCAAAGCCCGAGAGCTGTGTCCTGAGCGCCAGCAGGTTGATCAGAGTCCCAGAAGCATTGATGTGGAGATCACACGCCTGCGACAGAAAATCAAAACGCAAGAGAACAGTCACGGCGATAAGGAGCAAATTATCCGGGAGTATGCGGAGGCTCACAGTAATTACAAAAGCAAATCCAGCCAGCTGAGGGACCTCAGGAAGTTTATCGACCGTCTCGACAACATCATGATTGACCGCCAGGACCGATACAAAACACTGCGAAAGTCGCTTTCTGTAAGGTGCAAGCTGTACTTCAACAACTTCATGATCCAGCTGCACTGCTGTGGCTCTATGATGTTTGACCACAACAATGAAACGCTGTCCATTTCTGTGAAGCCGCCTGGTCAGGAGATGAACAGCGTCAGTGACATGCGCTCTCTCTCGGGCGGTGAACGCTCCTTCTCCACCGTCTGCTTTATTCTGGCACTCTGGGAAATCACAGAGTCTCCTTTCCGCTGCCTGGACGAGTTTGATGTTTACATGGACATGCACAATCGCAGCATTTCAATGAACATGCTTGTGGCACTTTCCGAGCGTCAACATCTGCGGCAGTTCATCTTCATCACCCCTCAGTCTATCAGCCAACTTCCTAAAAGCACCAACATCACAATCCACCAGCTTCAGGATCCAGAGAAAGACACTGAGGAGGAGTGAGAAGTACATTagTGAAGCGGTTTGATGTCTTCATGACTGAAACCCACAGGAAAGTTGGAGTGAATCACTGGGGTTCACTGACTCTGAATAATCCTCAGGATCTGTGACTCAGCTGGGTTTAGTGAAGTCAACTGAAGAATACACTGAACTCAAGCCAATTACATGAGAGACGCCATAGAGAGCGACATGTGTGTCAGGTACCAGCACTCAGCCAGGCTAAATTTCAACATATTTTGCTCATTTTGG
>TCONS_00022414
TCATGATTGACCGCCAGGACCGATACAAAACACTGCGAAAGTCGCTTTCTGTAAGGTGCAAGCTGTACTTCAACAACTTCATGATCCAGCTGCACTGCTGTGGCTCTATGATGTTTGACCACAACAATGAAACGCTGTCCATTTCTGTGAAGCCGCCTGGTCAGGAGATGAACAGCGTCAGTGACATGCGCTCTCTCTCGGGCGGTGAACGCTCCTTCTCCACCGTCTGCTTTATTCTGGCACTCTGGGAAATCACAGAGTCTCCTTTCCGCTGCCTGGACGAGTTTGATGTTTACATGGACATGCACAATCGCAGCATTTCAATGAACATGCTTGTGGCACTTTCCGAGCGTCAACATCTGCGGCAGTTCATCTTCATCACCCCTCAGTCTATCAGCCAACTTCCTAAAAGCACCAACATCACAATCCACCAGCTTCAGGATCCAGAGAAAGACACTGAGGAGGAGTGAGAAGTACATTaggtacacatacacacacacacaca

Function

symbol description
smc6 Predicted to enable damaged DNA binding activity and single-stranded DNA binding activity. Predicted to be involved in double-strand break repair via homologous recombination. Predicted to be part of Smc5-Smc6 complex. Predicted to be active in nucleus and site of double-strand break. Orthologous to human SMC6 (structural maintenance of chromosomes 6).

GO: NA

KEGG:

id description
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-110303-1 Predicted to enable damaged DNA binding activity and single-stranded DNA binding activity. Predicted to be involved in double-strand break repair via homologous recombination. Predicted to be part of Smc5-Smc6 complex. Predicted to be active in nucleus and site of double-strand break. Orthologous to human SMC6 (structural maintenance of chromosomes 6).

Ensembl:

ensembl_id ENSDARG00000091821

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022412 False 3829 mRNA 0.44 25 6667441 6710892
TCONS_00022411 False 3742 mRNA 0.44 26 6667441 6710892
TCONS_00022413 False 3592 mRNA 0.45 28 6667470 6746046
TCONS_00022414 True 505 lncRNA 0.49 5 6704126 6710927

Neighbor

gene id symbol gene type direction distance location
XLOC_011223 BX005321.1 coding upstream 592 6625717 ~ 6666849 (+)
XLOC_011222 adgrf3a coding upstream 69612 6563307 ~ 6597829 (+)
XLOC_011221 slc5a6b coding upstream 108845 6535694 ~ 6558596 (+)
XLOC_011220 NA coding upstream 138898 6528023 ~ 6528543 (+)
XLOC_011219 coq8ab coding upstream 179628 6467398 ~ 6487813 (+)
XLOC_011225 afg1la coding downstream 19575 6765621 ~ 6789670 (+)
XLOC_011226 foxo3a coding downstream 46955 6793001 ~ 6810785 (+)
XLOC_011227 ccdc162 coding downstream 76291 6822337 ~ 6826156 (+)
XLOC_011228 si:ch73-242m19.1 coding downstream 82504 6828550 ~ 6932061 (+)
XLOC_011229 zgc:172341 coding downstream 210650 6956696 ~ 6971946 (+)
XLOC_011217 NA non-coding upstream 274874 6386640 ~ 6392567 (+)
XLOC_011213 NA non-coding upstream 456169 6208159 ~ 6211272 (+)
XLOC_011208 CU929322.1 non-coding upstream 829747 5837308 ~ 5837694 (+)
XLOC_011202 FO082819.1 non-coding upstream 1796919 4870403 ~ 4870522 (+)
XLOC_011230 NA non-coding downstream 480684 7226730 ~ 7229012 (+)
XLOC_011231 CABZ01057751.1 non-coding downstream 573996 7320042 ~ 7320165 (+)
XLOC_011232 NA non-coding downstream 700463 7446509 ~ 7446781 (+)
XLOC_011238 BX511121.2 non-coding downstream 915162 7661208 ~ 7661324 (+)
XLOC_011239 BX088649.1 non-coding downstream 995570 7741616 ~ 7747160 (+)

Expression


Co-expression Network