G328601


Basic Information

Item Value
gene id G328601
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1443081 ~ 1443414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU373485
AATCAGTTGAGAAAAACTGTAATGCCCTGTCCAAATACCCACACTTGCGGTCTTTGCACTTGACCACTCGTCTACTTACATGACGCATTTCCTTTATTTGGCTCAAATATTCAAGTAGGCGTGAAGACCGCAAGTGTGTGTAGAACTTTTGATTACCCGATGGGACACACTTATAGTCTTGCAAAAAATGCAAGTTTACTAAGCTTTTTTATTATTATTAATTTTATTTTTAATACTTTGCATTTTAAAACACACTTCTAAATGTCTGTTCAGTAGTCGCTATGTAACTAACAGAAGACTTCTAATTAAGTGATAAAAAGCAGTTGCAAATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373485 True 334 lncRNA 0.34 1 1443081 1443414

Neighbor

gene id symbol gene type direction distance location
CI01000112_01304699_01321467 NA coding upstream 121373 1304303 ~ 1321708 (+)
CI01000112_00975908_00994568 RHOT1B, RHOT1, RHOT1A coding upstream 447016 975908 ~ 996065 (+)
CI01000112_00967726_00973214 NA coding upstream 469602 967726 ~ 973479 (+)
CI01000112_00943876_00960636 NA coding upstream 482445 943876 ~ 960636 (+)
CI01000112_00931318_00942127 SUZ12B, SUZ12 coding upstream 500696 931147 ~ 942385 (+)
CI01000112_01473681_01484126 NA coding downstream 29943 1473357 ~ 1484634 (+)
CI01000112_01493953_01497856 NA coding downstream 50539 1493953 ~ 1498684 (+)
CI01000112_01534218_01550547 MGAT5B coding downstream 90804 1534218 ~ 1550876 (+)
CI01000112_01711753_01717045 NA coding downstream 267818 1711232 ~ 1717114 (+)
CI01000112_01753138_01753764 NA coding downstream 309542 1752956 ~ 1754407 (+)
G328600 NA non-coding upstream 9209 1433393 ~ 1433872 (+)
G328599 NA non-coding upstream 10041 1432523 ~ 1433040 (+)
G328474 NA non-coding upstream 97043 1345360 ~ 1346038 (+)
G328520 NA non-coding upstream 103216 1339535 ~ 1339865 (+)
G328473 NA non-coding upstream 120382 1322069 ~ 1322699 (+)
G328608 NA non-coding downstream 17511 1460925 ~ 1461211 (+)
G328609 NA non-coding downstream 17988 1461402 ~ 1461609 (+)
G328611 NA non-coding downstream 22618 1466032 ~ 1466309 (+)
G328612 NA non-coding downstream 23283 1466697 ~ 1466920 (+)
G328588 NA non-coding downstream 111197 1554611 ~ 1555332 (+)
G328456 NA other upstream 209963 1232022 ~ 1233118 (+)
G329125 NA other downstream 1174290 2617704 ~ 2618151 (+)
G329194 NA other downstream 1476840 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 3641306 5076817 ~ 5101845 (+)

Expression


Co-expression Network